{"sha": "c33806c9ee11db205ee8c02a42e31b1c3128e299", "data": {"nexml": {"@about": "#study", "@generator": "Open Tree API", "@id": "study", "@nexml2json": "1.2.1", "@nexmljson": "http://purl.org/opentree/nexson", "@version": "0.9", "@xmlns": {"$": "http://www.nexml.org/2009", "nex": "http://www.nexml.org/2009", "ot": "http://purl.org/opentree-terms#", "xhtml": "http://www.w3.org/1999/xhtml/vocab#", "xsd": "http://www.w3.org/2001/XMLSchema#", "xsi": "http://www.w3.org/2001/XMLSchema-instance"}, "^ot:agents": {"agent": [{"@description": "Open Tree NexSON validation", "@id": "peyotl-validator", "@name": "api.opentreeoflife.org/validate", "@url": "https://github.com/OpenTreeOfLife/peyotl", "@version": "0.0.4a", "invocation": {"commandLine": [], "otherProperty": [{"name": "pythonVersion", "value": "2.7.9"}, {"name": "pythonImplementation", "value": "CPython"}]}}, {"@description": "Web-based interface for submitting, editing, and reviewing studies in the Open Tree of Life project.", "@id": "opentree-curation-webapp", "@name": "OpenTree curation webapp", "@url": "https://github.com/OpenTreeOfLife/opentree", "@version": "0.0.0"}]}, "^ot:annotationEvents": {"annotation": [{"@dateCreated": "2017-02-24T22:38:20.380Z", "@description": "Aids for mapping study OTUs to OTT taxa", "@id": "otu-mapping-hints", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "OTU_MAPPING_HINTS", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"searchContext": {"$": "Arthropods"}, "substitutions": {"substitution": [{"@active": false, "@valid": true, "new": {"$": ""}, "old": {"$": ""}}]}, "useFuzzyMatching": true}, "refersTo": {"@top": {"$": "meta"}}}]}, {"@dateCreated": "2017-02-24T22:38:20.380Z", "@description": "Describes supporting data files for this study", "@id": "supporting-files-metadata", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "SUPPORTING_FILE_INFO", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"@movedToPermanentArchive": false, "files": {"file": [{"@filename": "Oakley_etal_2013.trees.nex", "@size": 1538, "@type": "nexus", "@url": "/curator/download/supporting_files.doc.affd4570ba736f30.4f616b6c65795f6574616c5f323031332e74726565732e6e6578.nex", "description": {"$": "Source data for tree(s) 'tree1'"}, "sourceForTree": [{"$": "tree1"}]}, {"@filename": "PASTED.tre", "@size": 3322, "@type": "newick", "@url": "/curator/download/supporting_files.doc.980d296be07af9bd.5041535445442e747265.tre", "description": {"$": "Source data for tree(s) 'tree2'"}, "sourceForTree": [{"$": "tree2"}]}]}}, "refersTo": {"@top": {"$": "meta"}}}]}, {"@id": "peyotl-validator-event", "@description": "Open Tree NexSON validation", "@wasAssociatedWithAgentId": "peyotl-validator", "@passedChecks": true, "@preserve": false, "message": [{"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge100", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge100"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge103", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge103"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge104", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge104"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge106", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge106"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge107", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge107"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge108", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge108"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge111", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge111"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge113", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge113"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge114", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge114"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge115", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge115"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge117", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge117"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge120", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge120"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge121", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge121"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge122", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge122"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge124", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge124"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge126", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge126"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge129", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge129"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge131", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge131"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge135", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge135"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge136", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge136"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge138", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge138"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge139", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge139"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge141", