pythonVersion 2.7.9 pythonImplementation CPython All life false Source data for tree(s) 'tree1' tree1 otu102 otu120 otu149 otu170 otu177 otu179 otu184 otu198 otu2 otu272 otu284 otu45 otu53 otu73 otu74 otu75 otu76 otu77 otu78 otu79 otu80 otu81 otu82 ^ot:comment ^ot:branchLengthTimeUnit ^ot:nodeLabelMode ^ot:nodeLabelTimeUnit ^ot:reasonsToExcludeFromSynthesis ^ot:ottId Matt Girard 929128 Colubroidea ot_1665 Hussam Zaher, Mario H. Yánez-Muñoz, Miguel T. Rodrigues, Roberta Graboski, Fabio A. Machado, Marco Altamirano-Benavides, Sandro L. Bonatto, Felipe G. Grazziotin, 2018, 'Origin and hidden diversity within the poorly known Galápagos snake radiation (Serpentes: Dipsadidae)', Systematics and Biodiversity, pp. 1-29 2018 Erythrolamprus pygmaeus 579148 Erythrolamprus pygmaeus Erythrolamprus reginae 110487 Erythrolamprus reginae Oxyrhopus formosus 468324 Oxyrhopus formosus Oxyrhopus clathratus 510715 Oxyrhopus clathratus Siphlophis ayauma Siphlophis cervinus 161568 Siphlophis cervinus Siphlophis compressus 169260 Siphlophis compressus Siphlophis pulcher 380566 Siphlophis pulcher Siphlophis longicaudatus 425323 Siphlophis longicaudatus Hydrodynastes bicinctus 632197 Hydrodynastes bicinctus Hydrodynastes gigas 1087428 Hydrodynastes gigas Thamnodynastes rutilus 855997 Thamnodynastes rutilus Erythrolamprus miliaris 931747 Erythrolamprus miliaris Thamnodynastes strigatus 579155 Thamnodynastes strigatus Thamnodynastes lanei 855995 Thamnodynastes lanei Thamnodynastes hypoconia 425331 Thamnodynastes hypoconia Thamnodynastes pallidus 736369 Thamnodynastes pallidus Tomodon dorsatus 856002 Tomodon dorsatus Gomesophis brasiliensis 1087425 Gomesophis brasiliensis Ptychophis flavovirgatus 380564 Ptychophis flavovirgatus Calamodontophis paucidens 260455 Calamodontophis paucidens Pseudotomodon trigonatus 905643 Pseudotomodon trigonatus Tachymenis peruviana 855999 Tachymenis peruviana Erythrolamprus poecilogyrus 590985 Erythrolamprus poecilogyrus Helicops nentur Helicops carinicaudus 1052138 Helicops carinicaudus Helicops gomesi 1087426 Helicops gomesi Helicops angulatus 632193 Helicops angulatus Helicops infrataeniatus 1087427 Helicops infrataeniatus Helicops pictiventris 740051 Helicops pictiventris Helicops hagmanni 1052136 Helicops hagmanni Pseudoeryx plicatilis 161576 Pseudoeryx plicatilis Hydrops triangularis 632195 Hydrops triangularis Philodryas psammophidea 579153 Philodryas psammophidea Erythrolamprus ceii 1052134 Erythrolamprus ceii Philodryas agassizii 905640 Philodryas agassizii Philodryas patagoniensis 823116 Philodryas patagoniensis Philodryas aestiva 823184 Philodryas aestiva Philodryas georgeboulengeri 959815 Philodryas georgeboulengeri Philodryas argentea 212733 Philodryas argenteus Philodryas viridissima 823145 Philodryas viridissima Philodryas olfersii 468233 Philodryas olfersii Philodryas trilineata 1022262 Philodryas trilineata Philodryas baroni 232661 Philodryas baroni Philodryas mattogrossensis 905635 Philodryas mattogrossensis Erythrolamprus almadensis 1052130 Erythrolamprus almadensis Philodryas nattereri 287758 Philodryas nattereri Tropidodryas serra 823120 Tropidodryas serra Tropidodryas striaticeps 755674 Tropidodryas striaticeps Apostolepis dimidiata 835013 Apostolepis dimidiata Apostolepis albicollaris 546849 Apostolepis albicollaris Apostolepis flavotorquata 1091220 Apostolepis flavotorquata Apostolepis