{"sha": "c33806c9ee11db205ee8c02a42e31b1c3128e299", "data": {"nexml": {"@about": "#study", "@generator": "Open Tree API", "@id": "study", "@nexml2json": "1.2.1", "@nexmljson": "http://purl.org/opentree/nexson", "@version": "0.9", "@xmlns": {"$": "http://www.nexml.org/2009", "nex": "http://www.nexml.org/2009", "ot": "http://purl.org/opentree-terms#", "xhtml": "http://www.w3.org/1999/xhtml/vocab#", "xsd": "http://www.w3.org/2001/XMLSchema#", "xsi": "http://www.w3.org/2001/XMLSchema-instance"}, "^ot:agents": {"agent": [{"@description": "Open Tree NexSON validation", "@id": "peyotl-validator", "@name": "api.opentreeoflife.org/validate", "@url": "https://github.com/OpenTreeOfLife/peyotl", "@version": "0.0.4a", "invocation": {"commandLine": [], "otherProperty": [{"name": "pythonVersion", "value": "2.7.16"}, {"name": "pythonImplementation", "value": "CPython"}]}}, {"@description": "Web-based interface for submitting, editing, and reviewing studies in the Open Tree of Life project.", "@id": "opentree-curation-webapp", "@name": "OpenTree curation webapp", "@url": "https://github.com/OpenTreeOfLife/opentree", "@version": "0.0.0"}]}, "^ot:annotationEvents": {"annotation": [{"@dateCreated": "2022-05-05T15:03:32.688Z", "@description": "Aids for mapping study OTUs to OTT taxa", "@id": "otu-mapping-hints", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "OTU_MAPPING_HINTS", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"autoAcceptExactMatches": false, "searchContext": {"$": "All life"}, "substitutions": {"substitution": [{"@active": false, "@valid": true, "new": {"$": ""}, "old": {"$": ""}}]}, "useFuzzyMatching": true}, "refersTo": {"@top": {"$": "meta"}}}]}, {"@dateCreated": "2022-05-05T15:03:32.688Z", "@description": "Describes external namesets merged into this study", "@id": "merged-namesets-metadata", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "MERGED_NAMESET_INFO", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"namesets": {"nameset": []}}, "refersTo": {"@top": {"$": "meta"}}}]}, {"@dateCreated": "2022-05-05T15:03:32.688Z", "@description": "Describes supporting data files for this study", "@id": "supporting-files-metadata", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "SUPPORTING_FILE_INFO", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"@movedToPermanentArchive": false, "files": {"file": [{"@filename": "Figure Falconidae Phylogeny.txt", "@size": 2475, "@type": "nexus", "@url": "/curator/download/supporting_files.doc.bed542a765d4506a.4669677572652046616c636f6e69646165205068796c6f67656e792e747874.txt", "description": {"$": "Source data for tree(s) 'tree1'"}, "sourceForTree": [{"$": "tree1"}]}, {"@filename": "modifiedTips.tre", "@size": 2957, "@type": "newick", "@url": "/curator/download/supporting_files.doc.9cfad99b6a938e18.6d6f646966696564546970732e747265.tre", "description": {"$": "Source data for tree(s) 'tree1'"}, "sourceForTree": [{"$": "tree1"}]}]}}, "refersTo": {"@top": {"$": "meta"}}}]}, {"@id": "peyotl-validator-event", "@description": "Open