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge141"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge144", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge144"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge146", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge146"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge148", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge148"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge149", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge149"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge150", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge150"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge151", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge151"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge154", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge154"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge155", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge155"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge158", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge158"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge162", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge162"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge164", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge164"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge168", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge168"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge169", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge169"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge171", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge171"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge174", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge174"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge177", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge177"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge179", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge179"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge180", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge180"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge181", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge181"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge182", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge182"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge186", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge186"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge188", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge188"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge189", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge189"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge95", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge95"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge97", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge97"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:bootstrapValues"], "refersTo": {"@top": "trees", "@idref": "edge98", "@treesID": "trees1", "@treeID": "tree2", "@edgeID": "edge98"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "node96", "@treesID": "trees1", "@treeID": "tree2", "@nodeID": "node96"}, "@severity": "WARNING"}, {"@code": "MULTIPLE_TIPS_MAPPED_TO_OTT_ID", "data": ["otu58", "otu59"], "refersTo": {"@top": "otus", "@idref": "otus1", "@otusID": "otus1"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:comment"], "refersTo": {"@top": "nexml", "@idref": "study"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:nodeLabelMode", "^ot:nodeLabelTimeUnit", "^ot:reasonsToExcludeFromSynthesis"], "refersTo": {"@top": "trees", "@idref": "tree1", "@treesID": "trees1", "@treeID": "tree1"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:nodeLabelDescription", "^ot:nodeLabelMode", "^ot:nodeLabelTimeUnit", "^ot:reasonsToExcludeFromSynthesis"], "refersTo": {"@top": "trees", "@idref": "tree2", "@treesID": "trees1", "@treeID": "tree2"}, "@severity": "WARNING"}]}]}, "^ot:candidateTreeForSynthesis": [], "^ot:comment": "", "^ot:curatorName": ["jbernot", "ostratodd"], "^ot:dataDeposit": {"@href": "http://dx.doi.org/10.5061/dryad.tb40v"}, "^ot:focalClade": 985906, "^ot:focalCladeOTTTaxonName": "Pancrustacea", "^ot:otusElementOrder": ["otus1"], "^ot:studyId": "ot_1047", "^ot:studyPublication": {"@href": "http://dx.doi.org/10.1093/molbev/mss216"}, "^ot:studyPublicationReference": "T. H. Oakley, J. M. Wolfe, A. R. Lindgren, A. K. Zaharoff, 2012, 'Phylotranscriptomics to Bring the Understudied into the Fold: Monophyletic Ostracoda, Fossil Placement, and Pancrustacean Phylogeny', Molecular Biology and Evolution, vol. 30, no. 1, pp. 215-233", "^ot:studyYear": 2012, "^ot:tag": [], "^ot:treesElementOrder": ["trees1"], "^xhtml:license": {"@href": "http://creativecommons.org/publicdomain/zero/1.0/", "@name": "CC0"}, "otusById": {"otus1": {"otuById": {"otu1": {"^ot:originalLabel": "Limulus polyphemus", "^ot:ottId": 511973, "^ot:ottTaxonName": "Limulus polyphemus"}, "otu10": {"^ot:originalLabel": "Heterocypris sp.", "^ot:ottId": 401748, "^ot:ottTaxonName": "Heterocypris"}, "otu11": {"^ot:originalLabel": "Conchoecissa sp.", "^ot:ottId": 78344, "^ot:ottTaxonName": "Conchoecissa"}, "otu12": {"^ot:originalLabel": "Actinoseta jonesi", "^ot:ottId": 2967939, "^ot:ottTaxonName": "Actinoseta