rondoni 546855 Apostolepis rondoni Apostolepis cearensis 546857 Apostolepis cearensis Apostolepis assimilis 835012 Apostolepis assimilis Elapomorphus quinquelineatusB Erythrolamprus jaegeri 1087430 Erythrolamprus jaegeri Phalotris mertensi 525955 Phalotris mertensi Phalotris lativittatus 525967 Phalotris lativittatus Phalotris nasutus 510712 Phalotris nasutus Phalotris lemniscatus 510713 Phalotris lemniscatus Phalotris reticulatus 681857 Phalotris bilineatus reticulatus Taeniophallus nicagus 425328 Taeniophallus nicagus Taeniophallus brevirostris 758091 Taeniophallus brevirostris Taeniophallus affinis 855998 Taeniophallus affinis Echinanthera melanostigma 58198 Echinanthera melanostigma Echinanthera undulata 754308 Echinanthera undulata Erythrolamprus atraventer 1052128 Erythrolamprus atraventer Sordellina punctata 1035358 Sordellina punctata Xenopholis scalaris 959814 Xenopholis scalaris Xenopholis undulatus 791578 Xenopholis undulatus Caaeteboia amarali 178125 Caaeteboia amarali Saphenophis antioquiensis 4122120 Saphenophis antioquiensis Crisantophis nevermanni 58201 Crisantophis nevermanni Conophis lineatus 260460 Conophis lineatus Manolepis putnami 736088 Manolepis putnami Atractus gigas 4120871 Atractus gigas Atractus typhon 5925962 Atractus typhon Xenodon pulcher 681867 Xenodon pulcher Atractus savagei Atractus paucidens 4120846 Atractus paucidens Atractus modestus 4120799 Atractus modestus Atractus zidocki 59101 Atractus zidoki Atractus microrhynchus 4120821 Atractus microrhynchus Atractus occidentalis 4120883 Atractus occidentalis Atractus dunni 4120849 Atractus dunni Atractus esepe Atractus iridescens 4120863 Atractus iridescens Atractus cerberus Xenodon matogrossensis 681871 Xenodon matogrossensis Atractus reticulatus 598507 Atractus reticulatus Atractus multicinctus 4120852 Atractus multicinctus Atractus badius 580094 Atractus badius Atractus flammigerus 580085 Atractus flammigerus Atractus tartarus Atractus zebrinus 598511 Atractus zebrinus Atractus trihedrurus 260452 Atractus trihedrurus Atractus albuquerquei 260451 Atractus albuquerquei Atractus duboisi 5925960 Atractus duboisi Atractus resplendens 4120840 Atractus resplendens Xenodon semicinctus 736091 Xenodon semicinctus Atractus schach 580086 Atractus schach Atractus touzeti 6157407 Atractus touzeti Atractus major 4120891 Atractus major Atractus elaps 811174 Atractus elaps Atractus lasallei 4120813 Atractus lasallei Atractus wagleri 469299 Atractus wagleri Atractus lehmanni 4120797 Atractus lehmanni Atractus roulei 4120845 Atractus roulei Atractus pyroni Atractus carrioni 4120867 Atractus carrioni Erythrolamprus melanotus Xenodon histricus 392995 Xenodon histricus Geophis godmani 1052132 Geophis godmani Geophis juarezi 4121833 Geophis juarezi Geophis carinosus 736086 Geophis carinosus Geophis dubius 4121820 Geophis dubius Geophis turbidus 5223286 Geophis turbidus Geophis latifrontalis 4121798 Geophis latifrontalis Geophis occabus 5223287 Geophis occabus Dipsas neivai 260459 Dipsas neivai Dipsas variegata 59105 Dipsas variegata Sibynomorphus vagus 4121759 Sibynomorphus vagus Xenodon nattereri 681864 Xenodon nattereri Dipsas pavonina 4120972 Dipsas pavonina Dipsas peruana 4120961 Dipsas peruana Sibynomorphus turgidus 702349 Sibynomorphus turgidus Sibynomorphus mikanii 380563 Sibynomorphus mikanii Dipsas catesbyi 132781 Dipsas catesbyi Sibynomorphus