Tree NexSON validation", "@wasAssociatedWithAgentId": "peyotl-validator", "@passedChecks": true, "@preserve": false, "message": [{"@code": "MULTIPLE_TIPS_MAPPED_TO_OTT_ID", "data": ["otu115", "otu116"], "refersTo": {"@top": "otus", "@idref": "otus1", "@otusID": "otus1"}, "@severity": "WARNING"}, {"@code": "MULTIPLE_TIPS_MAPPED_TO_OTT_ID", "data": ["otu69", "otu70"], "refersTo": {"@top": "otus", "@idref": "otus1", "@otusID": "otus1"}, "@severity": "WARNING"}, {"@code": "MULTIPLE_TIPS_MAPPED_TO_OTT_ID", "data": ["otu85", "otu86"], "refersTo": {"@top": "otus", "@idref": "otus1", "@otusID": "otus1"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:comment"], "refersTo": {"@top": "nexml", "@idref": "study"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["highestMintedElementIDs"], "refersTo": {"@top": "nexml", "@idref": "study"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:nodeLabelMode", "^ot:nodeLabelTimeUnit", "^ot:reasonsToExcludeFromSynthesis"], "refersTo": {"@top": "trees", "@idref": "tree1", "@treesID": "trees1", "@treeID": "tree1"}, "@severity": "WARNING"}, {"@code": "MISSING_OPTIONAL_KEY", "data": ["^ot:ottId"], "refersTo": {"@top": "otus", "@idref": ["otu10", "otu11", "otu12", "otu13", "otu14", "otu15", "otu16", "otu17", "otu18", "otu19", "otu2", "otu20", "otu21", "otu22", "otu23", "otu24", "otu25", "otu26", "otu27", "otu28", "otu29", "otu3", "otu30", "otu31", "otu32", "otu33", "otu34", "otu35", "otu36", "otu37", "otu38", "otu39", "otu4", "otu40", "otu41", "otu42", "otu43", "otu44", "otu45", "otu46", "otu47", "otu48", "otu49", "otu5", "otu50", "otu51", "otu52", "otu53", "otu54", "otu55", "otu56", "otu57", "otu58", "otu59", "otu6", "otu60", "otu61", "otu62", "otu63", "otu64", "otu65", "otu66", "otu7", "otu8", "otu9"], "@otusID": "otus1", "@otuID": ["otu10", "otu11", "otu12", "otu13", "otu14", "otu15", "otu16", "otu17", "otu18", "otu19", "otu2", "otu20", "otu21", "otu22", "otu23", "otu24", "otu25", "otu26", "otu27", "otu28", "otu29", "otu3", "otu30", "otu31", "otu32", "otu33", "otu34", "otu35", "otu36", "otu37", "otu38", "otu39", "otu4", "otu40", "otu41", "otu42", "otu43", "otu44", "otu45", "otu46", "otu47", "otu48", "otu49", "otu5", "otu50", "otu51", "otu52", "otu53", "otu54", "otu55", "otu56", "otu57", "otu58", "otu59", "otu6", "otu60", "otu61", "otu62", "otu63", "otu64", "otu65", "otu66", "otu7", "otu8", "otu9"]}, "@severity": "WARNING"}]}]}, "^ot:candidateTreeForSynthesis": [], "^ot:comment": "", "^ot:curatorName": ["eliotmiller", "James Waterford"], "^ot:dataDeposit": {"@href": ""}, "^ot:focalClade": 212186, "^ot:focalCladeOTTTaxonName": "Falconidae", "^ot:otusElementOrder": ["otus1"], "^ot:studyId": "ot_2090", "^ot:studyPublication": {"@href": "http://dx.doi.org/10.1016/j.ympev.2014.08.010"}, "^ot:studyPublicationReference": "Fuchs, J., Johnson, J. A., & Mindell, D. P. (2015). Rapid diversification of falcons (Aves: Falconidae) due to expansion of open habitats in the Late