jonesi"}, "otu13": {"^ot:originalLabel": "Euphilomedes morini", "^ot:ottId": 2968502, "^ot:ottTaxonName": "Euphilomedes morini"}, "otu14": {"^ot:originalLabel": "Harbansus paucichelatus", "^ot:ottId": 113139, "^ot:ottTaxonName": "Harbansus paucichelatus"}, "otu15": {"^ot:originalLabel": "Skogsbergia lerneri", "^ot:ottId": 1087348, "^ot:ottTaxonName": "Skogsbergia lerneri"}, "otu16": {"^ot:originalLabel": "Vargula hilgendorfii", "^ot:ottId": 198818, "^ot:ottTaxonName": "Vargula hilgendorfii"}, "otu17": {"^ot:originalLabel": "Vargula tsujii", "^ot:ottId": 325005, "^ot:ottTaxonName": "Vargula tsujii"}, "otu18": {"^ot:originalLabel": "Nebalia hessleri", "^ot:ottId": 835919, "^ot:ottTaxonName": "Nebalia hessleri"}, "otu19": {"^ot:originalLabel": "Neogonodactylus oerstedii", "^ot:ottId": 311373, "^ot:ottTaxonName": "Neogonodactylus oerstedii"}, "otu2": {"^ot:originalLabel": "Scutigera coleoptrata", "^ot:ottId": 431229, "^ot:ottTaxonName": "Scutigera coleoptrata"}, "otu20": {"^ot:originalLabel": "Libinia emarginata", "^ot:ottId": 428458, "^ot:ottTaxonName": "Libinia emarginata"}, "otu21": {"^ot:originalLabel": "Armadillium vulgare", "^ot:ottId": 776700, "^ot:ottTaxonName": "Armadillidium vulgare"}, "otu22": {"^ot:originalLabel": "Loxothylacus texanus", "^ot:ottId": 579399, "^ot:ottTaxonName": "Loxothylacus texanus"}, "otu23": {"^ot:originalLabel": "Lepas anserifera", "^ot:ottId": 493488, "^ot:ottTaxonName": "Lepas anserifera"}, "otu24": {"^ot:originalLabel": "Semibalanus balanoides", "^ot:ottId": 374192, "^ot:ottTaxonName": "Semibalanus balanoides"}, "otu25": {"^ot:originalLabel": "Chthalamus fragilis", "^ot:ottId": 6742, "^ot:ottTaxonName": "Chthamalus fragilis"}, "otu26": {"^ot:originalLabel": "Eurytemora affinis", "^ot:ottId": 850982, "^ot:ottTaxonName": "Eurytemora affinis"}, "otu27": {"^ot:originalLabel": "Calanus finmarchicus", "^ot:ottId": 149532, "^ot:ottTaxonName": "Calanus finmarchicus"}, "otu28": {"^ot:originalLabel": "Lernaeocera branchialis", "^ot:ottId": 673399, "^ot:ottTaxonName": "Lernaeocera branchialis"}, "otu29": {"^ot:originalLabel": "Lepeophtheirus salmonis", "^ot:ottId": 430269, "^ot:ottTaxonName": "Lepeophtheirus salmonis"}, "otu3": {"^ot:originalLabel": "Derocheilocaris typicus", "^ot:ottId": 370883, "^ot:ottTaxonName": "Derocheilocaris typicus"}, "otu30": {"^ot:originalLabel": "Caligus rogercresseyi", "^ot:ottId": 861944, "^ot:ottTaxonName": "Caligus rogercresseyi"}, "otu31": {"^ot:originalLabel": "Mesocyclops edax", "^ot:ottId": 176565, "^ot:ottTaxonName": "Mesocyclops edax"}, "otu32": {"^ot:originalLabel": "Acanthocyclops vernalis", "^ot:ottId": 493478, "^ot:ottTaxonName": "Acanthocyclops vernalis"}, "otu33": {"^ot:originalLabel": "Hutchinsoniella macracantha", "^ot:ottId": 401741, "^ot:ottTaxonName": "Hutchinsoniella macracantha"}, "otu34": {"^ot:originalLabel": "Triops longicaudatus", "^ot:ottId": 570423, "^ot:ottTaxonName": "Triops longicaudatus"}, "otu35": {"^ot:originalLabel": "Lynceus sp.", "^ot:ottId": 950551, "^ot:ottTaxonName": "Lynceus"}, "otu36": {"^ot:originalLabel": "Limnadia lenticularis", "^ot:ottId": 401740, "^ot:ottTaxonName": "Limnadia lenticularis"}, "otu37": {"^ot:originalLabel": "Daphnia pulex", "^ot:ottId": 59086, "^ot:ottTaxonName": "Daphnia pulex"}, "otu38": {"^ot:originalLabel": "Streptocephalus seali", "^ot:ottId": 176564, "^ot:ottTaxonName": "Streptocephalus seali"}, "otu39": {"^ot:originalLabel": "Artemia salina", "^ot:ottId": 558087, "^ot:ottTaxonName": "Artemia salina"}, "otu4": {"^ot:originalLabel": "Argulus sp.", "^ot:ottId": 628405, "^ot:ottTaxonName": "Argulus"}, "otu40": {"^ot:originalLabel": "Artemia franciscana", "^ot:ottId": 59094, "^ot:ottTaxonName": "Artemia franciscana"}, "otu41": {"^ot:originalLabel": "Speleonectes tulumensis", "^ot:ottId": 1078995, "^ot:ottTaxonName": "Xibalbanus tulumensis"}, "otu42": {"^ot:originalLabel": "Eumescocampa frigilis", "^ot:ottId": 758800, "^ot:ottTaxonName": "Eumesocampa frigilis"}, "otu43": {"^ot:originalLabel": "Periplaneta americana", "^ot:ottId": 48288, "^ot:ottTaxonName": "Periplaneta americana"}, "otu44": {"^ot:originalLabel": "Tribolium castaneum", "^ot:ottId": 148904, "^ot:ottTaxonName": "Tribolium castaneum"}, "otu45": {"^ot:originalLabel": "Drosophila melanogaster", "^ot:ottId": 505714, "^ot:ottTaxonName": "Drosophila melanogaster"}, "otu46": {"^ot:originalLabel": "Bombyx mori", "^ot:ottId": 440274, "^ot:ottTaxonName": "Bombyx mori"}, "otu47": {"^ot:originalLabel": "Apis mellifera", "^ot:ottId": 461645, "^ot:ottTaxonName": "Apis mellifera (species in domain Eukaryota)"}, "otu48": {"^ot:originalLabel": "Acyrthosiphon pisum", "^ot:ottId": 814484, "^ot:ottTaxonName": "Acyrthosiphon pisum"}, "otu5": {"^ot:originalLabel": "Armillifer armillatus", "^ot:ottId": 346937, "^ot:ottTaxonName": "Armillifer armillatus"}, "otu51": {"^ot:originalLabel": "Argulus sp", "^ot:ottId": 628405, "^ot:ottTaxonName": "Argulus"}, "otu53": {"^ot:originalLabel": "Manawa staceyi", "^ot:ottId": 113140, "^ot:ottTaxonName": "Manawa staceyi"}, "otu54": {"^ot:originalLabel": "Neonesidea oligodentata", "^ot:ottId": 2961035, "^ot:ottTaxonName": "Neonesidea oligodentata"}, "otu55": {"^ot:originalLabel": "Neonesidea sp", "^ot:ottId": 358955, "^ot:ottTaxonName": "Neonesidea"}, "otu56": {"^ot:originalLabel": "Terrestricythere pratensis", "^ot:ottId": 4678925, "^ot:ottTaxonName": "Terrestricythere pratensis"}, "otu57": {"^ot:originalLabel": "Pontocypris mytiloides", "^ot:ottId": 