neuwiedi 1002105 Sibynomorphus neuwiedi Sibynomorphus garmani 380562 Sibynomorphus garmani Sibynomorphus ventrimaculatus 1002113 Sibynomorphus ventrimaculatus Dipsas pratti 469301 Dipsas pratti Dipsas albifrons 754310 Dipsas albifrons Xenodon guentheri 943661 Xenodon guentheri Dipsas indica 59102 Dipsas indica Dipsas articulata 368158 Dipsas articulata Ninia atrata 510716 Ninia atrata Sibon noalamina 5852381 Sibon noalamina Sibon dimidiatus 4120768 Sibon dimidiatus Sibon nebulatus 106874 Sibon nebulatus Sibon annulatus 4120767 Sibon annulatus Tropidodipsas sartorii 4121990 Tropidodipsas sartorii Tropidodipsas fischeri 4120780 Tropidodipsas fischeri Cryophis hallbergi 811178 Cryophis hallbergi Xenodon dorbignyi 510718 Xenodon dorbignyi Hydromorphus concolor 736084 Hydromorphus concolor Tretanorhinus nigroluteus 212487 Tretanorhinus nigroluteus Adelphicos quadrivirgatus 1091206 Adelphicos quadrivirgatum Hypsiglena torquata 740048 Hypsiglena torquata Hypsiglena affinis 708941 Hypsiglena affinis Hypsiglena ochrorhyncha 134662 Hypsiglena ochrorhyncha Hypsiglena unaocularus 5558563 Hypsiglena unaocularus Hypsiglena chlorophaea 708943 Hypsiglena chlorophaea Hypsiglena slevini 134649 Hypsiglena slevini Hypsiglena jani 708950 Hypsiglena jani Xenodon neuwiedii 418328 Xenodon neuwiedii Pseudoleptodeira latifasciata 760018 Pseudoleptodeira latifasciata Hypsiglena tanzeri 708940 Hypsiglena tanzeri Leptodeira rubricata 469297 Leptodeira rubricata Leptodeira maculata 469295 Leptodeira maculata Leptodeira septentrionalis 236553 Leptodeira septentrionalis Leptodeira bakeri 469293 Leptodeira bakeri Leptodeira annulata 110477 Leptodeira annulata Leptodeira splendida 160189 Leptodeira splendida Leptodeira punctata 236552 Leptodeira punctata Leptodeira frenata 312308 Leptodeira frenata Xenodon merremii 465899 Xenodon merremi Leptodeira uribei 900859 Leptodeira uribei Imantodes gemmistratus 236545 Imantodes gemmistratus Imantodes cenchoa 110480 Imantodes cenchoa Imantodes chocoensis 50147 Imantodes chocoensis Imantodes lentiferus 110479 Imantodes lentiferus Imantodes inornatus 236546 Imantodes inornatus Nothopsis rugosus 579159 Nothopsis rugosus Tretanorhinus variabilis 736367 Tretanorhinus variabilis Pliocercus euryzonus 4121605 Pliocercus euryzonus Coniophanes fissidens 811180 Coniophanes fissidens Xenodon werneri 736362 Xenodon werneri Trimetopon gracile 579151 Trimetopon gracile Rhadinaea flavilata 761430 Rhadinaea flavilata Rhadinaea fulvivittis 760015 Rhadinaea fulvivittis Amastridium veliferum 995843 Amastridium veliferum Tantalophis discolor 438286 Tantalophis discolor Synophis bogerti 5925965 Synophis bogerti Synophis zamora 5925968 Synophis zamora Synophis insulomontanus 5925966 Synophis insulomontanus Synophis lasallei 4122075 Synophis lasallei Synophis niceforomariae 6157438 Synophis niceforomariae Xenodon severus 608781 Xenodon severus Synophis bicolor 4122077 Synophis bicolor Diaphorolepis wagneri 4122124 Diaphorolepis wagneri Synophis zaheri Synophis calamitus 4122074 Synophis calamitus Farancia erytrogramma 817015 Farancia erytrogramma Farancia abacura 931412 Farancia abacura Carphophis amoenus 642555 Carphophis amoenus Carphophis vermis 4120896 Carphophis vermis Diadophis punctatus 324337 Diadophis punctatus Heterodon simus 495351 Heterodon simus Lygophis flavifrenatus 4565 Lygophis flavifrenatus Heterodon nasicus 