Miocene. Molecular Phylogenetics and Evolution, 82, 166\u2013182. https://doi.org/10.1016/j.ympev.2014.08.010\n", "^ot:studyYear": 2015, "^ot:tag": [], "^ot:treesElementOrder": ["trees1"], "highestMintedElementIDs": {"agent": 0, "annotation": 0, "edge": 130, "message": 0, "node": 131, "otu": 132, "otus": 1, "tree": 1, "trees": 1}, "otusById": {"otus1": {"otuById": {"otu1": {"^ot:originalLabel": "insignis", "^ot:ottId": 3596147, "^ot:ottTaxonName": "Polihierax insignis"}, "otu10": {"^ot:originalLabel": "rufigularis"}, "otu100": {"^ot:originalLabel": "Falco newtoni", "^ot:ottId": 624975, "^ot:ottTaxonName": "Falco newtoni"}, "otu101": {"^ot:originalLabel": "Falco araea", "^ot:ottId": 826777, "^ot:ottTaxonName": "Falco araeus"}, "otu102": {"^ot:originalLabel": "Falco punctatus", "^ot:ottId": 624974, "^ot:ottTaxonName": "Falco punctatus"}, "otu103": {"^ot:originalLabel": "Falco rupicolus", "^ot:ottId": 285806, "^ot:ottTaxonName": "Falco rupicolus"}, "otu104": {"^ot:originalLabel": "Falco moluccensis", "^ot:ottId": 3596145, "^ot:ottTaxonName": "Falco moluccensis"}, "otu105": {"^ot:originalLabel": "Falco cenchroides", "^ot:ottId": 624970, "^ot:ottTaxonName": "Falco cenchroides"}, "otu106": {"^ot:originalLabel": "Falco tinnunculus", "^ot:ottId": 534514, "^ot:ottTaxonName": "Falco tinnunculus"}, "otu107": {"^ot:originalLabel": "Falco naumanni", "^ot:ottId": 624976, "^ot:ottTaxonName": "Falco naumanni"}, "otu108": {"^ot:originalLabel": "Poliehierax semitorquatus", "^ot:ottId": 1015204, "^ot:ottTaxonName": "Polihierax semitorquatus"}, "otu109": {"^ot:originalLabel": "Microhierax caerulescens", "^ot:ottId": 301634, "^ot:ottTaxonName": "Microhierax caerulescens"}, "otu11": {"^ot:originalLabel": "deiroleucus"}, "otu110": {"^ot:originalLabel": "Microhierax melanoleucos", "^ot:ottId": 3596150, "^ot:ottTaxonName": "Microhierax melanoleucos"}, "otu111": {"^ot:originalLabel": "Microhierax fringillarius", "^ot:ottId": 3596148, "^ot:ottTaxonName": "Microhierax fringillarius"}, "otu112": {"^ot:originalLabel": "Microhierax latifrons", "^ot:ottId": 3596149, "^ot:ottTaxonName": "Microhierax latifrons"}, "otu113": {"^ot:originalLabel": "Microhierax erythrogenys", "^ot:ottId": 438653, "^ot:ottTaxonName": "Microhierax erythrogenys"}, "otu114": {"^ot:originalLabel": "Spiziapteryx circumcincta", "^ot:ottId": 1015196, "^ot:ottTaxonName": "Spiziapteryx circumcincta"}, "otu115": {"^ot:originalLabel": "Caracara cheriway", "^ot:ottId": 786444, "^ot:ottTaxonName": "Caracara plancus"}, "otu116": {"^ot:originalLabel": "Caracara plancus", "^ot:ottId": 786444, "^ot:ottTaxonName": "Caracara plancus"}, "otu117": {"^ot:originalLabel": "Ibycter americanus", "^ot:ottId": 438659, "^ot:ottTaxonName": "Ibycter americanus"}, "otu118": {"^ot:originalLabel": "Daptrius ater", "^ot:ottId": 438664, "^ot:ottTaxonName": "Daptrius ater"}, "otu119": {"^ot:originalLabel": "Milvago chimachima", "^ot:ottId": 1015193, "^ot:ottTaxonName": "Milvago