563187, "^ot:ottTaxonName": "Pontocypris mytiloides"}, "otu58": {"^ot:originalLabel": "Propontocypris sp1", "^ot:ottId": 499569, "^ot:ottTaxonName": "Propontocypris"}, "otu59": {"^ot:originalLabel": "Propontocypris sp2", "^ot:ottId": 499569, "^ot:ottTaxonName": "Propontocypris"}, "otu6": {"^ot:originalLabel": "Cytherelloides californica", "^ot:ottId": 5093185, "^ot:ottTaxonName": "Cytherelloidea californica"}, "otu60": {"^ot:originalLabel": "Heterocypris sp", "^ot:ottId": 401748, "^ot:ottTaxonName": "Heterocypris"}, "otu61": {"^ot:originalLabel": "Candona holzkampfi", "^ot:ottId": 129883, "^ot:ottTaxonName": "Candona holzkampfi"}, "otu62": {"^ot:originalLabel": "Ilyocypris japonica", "^ot:ottId": 499573, "^ot:ottTaxonName": "Ilyocypris japonica"}, "otu63": {"^ot:originalLabel": "Ilyocypris sp", "^ot:ottId": 499572, "^ot:ottTaxonName": "Ilyocypris"}, "otu65": {"^ot:originalLabel": "Cypridopsis sp", "^ot:ottId": 687310, "^ot:ottTaxonName": "Cypridopsis"}, "otu66": {"^ot:originalLabel": "Cypridopsis japonica", "^ot:ottId": 622549, "^ot:ottTaxonName": "Cypridopsis japonica"}, "otu67": {"^ot:originalLabel": "Macrocypris sp", "^ot:ottId": 110508, "^ot:ottTaxonName": "Macrocypris"}, "otu68": {"^ot:originalLabel": "Kotoracythere inconspicua", "^ot:ottId": 632224, "^ot:ottTaxonName": "Kotoracythere inconspicua"}, "otu69": {"^ot:originalLabel": "Cytheropteron subuchioi", "^ot:ottId": 736378, "^ot:ottTaxonName": "Cytheropteron subuchioi"}, "otu7": {"^ot:originalLabel": "Vestalenula sp.", "^ot:ottId": 42910, "^ot:ottTaxonName": "Vestalenula"}, "otu70": {"^ot:originalLabel": "Paradoxostoma setoense", "^ot:ottId": 212758, "^ot:ottTaxonName": "Paradoxostoma setoense"}, "otu71": {"^ot:originalLabel": "Paradoxostoma sp", "^ot:ottId": 212761, "^ot:ottTaxonName": "Paradoxostoma"}, "otu72": {"^ot:originalLabel": "Loxocorniculum mutsuense", "^ot:ottId": 736383, "^ot:ottTaxonName": "Loxocorniculum mutsuense"}, "otu73": {"^ot:originalLabel": "Ishizakiella miurensis", "^ot:ottId": 161583, "^ot:ottTaxonName": "Ishizakiella miurensis"}, "otu74": {"^ot:originalLabel": "Parakrithella pseudadonta", "^ot:ottId": 1004748, "^ot:ottTaxonName": "Parakrithella pseudadonta"}, "otu75": {"^ot:originalLabel": "Neomonoceratina microreticulata", "^ot:ottId": 1004743, "^ot:ottTaxonName": "Neomonoceratina microreticulata"}, "otu76": {"^ot:originalLabel": "Perissocytheridea japonica", "^ot:ottId": 427836, "^ot:ottTaxonName": "Perissocytheridea japonica"}, "otu77": {"^ot:originalLabel": "Pontocythere subjaponica", "^ot:ottId": 1004749, "^ot:ottTaxonName": "Pontocythere subjaponica"}, "otu78": {"^ot:originalLabel": "Aurila disparata", "^ot:ottId": 427841, "^ot:ottTaxonName": "Aurila disparata"}, "otu79": {"^ot:originalLabel": "Puriana sp", "^ot:ottId": 2964865, "^ot:ottTaxonName": "Puriana"}, "otu8": {"^ot:originalLabel": "Puriana sp.", "^ot:ottId": 2964865, "^ot:ottTaxonName": "Puriana"}, "otu80": {"^ot:originalLabel": "Cythere lutea", "^ot:ottId": 684630, "^ot:ottTaxonName": "Cythere lutea"}, "otu81": {"^ot:originalLabel": "Limnocythere sp", "^ot:ottId": 684634, "^ot:ottTaxonName": "Limnocythere"}, "otu82": {"^ot:originalLabel": "Xestoleberis sp", "^ot:ottId": 161585, "^ot:ottTaxonName": "Xestoleberis"}, "otu83": {"^ot:originalLabel": "Xestoleberis hanaii", "^ot:ottId": 161586, "^ot:ottTaxonName": "Xestoleberis hanaii"}, "otu84": {"^ot:originalLabel": "Bythoceratina hanejiensis", "^ot:ottId": 110503, "^ot:ottTaxonName": "Bythoceratina hanejiensis"}, "otu85": {"^ot:originalLabel": "Darwinula sp", "^ot:ottId": 230307, "^ot:ottTaxonName": "Darwinula"}, "otu86": {"^ot:originalLabel": "Darwinula stevensoni", "^ot:ottId": 230308, "^ot:ottTaxonName": "Darwinula stevensoni"}, "otu87": {"^ot:originalLabel": "Vestalenula sp", "^ot:ottId": 42910, "^ot:ottTaxonName": "Vestalenula"}, "otu88": {"^ot:originalLabel": "Cytherelloidea californica", "^ot:ottId": 5093185, "^ot:ottTaxonName": "Cytherelloidea californica"}, "otu89": {"^ot:originalLabel": "Cytherelloidea sp", "^ot:ottId": 5264007, "^ot:ottTaxonName": "Cytherelloidea (superfamily worms:763553)"}, "otu9": {"^ot:originalLabel": "Cypridopsis vidua", "^ot:ottId": 52512, "^ot:ottTaxonName": "Cypridopsis vidua"}, "otu90": {"^ot:originalLabel": "Conchoecissa sp", "^ot:ottId": 78344, "^ot:ottTaxonName": "Conchoecissa"}, "otu95": {"^ot:originalLabel": "Rutiderma apex", "^ot:ottId": 634813, "^ot:ottTaxonName": "Rutiderma apex"}, "otu97": {"^ot:originalLabel": "Eusarsiella sp", "^ot:ottId": 687304, "^ot:ottTaxonName": "Eusarsiella"}}}}, "treesById": {"trees1": {"@otus": "otus1", "^ot:treeElementOrder": ["tree1", "tree2"], "treeById": {"tree1": {"@label": "Fig. 1", "@xsi:type": "nex:FloatTree", "^ot:branchLengthDescription": "", "^ot:branchLengthMode": "ot:undefined", "^ot:branchLengthTimeUnit": "", "^ot:curatedType": "Maximum likelihood ", "^ot:inGroupClade": "node3", "^ot:nodeLabelMode": "", "^ot:nodeLabelTimeUnit": "", "^ot:outGroupEdge": "", "^ot:reasonsToExcludeFromSynthesis": [], "^ot:rootNodeId": "node1", "^ot:specifiedRoot": "node1", "^ot:tag": [], "^ot:unrootedTree": false, "edgeBySourceId": {"node1": {"edge1": {"@source": "node1", "@target": "node2"}, "edge94": {"@source": "node1", "@target": "node95"}}, "node14": {"edge14": {"@source": "node14", "@target": "node15"}, "edge17": {"@source": "node14", "@target": "node18"}}, "node15": {"edge15": {"@source": "node15", "@target": "node16"}, "edge16": {"@source": "node15", "@target": "node17"}}, "node18": {"edge18": {"@source": "node18", "@target": "node19"}, "edge21": {"@source": "node18", "@target": "node22"}}, "node19": {"edge19": {"@source": "node19", "@target": "node20"}, "edge20": {"@source": "node19", "@target": "node21"}}, "node2": {"edge2": {"@source": "node2", "@target": "node3"}, "edge93": {"@source": "node2", "@target": "node94"}}, "node22": {"edge22": {"@source": "node22", "@target": "node23"}, "edge23": {"@source": "node22", "@target": "node24"}}, "node24": {"edge24": {"@source": "node24", "@target": "node25"}, "edge25": {"@source": "node24", "@target": "node26"}}, "node27": {"edge27": {"@source": "node27", "@target": "node28"}, "edge28": {"@source": "node27", "@target": "node29"}}, "node29": {"edge29": {"@source": "node29", "@target": "node30"}, "edge30": {"@source": "node29", "@target": "node31"}}, "node3": {"edge3": {"@source": "node3", "@target": "node4"}, "edge64": {"@source": "node3", "@target": "node65"}}, "node31": {"edge31": {"@source": "node31", "@target": "node32"}, "edge32": {"@source": "node31", "@target": "node33"}}, "node34": {"edge34": {"@source": "node34", "@target": "node35"}, "edge49": {"@source": "node34", "@target": "node50"}}, "node35": {"edge35": {"@source": "node35", "@target": "node36"}, "edge36": {"@source": "node35", "@target": "node37"}}, "node37": {"edge37": {"@source": "node37", "@target": "node38"}, "edge42": {"@source": "node37", "@target": "node43"}}, "node38": {"edge38": {"@source": "node38", "@target": "node39"}, "edge39": {"@source": "node38", "@target": "node40"}}, "node4": {"edge33": {"@source": "node4", "@target": "node34"}, "edge4": {"@source": "node4", "@target": "node5"}}, "node40": {"edge40": {"@source": "node40", "@target": "node41"}, "edge41": {"@source": "node40", "@target": "node42"}}, "node43": {"edge43": {"@source": "node43", "@target": "node44"}, "edge44": {"@source": "node43", "@target": "node45"}}, "node45": {"edge45": {"@source": "node45", "@target": "node46"}, "edge46": {"@source": "node45", "@target": "node47"}}, "node47": {"edge47": {"@source": "node47", "@target": "node48"}, "edge48": {"@source": "node47", "@target": "node49"}}, "node5": {"edge26": {"@source": "node5", "@target": "node27"}, "edge5": {"@source": "node5", "@target": "node6"}}, "node50": {"edge50": {"@source": "node50", "@target": "node51"}, "edge51": {"@source": "node50", "@target": "node52"}}, "node52": {"edge52": {"@source": "node52", "@target": "node53"}, "edge53": {"@source": "node52", "@target": "node54"}}, "node54": {"edge54": {"@source": "node54", "@target": "node55"}, "edge55": {"@source": "node54", "@target": "node56"}}, "node56": {"edge56": {"@source": "node56", "@target": "node57"}, "edge57": {"@source": "node56", "@target": "node58"}}, "node58": {"edge58": {"@source": "node58", "@target": "node59"}, "edge59": {"@source": "node58", "@target": "node60"}}, "node6": {"edge13": {"@source": "node6", "@target": "node14"}, "edge6": {"@source": "node6", "@target": "node7"}}, "node60": {"edge60": {"@source": "node60", "@target": "node61"}, "edge61": {"@source": "node60", "@target": "node62"}}, "node62": {"edge62": {"@source": "node62", "@target": "node63"}, "edge63": {"@source": "node62", "@target": "node64"}}, "node65": {"edge65": {"@source": "node65", "@target": "node66"}, "edge70": {"@source": "node65", "@target": "node71"}}, "node66": {"edge66": {"@source": "node66", "@target": "node67"}, "edge67": {"@source": "node66", "@target": "node68"}}, "node68": {"edge68": {"@source": "node68", "@target": "node69"}, "edge69": {"@source": "node68", "@target": "node70"}}, "node7": {"edge12": {"@source": "node7", "@target": "node13"}, "edge7": {"@source": "node7", "@target": "node8"}}, "node71": {"edge71": {"@source": "node71", "@target": "node72"}, "edge80": {"@source": "node71", "@target": "node81"}}, "node72": {"edge72": {"@source": "node72", "@target": "node73"}, "edge77": {"@source": "node72", "@target": "node78"}}, "node73": {"edge73": {"@source": "node73", "@target": "node74"}, "edge74": {"@source": "node73", "@target": "node75"}}, "node75": {"edge75": {"@source": "node75", "@target": "node76"}, "edge76": {"@source": "node75", "@target": "node77"}}, "node78": {"edge78": {"@source": "node78", "@target": "node79"}, "edge79": {"@source": "node78", "@target": "node80"}}, "node8": {"edge11": {"@source": "node8", "@target": "node12"}, "edge8": {"@source": "node8", "@target": "node9"}}, "node81": {"edge81": {"@source": "node81", "@target": "node82"}, "edge82": {"@source": "node81", "@target": "node83"}}, "node83": {"edge83": {"@source": "node83", "@target": "node84"}, "edge84": {"@source": "node83", "@target": "node85"}}, "node85": {"edge85": {"@source": "node85", "@target": "node86"}, "edge88": {"@source": "node85", "@target": "node89"}}, "node86": {"edge86": {"@source": "node86", "@target": "node87"}, "edge87": {"@source": "node86", "@target": "node88"}}, "node89": {"edge89": {"@source": "node89", "@target": "node90"}, "edge90": {"@source": "node89", "@target": "node91"}}, "node9": {"edge10": {"@source": "node9", "@target": "node11"}, "edge9": {"@source": "node9", "@target": "node10"}}, "node91": {"edge91": {"@source": "node91", "@target": "node92"}, "edge92": {"@source": "node91", "@target": "node93"}}}, "nodeById": {"node1": {"@root": true}, "node10": {"@otu": "otu25"}, "node11": {"@otu": "otu24"}, "node12": {"@otu": "otu23"}, "node13": {"@otu": "otu22"}, "node14": {}, "node15": {}, "node16": {"