632191 Heterodon nasicus Heterodon platirhinos 405958 Heterodon platirhinos Contia longicaudae 27578 Contia longicaudae Contia tenuis 324332 Contia tenuis Sticophanes ningshaanensis Thermophis zhaoermii 582937 Thermophis zhaoermii Thermophis shangrila 5558580 Thermophis shangrila Thermophis baileyi 762356 Thermophis baileyi Pseudoxenodon macrops 779756 Pseudoxenodon macrops Pseudoxenodon karlschmidti 120966 Pseudoxenodon karlschmidti Lygophis meridionalis 510720 Lygophis meridionalis Pseudoxenodon bambusicola 269309 Pseudoxenodon bambusicola Lampropeltis getula 547409 Lampropeltis getula Spalerosophis diadema 1053208 Spalerosophis diadema Coluber constrictor 405963 Coluber constrictor Hapsidophrys smaragdina 680935 Hapsidophrys smaragdina Ahaetulla prasina 4121393 Ahaetulla prasina Calamaria yunnanensis 1020064 Calamaria yunnanensis Calamaria pavimentata 172208 Calamaria pavimentata Scaphiodontophis annulatus 959125 Scaphiodontophis annulatus Sibynophis collaris 1080957 Sibynophis collaris Erythrolamprus epinephelus 58205 Erythrolamprus epinephelus Lygophis paucidens 525962 Lygophis paucidens Grayia ornata 1055748 Grayia ornata Amphiesma stolatum 642558 Amphiesma stolatum Rhabdophis subminiatus 195306 Rhabdophis subminiatus Afronatrix anoscopus 1074252 Afronatrix anoscopus Natrix natrix 1010557 Natrix natrix Thamnophis sirtalis 107027 Thamnophis sirtalis Hydrophis curtus 217068 Hydrophis curtus Laticauda colubrina 109046 Laticauda colubrina Bungarus fasciatus 578893 Bungarus fasciatus Naja atra 477238 Naja atra Lygophis anomalus 580372 Lygophis anomalus Micrurus surinamensis 309738 Micrurus surinamensis Calliophis maculiceps 4120486 Calliophis maculiceps Psammodynastes pulverulentus 590135 Psammodynastes pulverulentus Leioheterodon madagascariensis 120286 Leioheterodon madagascariensis Duberria lutrix 69224 Duberria lutrix Gonionotophis capensis 576226 Gonionotophis capensis Boaedon fuliginosus 880707 Boaedon fuliginosus Psammophylax variabilis 576228 Psammophylax variabilis Rhamphiophis oxyrhynchus 778819 Rhamphiophis oxyrhynchus Amblyodipsas polylepis 1044807 Amblyodipsas polylepis Lygophis elegantissimus 1087429 Lygophis elegantissimus Aparallactus capensis 167106 Aparallactus capensis Atractaspis micropholis 796236 Atractaspis micropholis Homoroselaps lacteus 294910 Homoroselaps lacteus Homalopsis buccata 49551 Homalopsis buccata Cerberus rynchops 769296 Cerberus rynchops Enhydris bocourti 570252 Enhydris bocourti Bothriechis schlegelii 1024804 Bothriechis schlegelii Bothrops atrox 27086 Bothrops atrox Agkistrodon piscivorus 652539 Agkistrodon piscivorus Sistrurus catenatus 755882 Sistrurus catenatus Lygophis lineatus 652759 Lygophis lineatus Crotalus durissus 600090 Crotalus durissus Bitis gabonica 785606 Bitis gabonica Causus lichtensteinii 4120656 Causus lichtensteinii Macrovipera lebetina 78579 Macrovipera lebetina Azemiops feae 705289 Azemiops feae Pareas carinatus 680926 Pareas carinatus Pareas hamptoni 215728 Pareas hamptoni Aplopeltura boa 216313 Aplopeltura boa Achalinus rufescens 195301 Achalinus rufescens Stoliczkia borneensis 106872 Stoliczkia borneensis Uromacer frenatus 736366 Uromacer frenatus Xenodermus javanicus 195297 Xenodermus javanicus Acrochordus javanicus 1061998 Acrochordus javanicus Acrochordus granulatus 511702 Acrochordus granulatus Eryx conicus 546135 Eryx conicus Boa constrictor 