chimachima"}, "otu12": {"^ot:originalLabel": "longipennis"}, "otu120": {"^ot:originalLabel": "Phalcoboenus carunculata", "^ot:ottId": 943736, "^ot:ottTaxonName": "Phalcoboenus carunculatus"}, "otu121": {"^ot:originalLabel": "Phalcoboenus albogularis", "^ot:ottId": 943734, "^ot:ottTaxonName": "Phalcoboenus albogularis"}, "otu122": {"^ot:originalLabel": "Phalcoboenus megalopterus", "^ot:ottId": 728383, "^ot:ottTaxonName": "Phalcoboenus megalopterus"}, "otu123": {"^ot:originalLabel": "Phalcoboenus australis", "^ot:ottId": 438657, "^ot:ottTaxonName": "Phalcoboenus australis"}, "otu124": {"^ot:originalLabel": "Milvago chimango", "^ot:ottId": 474152, "^ot:ottTaxonName": "Milvago chimango"}, "otu125": {"^ot:originalLabel": "Herpetotheres cachinnans", "^ot:ottId": 438655, "^ot:ottTaxonName": "Herpetotheres cachinnans"}, "otu126": {"^ot:originalLabel": "Micrastur buckleyi", "^ot:ottId": 901268, "^ot:ottTaxonName": "Micrastur buckleyi"}, "otu127": {"^ot:originalLabel": "Micrastur semitorquatus", "^ot:ottId": 1015189, "^ot:ottTaxonName": "Micrastur semitorquatus"}, "otu128": {"^ot:originalLabel": "Micrastur mirandollei", "^ot:ottId": 749743, "^ot:ottTaxonName": "Micrastur mirandollei"}, "otu129": {"^ot:originalLabel": "Micrastur ruficollis", "^ot:ottId": 273700, "^ot:ottTaxonName": "Micrastur ruficollis"}, "otu13": {"^ot:originalLabel": "cuvieri"}, "otu130": {"^ot:originalLabel": "Micrastur mintoni", "^ot:ottId": 749748, "^ot:ottTaxonName": "Micrastur mintoni"}, "otu131": {"^ot:originalLabel": "Micrastur plumbeus", "^ot:ottId": 192481, "^ot:ottTaxonName": "Micrastur plumbeus"}, "otu132": {"^ot:originalLabel": "Micrastur gilvicollis", "^ot:ottId": 1015190, "^ot:ottTaxonName": "Micrastur gilvicollis"}, "otu14": {"^ot:originalLabel": "subbuteo"}, "otu15": {"^ot:originalLabel": "concolor"}, "otu16": {"^ot:originalLabel": "eleonorae"}, "otu17": {"^ot:originalLabel": "severus"}, "otu18": {"^ot:originalLabel": "chicquera"}, "otu19": {"^ot:originalLabel": "peregrinus"}, "otu2": {"^ot:originalLabel": "sparverius"}, "otu20": {"^ot:originalLabel": "pelegrinoides"}, "otu21": {"^ot:originalLabel": "fasciinucha"}, "otu22": {"^ot:originalLabel": "biarmicus"}, "otu23": {"^ot:originalLabel": "cherrug"}, "otu24": {"^ot:originalLabel": "rusticolus"}, "otu25": {"^ot:originalLabel": "subniger"}, "otu26": {"^ot:originalLabel": "jugger"}, "otu27": {"^ot:originalLabel": "hypoleucos"}, "otu28": {"^ot:originalLabel": "mexicanus"}, "otu29": {"^ot:originalLabel": "femoralis"}, "otu3": {"^ot:originalLabel": "aesalon"}, "otu30": {"^ot:originalLabel": "novaeseelandiae"}, "otu31": {"^ot:originalLabel": "zoniventris"}, "otu32": {"^ot:originalLabel": "alopex"}, "otu33": {"^ot:originalLabel": "rupicoloides"}, "otu34": {"^ot:originalLabel": "newtoni"}, "otu35": {"^ot:originalLabel": "araea"}, "otu36": {"^ot:originalLabel": "punctatus"}, "otu37": {"^ot:originalLabel": "rupicolus"}, "otu38": {"^ot:originalLabel": "moluccensis"}, "otu39": {"^ot:originalLabel": "cenchroides"}, "otu4": {"^ot:originalLabel": "columbarius"}, "otu40": {"^ot:originalLabel": "tinnunculus"}, "otu41": {"^ot:originalLabel": "naumanni"}, "otu42": {"^ot:originalLabel": "P