@otu": "otu26"}, "node17": {"@otu": "otu27"}, "node18": {}, "node19": {}, "node2": {}, "node20": {"@otu": "otu31"}, "node21": {"@otu": "otu32"}, "node22": {}, "node23": {"@otu": "otu28"}, "node24": {}, "node25": {"@otu": "otu29"}, "node26": {"@otu": "otu30"}, "node27": {}, "node28": {"@otu": "otu18"}, "node29": {}, "node3": {}, "node30": {"@otu": "otu19"}, "node31": {}, "node32": {"@otu": "otu20"}, "node33": {"@otu": "otu21"}, "node34": {}, "node35": {}, "node36": {"@otu": "otu33"}, "node37": {}, "node38": {}, "node39": {"@otu": "otu38"}, "node4": {}, "node40": {}, "node41": {"@otu": "otu40"}, "node42": {"@otu": "otu39"}, "node43": {}, "node44": {"@otu": "otu34"}, "node45": {}, "node46": {"@otu": "otu35"}, "node47": {}, "node48": {"@otu": "otu37"}, "node49": {"@otu": "otu36"}, "node5": {}, "node50": {}, "node51": {"@otu": "otu41"}, "node52": {}, "node53": {"@otu": "otu42"}, "node54": {}, "node55": {"@otu": "otu48"}, "node56": {}, "node57": {"@otu": "otu43"}, "node58": {}, "node59": {"@otu": "otu47"}, "node6": {}, "node60": {}, "node61": {"@otu": "otu44"}, "node62": {}, "node63": {"@otu": "otu45"}, "node64": {"@otu": "otu46"}, "node65": {}, "node66": {}, "node67": {"@otu": "otu3"}, "node68": {}, "node69": {"@otu": "otu4"}, "node7": {}, "node70": {"@otu": "otu5"}, "node71": {}, "node72": {}, "node73": {}, "node74": {"@otu": "otu8"}, "node75": {}, "node76": {"@otu": "otu10"}, "node77": {"@otu": "otu9"}, "node78": {}, "node79": {"@otu": "otu6"}, "node8": {}, "node80": {"@otu": "otu7"}, "node81": {}, "node82": {"@otu": "otu11"}, "node83": {}, "node84": {"@otu": "otu12"}, "node85": {}, "node86": {}, "node87": {"@otu": "otu13"}, "node88": {"@otu": "otu14"}, "node89": {}, "node9": {}, "node90": {"@otu": "otu15"}, "node91": {}, "node92": {"@otu": "otu16"}, "node93": {"@otu": "otu17"}, "node94": {"@otu": "otu2"}, "node95": {"@otu": "otu1"}}}, "tree2": {"@label": "Figure 3", "@xsi:type": "nex:FloatTree", "^ot:branchLengthDescription": "", "^ot:branchLengthMode": "ot:substitutionCount", "^ot:branchLengthTimeUnit": "", "^ot:curatedType": "Maximum likelihood ", "^ot:inGroupClade": "node105", "^ot:nodeLabelDescription": "", "^ot:nodeLabelMode": "ot:bootstrapValues", "^ot:nodeLabelTimeUnit": "", "^ot:outGroupEdge": "", "^ot:reasonsToExcludeFromSynthesis": [], "^ot:rootNodeId": "node96", "^ot:specifiedRoot": "node96", "^ot:tag": [], "^ot:unrootedTree": false, "edgeBySourceId": {"node100": {"edge100": {"@length": 0.038016, "@source": "node100", "@target": "node102", "^ot:bootstrapValues": 0.99}, "edge99": {"@length": 0.176823, "@source": "node100", "@target": "node101"}}, "node102": {"edge101": {"@length": 0.164789, "@source": "node102", "@target": "node103"}, "edge102": {"@length": 0.274932, "@source": "node102", "@target": "node104"}}, "node105": {"edge104": {"@length": 0.011536, "@source": "node105", "@target": "node106", "^ot:bootstrapValues": 0.89}, "edge177": {"@length": 0.045687, "@source": "node105", "@target": "node179", "^ot:bootstrapValues": 1}}, "node106": {"edge105": {"@length": 0.388585, "@source": "node106", "@target": "node107"}, "edge106": {"@length": 0.028867, "@source": "node106", "@target": "node108", "^ot:bootstrapValues": 1}}, "node108": {"edge107": {"@length": 0.015556, "@source": "node108", "@target": "node109", "^ot:bootstrapValues": 0.99}, "edge168": {"@length": 0.017557, "@source": "node108", "@target": "node170", "^ot:bootstrapValues": 0.95}}, "node109": {"edge108": {"@length": 0.058903, "@source": "node109", "@target": "node110", "^ot:bootstrapValues": 1}, "edge111": {"@length": 0.003355, "@source": "node109", "@target": "node113", "^ot:bootstrapValues": 0.24}}, "node110": {"edge109": {"@length": 0.021103, "@source": "node110", "@target": "node111"}, "edge110": {"@length": 0.02592, "@source": "node110", "@target": "node112"}}, "node113": {"edge112": {"@length": 0.078073, "@source": "node113", "@target": "node114"}, "edge113": {"@length": 0.003999, "@source": "node113", "@target": "node115", "^ot:bootstrapValues": 0.27}}, "node115": {"edge114": {"@length": 0.034604, "@source": "node115", "@target": "node116", "^ot:bootstrapValues": 1}, "edge135": {"@length": 0.038714, "@source": "node115", "@target": "node137", "^ot:bootstrapValues": 1}}, "node116": {"edge115": {"@length": 0.1894, "@source": "node116", "@target": "node117", "^ot:bootstrapValues": 1}, "edge120": {"@length": 0.020108, "@source": "node116", "@target": "node122", "^ot:bootstrapValues": 1}}, "node117": {"edge116": {"@length": 0.049849, "@source": "node117", "@target": "node118"}, "edge117": {"@length": 0.0275, "@source": "node117", "@target": "node119", "^ot:bootstrapValues": 0.95}}, "node119": {"edge118": {"@length": 0.061804, "@source": "node119", "@target": "node120"}, "edge119": {"@length": 0.064154, "@source": "node119", "@target": "node121"}}, "node122": {"edge121": {"@length": 0.058615, "@source": "node122", "@target": "node123", "^ot:bootstrapValues": 1}, "edge134": {"@length": 0.13637, "@source": "node122", "@target": "node136"}}, "node123": {"edge122": {"@length": 0.01783, "@source": "node123", "@target": "node124", "^ot:bootstrapValues": 0.31}, "edge129": {"@length": 0.052876, "@source": "node123", "@target": "node131", "^ot:bootstrapValues": 1}}, "node124": {"edge123": {"@length": 0.058987, "@source": "node124", "@target": "node125"}, "edge124": {"@length": 0.021518, "@source": "node124", "@target": "node126", "^ot:bootstrapValues": 