764377 Boa constrictor Uromacer oxyrhynchus 579180 Uromacer oxyrhynchus Uromacer catesbyi 736365 Uromacer catesbyi Cubophis ruttyi 6473 Cubophis ruttyi Cubophis fuscicauda 6479 Cubophis fuscicauda Cubophis caymanus 6478 Cubophis caymanus Erythrolamprus juliae 110489 Erythrolamprus juliae Cubophis cantherigerus 714996 Cubophis cantherigerus Cubophis vudii 754329 Cubophis vudii Haitiophis anomalus 217787 Haitiophis anomalus Caraiba andreae 4126069 Caraiba andreae Borikenophis portoricensis 932792 Borikenophis portoricensis Borikenophis prymnus Borikenophis variegatus 971054 Borikenophis variegatus Ialtris dorsalis 110483 Ialtris dorsalis Hypsirhynchus scalaris 632200 Hypsirhynchus scalaris Hypsirhynchus ferox 632199 Hypsirhynchus ferox Erythrolamprus cursor 4121911 Erythrolamprus cursor Hypsirhynchus parvifrons 7383 Hypsirhynchus parvifrons Schwartzophis funereum 7378 Hypsirhynchus funereus Schwartzophis polylepis 580095 Hypsirhynchus polylepis Schwartzophis callilaemus Darlingtonia haetiana 169264 Ialtris haetianus Alsophis antillensis 987681 Alsophis antillensis Alsophis manselli 508322 Alsophis manselli Alsophis sibonius 527808 Alsophis sibonius Alsophis sajdaki 527810 Alsophis sajdaki Alsophis rufiventris 579174 Alsophis rufiventris Erythrolamprus breviceps 110476 Erythrolamprus breviceps Alsophis rijgersmaei 579175 Alsophis rijgersmaei Magliophis stahli 767446 Magliophis stahli Magliophis exiguum 7387 Magliophis exiguum Arrhyton dolichura 7388 Arrhyton dolichura Arrhyton tanyplectum 580091 Arrhyton tanyplectum Arrhyton procerum 580099 Arrhyton procerum Arrhyton landoi 7377 Arrhyton redimitum Arrhyton vittatum 580092 Arrhyton vittatum Arrhyton supernum 580100 Arrhyton supernum Arrhyton taeniatum 580101 Arrhyton taeniatum Erythrolamprus mimus 58207 Erythrolamprus mimus Psomophis joberti 380558 Psomophis joberti Psomophis genimaculatus 380561 Psomophis genimaculatus Psomophis obtusus 374827 Psomophis obtusus Pseudalsophis steindachneri Santiago CTMZ4725 Pseudalsophis slevini Pinzon CTMZ4730 Pseudalsophis slevini Isabela CTMZ4721 Pseudalsophis steindachneri Santa Cruz CTMZ4740 Pseudalsophis biserialis San Cristobal CTMZ4659 Pseudalsophis dorsalis Santa Fe CTMZ4647 Pseudalsophis occidentalis Tortuga CTMZ4665 Erythrolamprus aesculapii 59108 Erythrolamprus aesculapii Pseudalsophis dorsalis Rabida CTMZ4727 Pseudalsophis hoodensis Espanola CTMZ4657 Pseudalsophis elegans CTMZ7428 Pseudoboa coronata 684602 Pseudoboa coronata Pseudoboa nigra 680927 Pseudoboa nigra Pseudoboa neuwiedii 161573 Pseudoboa neuwiedii Rhachidelus brazili 374842 Rhachidelus brazili Clelia clelia 59103 Clelia clelia Boiruna maculata 260453 Boiruna maculata Phimophis guerini 905638 Phimophis guerini Erythrolamprus typhlus 809240 Erythrolamprus typhlus Paraphimophis rusticus 571743 Paraphimophis rustica Mussurana bicolor 260458 Mussurana bicolor Drepanoides anomalus 59107 Drepanoides anomalus Oxyrhopus fitzingeri 4121793 Oxyrhopus fitzingeri Rodriguesophis iglesiasi 736078 Rodriguesophis iglesiasi Oxyrhopus trigeminus 525964 Oxyrhopus trigeminus Oxyrhopus guibei 823094 Oxyrhopus guibei Oxyrhopus rhombifer 941204 Oxyrhopus rhombifer Oxyrhopus melanogenys 809253 Oxyrhopus melanogenys Oxyrhopus petola 995845 Oxyrhopus petolarius ot:substitutionCount Maximum likelihood node2 node685 false true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true