semitorquatus"}, "otu43": {"^ot:originalLabel": "caerulescens"}, "otu44": {"^ot:originalLabel": "melanoleucos"}, "otu45": {"^ot:originalLabel": "fringillarius"}, "otu46": {"^ot:originalLabel": "latifrons"}, "otu47": {"^ot:originalLabel": "erythrogenys"}, "otu48": {"^ot:originalLabel": "circumcincta"}, "otu49": {"^ot:originalLabel": "cheriway"}, "otu5": {"^ot:originalLabel": "dickinsoni"}, "otu50": {"^ot:originalLabel": "plancus"}, "otu51": {"^ot:originalLabel": "americanus"}, "otu52": {"^ot:originalLabel": "ater"}, "otu53": {"^ot:originalLabel": "chimachima"}, "otu54": {"^ot:originalLabel": "carunculata"}, "otu55": {"^ot:originalLabel": "albogularis"}, "otu56": {"^ot:originalLabel": "megalopterus"}, "otu57": {"^ot:originalLabel": "australis"}, "otu58": {"^ot:originalLabel": "chimango"}, "otu59": {"^ot:originalLabel": "cachinnans"}, "otu6": {"^ot:originalLabel": "ardosiaceus"}, "otu60": {"^ot:originalLabel": "buckleyi"}, "otu61": {"^ot:originalLabel": "M semitorquatus"}, "otu62": {"^ot:originalLabel": "mirandollei"}, "otu63": {"^ot:originalLabel": "ruficollis"}, "otu64": {"^ot:originalLabel": "mintoni"}, "otu65": {"^ot:originalLabel": "plumbeus"}, "otu66": {"^ot:originalLabel": "gilvicollis"}, "otu67": {"^ot:originalLabel": "Poliehierax insignis", "^ot:ottId": 3596147, "^ot:ottTaxonName": "Polihierax insignis"}, "otu68": {"^ot:originalLabel": "Falco sparverius", "^ot:ottId": 964519, "^ot:ottTaxonName": "Falco sparverius"}, "otu69": {"^ot:originalLabel": "Falco aesalon", "^ot:ottId": 786443, "^ot:ottTaxonName": "Falco columbarius"}, "otu7": {"^ot:originalLabel": "amurensis"}, "otu70": {"^ot:originalLabel": "Falco columbarius", "^ot:ottId": 786443, "^ot:ottTaxonName": "Falco columbarius"}, "otu71": {"^ot:originalLabel": "Falco dickinsoni", "^ot:ottId": 775464, "^ot:ottTaxonName": "Falco dickinsoni"}, "otu72": {"^ot:originalLabel": "Falco ardosiaceus", "^ot:ottId": 3596132, "^ot:ottTaxonName": "Falco ardosiaceus"}, "otu73": {"^ot:originalLabel": "Falco amurensis", "^ot:ottId": 352517, "^ot:ottTaxonName": "Falco amurensis"}, "otu74": {"^ot:originalLabel": "Falco vespertinus", "^ot:ottId": 964523, "^ot:ottTaxonName": "Falco vespertinus"}, "otu75": {"^ot:originalLabel": "Falco berigora", "^ot:ottId": 877343, "^ot:ottTaxonName": "Falco berigora"}, "otu76": {"^ot:originalLabel": "Falco rufigularis", "^ot:ottId": 582950, "^ot:ottTaxonName": "Falco rufigularis"}, "otu77": {"^ot:originalLabel": "Falco deiroleucus", "^ot:ottId": 302610, "^ot:ottTaxonName": "Falco deiroleucus"}, "otu78": {"^ot:originalLabel": "Falco longipennis", "^ot:ottId": 728397, "^ot:ottTaxonName": "Falco longipennis"}, "otu79": {"^ot:originalLabel": "Falco cuvieri", "^ot:ottId": 302608, "^ot:ottTaxonName": "Falco cuvierii"}, "otu8": {"^ot:originalLabel": "vespertinus"}, "otu80": {"^ot:originalLabel": "Falco subbuteo", "^ot:ottId": 137527, "^ot:ottTaxonName": "Falco