0.4}}, "node126": {"edge125": {"@length": 0.175757, "@source": "node126", "@target": "node127"}, "edge126": {"@length": 0.030921, "@source": "node126", "@target": "node128", "^ot:bootstrapValues": 1}}, "node128": {"edge127": {"@length": 0.005777, "@source": "node128", "@target": "node129"}, "edge128": {"@length": 1e-06, "@source": "node128", "@target": "node130"}}, "node131": {"edge130": {"@length": 0.001509, "@source": "node131", "@target": "node132"}, "edge131": {"@length": 1e-06, "@source": "node131", "@target": "node133", "^ot:bootstrapValues": 0.29}}, "node133": {"edge132": {"@length": 0.005643, "@source": "node133", "@target": "node134"}, "edge133": {"@length": 1e-06, "@source": "node133", "@target": "node135"}}, "node137": {"edge136": {"@length": 0.067047, "@source": "node137", "@target": "node138", "^ot:bootstrapValues": 1}, "edge167": {"@length": 0.097246, "@source": "node137", "@target": "node169"}}, "node138": {"edge137": {"@length": 0.035313, "@source": "node138", "@target": "node139"}, "edge138": {"@length": 0.007619, "@source": "node138", "@target": "node140", "^ot:bootstrapValues": 0.88}}, "node140": {"edge139": {"@length": 0.030364, "@source": "node140", "@target": "node141", "^ot:bootstrapValues": 1}, "edge144": {"@length": 0.038559, "@source": "node140", "@target": "node146", "^ot:bootstrapValues": 1}}, "node141": {"edge140": {"@length": 0.049842, "@source": "node141", "@target": "node142"}, "edge141": {"@length": 0.0188, "@source": "node141", "@target": "node143", "^ot:bootstrapValues": 1}}, "node143": {"edge142": {"@length": 0.050306, "@source": "node143", "@target": "node144"}, "edge143": {"@length": 0.068032, "@source": "node143", "@target": "node145"}}, "node146": {"edge145": {"@length": 0.116949, "@source": "node146", "@target": "node147"}, "edge146": {"@length": 0.005481, "@source": "node146", "@target": "node148", "^ot:bootstrapValues": 0.4}}, "node148": {"edge147": {"@length": 0.061213, "@source": "node148", "@target": "node149"}, "edge148": {"@length": 0.008372, "@source": "node148", "@target": "node150", "^ot:bootstrapValues": 0.57}}, "node150": {"edge149": {"@length": 0.003339, "@source": "node150", "@target": "node151", "^ot:bootstrapValues": 0.42}, "edge162": {"@length": 0.006234, "@source": "node150", "@target": "node164", "^ot:bootstrapValues": 0.54}}, "node151": {"edge150": {"@length": 0.003041, "@source": "node151", "@target": "node152", "^ot:bootstrapValues": 0.29}, "edge161": {"@length": 0.034902, "@source": "node151", "@target": "node163"}}, "node152": {"edge151": {"@length": 0.015387, "@source": "node152", "@target": "node153", "^ot:bootstrapValues": 0.65}, "edge154": {"@length": 0.001324, "@source": "node152", "@target": "node156", "^ot:bootstrapValues": 0.28}}, "node153": {"edge152": {"@length": 0.04672, "@source": "node153", "@target": "node154"}, "edge153": {"@length": 0.07296, "@source": "node153", "@target": "node155"}}, "node156": {"edge155": {"@length": 0.013205, "@source": "node156", "@target": "node157", "^ot:bootstrapValues": 0.96}, "edge158": {"@length": 0.032797, "@source": "node156", "@target": "node160", "^ot:bootstrapValues": 1}}, "node157": {"edge156": {"@length": 0.023605, "@source": "node157", "@target": "node158"}, "edge157": {"@length": 0.020671, "@source": "node157", "@target": "node159"}}, "node160": {"edge159": {"@length": 0.013601, "@source": "node160", "@target": "node161"}, "edge160": {"@length": 0.009902, "@source": "node160", "@target": "node162"}}, "node164": {"edge163": {"@length": 0.029454, "@source": "node164", "@target": "node165"}, "edge164": {"@length": 0.023497, "@source": "node164", "@target": "node166", "^ot:bootstrapValues": 1}}, "node166": {"edge165": {"@length": 0.007945, "@source": "node166", "@target": "node167"}, "edge166": {"@length": 0.011014, "@source": "node166", "@target": "node168"}}, "node170": {"edge169": {"@length": 0.102513, "@source": "node170", "@target": "node171", "^ot:bootstrapValues": 1}, "edge174": {"@length": 0.118492, "@source": "node170", "@target": "node176", "^ot:bootstrapValues": 1}}, "node171": {"edge170": {"@length": 0.002887, "@source": "node171", "@target": "node172"}, "edge171": {"@length": 0.001281, "@source": "node171", "@target": "node173", "^ot:bootstrapValues": 0.35}}, "node173": {"edge172": {"@length": 0.002545, "@source": "node173", "@target": "node174"}, "edge173": {"@length": 0.021074, "@source": "node173", "@target": "node175"}}, "node176": {"edge175": {"@length": 0.014909, "@source": "node176", "@target": "node177"}, "edge176": {"@length": 0.007839, "@source": "node176", "@target": "node178"}}, "node179": {"edge178": {"@length": 0.231277, "@source": "node179", "@target": "node180"}, "edge179": {"@length": 0.069291, "@source": "node179", "@target": "node181", "^ot:bootstrapValues": 1}}, "node181": {"edge180": {"@length": 0.009286, "@source": "node181", "@target": "node182", "^ot:bootstrapValues": 0.67}, "edge193": {"@length": 0.085509, "@source": "node181", "@target": "node195"}}, "node182": {"edge181": {"@length": 0.048884, "@source": "node182", "@target": "node183", "^ot:bootstrapValues": 1}, "edge186": {"@length": 0.050001, "@source": "node182", "@target": "node188", "^ot:bootstrapValues": 1}}, "node183": {"edge182": {"@length": 0.042134, "@source": "node183", "@target": "node184", "^ot:bootstrapValues": 1}, "edge185": {"@length": 0.036854, "@source": "node183", "@target": "node187"}}, "node184": {"edge183": {"@length": 