subbuteo"}, "otu81": {"^ot:originalLabel": "Falco concolor", "^ot:ottId": 352518, "^ot:ottTaxonName": "Falco concolor"}, "otu82": {"^ot:originalLabel": "Falco eleonorae", "^ot:ottId": 352519, "^ot:ottTaxonName": "Falco eleonorae"}, "otu83": {"^ot:originalLabel": "Falco severus", "^ot:ottId": 3596139, "^ot:ottTaxonName": "Falco severus"}, "otu84": {"^ot:originalLabel": "Falco chicquera", "^ot:ottId": 352520, "^ot:ottTaxonName": "Falco chicquera"}, "otu85": {"^ot:originalLabel": "Falco peregrinus", "^ot:ottId": 786435, "^ot:ottTaxonName": "Falco peregrinus"}, "otu86": {"^ot:originalLabel": "Falco pelegrinoides", "^ot:ottId": 786435, "^ot:ottTaxonName": "Falco peregrinus"}, "otu87": {"^ot:originalLabel": "Falco fasciinucha", "^ot:ottId": 552408, "^ot:ottTaxonName": "Falco fasciinucha"}, "otu88": {"^ot:originalLabel": "Falco biarmicus", "^ot:ottId": 48174, "^ot:ottTaxonName": "Falco biarmicus"}, "otu89": {"^ot:originalLabel": "Falco cherrug", "^ot:ottId": 1001807, "^ot:ottTaxonName": "Falco cherrug"}, "otu9": {"^ot:originalLabel": "berigora"}, "otu90": {"^ot:originalLabel": "Falco rusticolus", "^ot:ottId": 759238, "^ot:ottTaxonName": "Falco rusticolus"}, "otu91": {"^ot:originalLabel": "Falco subniger", "^ot:ottId": 877345, "^ot:ottTaxonName": "Falco subniger"}, "otu92": {"^ot:originalLabel": "Falco jugger", "^ot:ottId": 518152, "^ot:ottTaxonName": "Falco jugger"}, "otu93": {"^ot:originalLabel": "Falco hypoleucos", "^ot:ottId": 3596135, "^ot:ottTaxonName": "Falco hypoleucos"}, "otu94": {"^ot:originalLabel": "Falco mexicanus", "^ot:ottId": 183625, "^ot:ottTaxonName": "Falco mexicanus"}, "otu95": {"^ot:originalLabel": "Falco femoralis", "^ot:ottId": 438663, "^ot:ottTaxonName": "Falco femoralis"}, "otu96": {"^ot:originalLabel": "Falco novaeseelandiae", "^ot:ottId": 877341, "^ot:ottTaxonName": "Falco novaeseelandiae"}, "otu97": {"^ot:originalLabel": "Falco zoniventris", "^ot:ottId": 352521, "^ot:ottTaxonName": "Falco zoniventris"}, "otu98": {"^ot:originalLabel": "Falco alopex", "^ot:ottId": 3596144, "^ot:ottTaxonName": "Falco alopex"}, "otu99": {"^ot:originalLabel": "Falco rupicoloides", "^ot:ottId": 624973, "^ot:ottTaxonName": "Falco rupicoloides"}}}}, "treesById": {"trees1": {"@otus": "otus1", "^ot:treeElementOrder": ["tree1"], "treeById": {"tree1": {"@label": "Untitled (tree1)", "@xsi:type": "nex:FloatTree", "^ot:branchLengthDescription": "", "^ot:branchLengthMode": "ot:time", "^ot:branchLengthTimeUnit": "Myr", "^ot:curatedType": "", "^ot:inGroupClade": "node1", "^ot:nodeLabelMode": "", "^ot:nodeLabelTimeUnit": "", "^ot:outGroupEdge": "", "^ot:reasonsToExcludeFromSynthesis": [], "^ot:rootNodeId": "node1", "^ot:specifiedRoot": "node1", "^ot:tag": [], "^ot:unrootedTree": false, "edgeBySourceId": {"node1": {"edge1": {"@length": 5.922591, "@source": "node1", "@target": "node2"}, "edge116": {"@length": 10.787033, "@source": "node1", "@target": "node117"}}, "node10": {"edge10": {"@length": 0.240466, "@source": "node10", "@target": "node11"}, "edge17": {"@length": 