0.046438, "@source": "node184", "@target": "node185"}, "edge184": {"@length": 0.025473, "@source": "node184", "@target": "node186"}}, "node188": {"edge187": {"@length": 0.043441, "@source": "node188", "@target": "node189"}, "edge188": {"@length": 0.018099, "@source": "node188", "@target": "node190", "^ot:bootstrapValues": 0.92}}, "node190": {"edge189": {"@length": 0.014841, "@source": "node190", "@target": "node191", "^ot:bootstrapValues": 0.96}, "edge192": {"@length": 0.035071, "@source": "node190", "@target": "node194"}}, "node191": {"edge190": {"@length": 0.073959, "@source": "node191", "@target": "node192"}, "edge191": {"@length": 0.029476, "@source": "node191", "@target": "node193"}}, "node96": {"edge194": {"@length": 0.07321, "@source": "node96", "@target": "node196"}, "edge95": {"@length": 0.07321, "@source": "node96", "@target": "node97", "^ot:bootstrapValues": 1}}, "node97": {"edge96": {"@length": 0.127942, "@source": "node97", "@target": "node98"}, "edge97": {"@length": 0.05712, "@source": "node97", "@target": "node99", "^ot:bootstrapValues": 1}}, "node99": {"edge103": {"@length": 0.018508, "@source": "node99", "@target": "node105", "^ot:bootstrapValues": 0.85}, "edge98": {"@length": 0.021968, "@source": "node99", "@target": "node100", "^ot:bootstrapValues": 0.91}}}, "nodeById": {"node100": {}, "node101": {"@otu": "otu3"}, "node102": {}, "node103": {"@otu": "otu51"}, "node104": {"@otu": "otu5"}, "node105": {}, "node106": {}, "node107": {"@otu": "otu53"}, "node108": {}, "node109": {}, "node110": {}, "node111": {"@otu": "otu54"}, "node112": {"@otu": "otu55"}, "node113": {}, "node114": {"@otu": "otu56"}, "node115": {}, "node116": {}, "node117": {}, "node118": {"@otu": "otu57"}, "node119": {}, "node120": {"@otu": "otu58"}, "node121": {"@otu": "otu59"}, "node122": {}, "node123": {}, "node124": {}, "node125": {"@otu": "otu60"}, "node126": {}, "node127": {"@otu": "otu61"}, "node128": {}, "node129": {"@otu": "otu62"}, "node130": {"@otu": "otu63"}, "node131": {}, "node132": {"@otu": "otu9"}, "node133": {}, "node134": {"@otu": "otu65"}, "node135": {"@otu": "otu66"}, "node136": {"@otu": "otu67"}, "node137": {}, "node138": {}, "node139": {"@otu": "otu68"}, "node140": {}, "node141": {}, "node142": {"@otu": "otu69"}, "node143": {}, "node144": {"@otu": "otu70"}, "node145": {"@otu": "otu71"}, "node146": {}, "node147": {"@otu": "otu72"}, "node148": {}, "node149": {"@otu": "otu73"}, "node150": {}, "node151": {}, "node152": {}, "node153": {}, "node154": {"@otu": "otu74"}, "node155": {"@otu": "otu75"}, "node156": {}, "node157": {}, "node158": {"@otu": "otu76"}, "node159": {"@otu": "otu77"}, "node160": {}, "node161": {"@otu": "otu78"}, "node162": {"@otu": "otu79"}, "node163": {"@otu": "otu80"}, "node164": {}, "node165": {"@otu": "otu81"}, "node166": {}, "node167": {"@otu": "otu82"}, "node168": {"@otu": "otu83"}, "node169": {"@otu": "otu84"}, "node170": {}, "node171": {}, "node172": {"@otu": "otu85"}, "node173": {}, "node174": {"@otu": "otu86"}, "node175": {"@otu": "otu87"}, "node176": {}, "node177": {"@otu": "otu88"}, "node178": {"@otu": "otu89"}, "node179": {}, "node180": {"@otu": "otu90"}, "node181": {}, "node182": {}, "node183": {}, "node184": {}, "node185": {"@otu": "otu16"}, "node186": {"@otu": "otu17"}, "node187": {"@otu": "otu15"}, "node188": {}, "node189": {"@otu": "otu14"}, "node190": {}, "node191": {}, "node192": {"@otu": "otu95"}, "node193": {"@otu": "otu13"}, "node194": {"@otu": "otu97"}, "node195": {"@otu": "otu12"}, "node196": {"@otu": "otu1"}, "node96": {"@label": "1.0", "@root": true}, "node97": {}, "node98": {"@otu": "otu2"}, "node99": {}}}}}}}}, "branch2sha": {"master": "c33806c9ee11db205ee8c02a42e31b1c3128e299"}, "commentHTML": "", "duplicateStudyIDs": [], "shardName": "phylesystem-1", "versionHistory": [{"id": "d20c5c6494a7c8664add10cb024e6cbf7d9c2ac9", "author_name": "ostratodd", "author_email": "ANONYMOUS", "date": "Sat, 6 May 2017 20:39:23 +0000", "date_ISO_8601": "2017-05-06 20:39:23 +0000", "relative_date": "9 years ago", "message_subject": "add focal clade name", "message_body": "(Update document 'ot_1047' via OpenTree API)"}, {"id": "9efed1cddca0feb3e47f703ade84000ebdfec385", "author_name": "ostratodd", "author_email": "ANONYMOUS", "date": "Sat, 6 May 2017 14:51:39 +0000", "date_ISO_8601": "2017-05-06 14:51:39 +0000", "relative_date": "9 years ago", "message_subject": "added link to data dryad repository. Added Fig 3.", "message_body": "(Update document 'ot_1047' via OpenTree API)"}, {"id": "e5f0a87f239cd0461aa9b0d998e397fbe90d34fb", "author_name": "ostratodd", "author_email": "ANONYMOUS", "date": "Sat, 6 May 2017 14:20:08 +0000", "date_ISO_8601": "2017-05-06 14:20:08 +0000", "relative_date": "9 years ago", "message_subject": "added link to data dryad repository", "message_body": "(Update document 'ot_1047' via OpenTree API)"}, {"id": "2ac9d9bfff7c61bebbc1c1c9757f6738c2fb8207", "author_name": "jbernot", "author_email": "ANONYMOUS", "date": "Fri, 24 Feb 2017 23:34:39 +0000", "date_ISO_8601": "2017-02-24 23:34:39 +0000", "relative_date": "9 years ago", "message_subject": "mapped OTUs", "message_body": "(Update document 'ot_1047' via OpenTree API)"}, {"id": "4107826624c0a4670a1e903b29d152758c60d220", "author_name": "jbernot", "author_email": "ANONYMOUS", "date": "Fri, 24 Feb 2017 22:38:17 +0000", "date_ISO_8601": "2017-02-24 22:38:17 +0000", "relative_date": "9 years ago", "message_subject": "Update document 'ot_1047' via OpenTree API"}]}