4.133251, "@source": "node10", "@target": "node18"}}, "node102": {"edge102": {"@length": 6.164373, "@source": "node102", "@target": "node103"}, "edge103": {"@length": 3.377336, "@source": "node102", "@target": "node104"}}, "node104": {"edge104": {"@length": 1.184458, "@source": "node104", "@target": "node105"}, "edge107": {"@length": 0.436788, "@source": "node104", "@target": "node108"}}, "node105": {"edge105": {"@length": 1.602579, "@source": "node105", "@target": "node106"}, "edge106": {"@length": 1.602579, "@source": "node105", "@target": "node107"}}, "node108": {"edge108": {"@length": 1.378596, "@source": "node108", "@target": "node109"}, "edge115": {"@length": 2.350249, "@source": "node108", "@target": "node116"}}, "node109": {"edge109": {"@length": 0.29302, "@source": "node109", "@target": "node110"}, "edge114": {"@length": 0.971652, "@source": "node109", "@target": "node115"}}, "node11": {"edge11": {"@length": 3.940549, "@source": "node11", "@target": "node12"}, "edge14": {"@length": 2.986844, "@source": "node11", "@target": "node15"}}, "node110": {"edge110": {"@length": 0.678632, "@source": "node110", "@target": "node111"}, "edge111": {"@length": 0.464235, "@source": "node110", "@target": "node112"}}, "node112": {"edge112": {"@length": 0.214397, "@source": "node112", "@target": "node113"}, "edge113": {"@length": 0.214397, "@source": "node112", "@target": "node114"}}, "node117": {"edge117": {"@length": 17.455328, "@source": "node117", "@target": "node118"}, "edge118": {"@length": 8.522707, "@source": "node117", "@target": "node119"}}, "node119": {"edge119": {"@length": 5.146121, "@source": "node119", "@target": "node120"}, "edge124": {"@length": 5.731641, "@source": "node119", "@target": "node125"}}, "node12": {"edge12": {"@length": 0.763854, "@source": "node12", "@target": "node13"}, "edge13": {"@length": 0.763854, "@source": "node12", "@target": "node14"}}, "node120": {"edge120": {"@length": 3.786501, "@source": "node120", "@target": "node121"}, "edge121": {"@length": 1.249409, "@source": "node120", "@target": "node122"}}, "node122": {"edge122": {"@length": 2.537092, "@source": "node122", "@target": "node123"}, "edge123": {"@length": 2.537092, "@source": "node122", "@target": "node124"}}, "node125": {"edge125": {"@length": 0.215132, "@source": "node125", "@target": "node126"}, "edge128": {"@length": 0.616858, "@source": "node125", "@target": "node129"}}, "node126": {"edge126": {"@length": 2.985849, "@source": "node126", "@target": "node127"}, "edge127": {"@length": 2.985849, "@source": "node126", "@target": "node128"}}, "node129": {"edge129": {"@length": 2.584122, "@source": "node129", "@target": "node130"}, "edge130": {"@length": 2.584122, "@source": "node129", "@target": "node131"}}, "node15": {"edge15": {"@length": 1.717558, "@source": "node15", "@target": "node16"}, "edge16": {"@length": 1.717558, "@source": "node15", "@target": "node17"}}, "node18": {"edge18": {"@length": 0.811618, "@source": "node18", "@target": "node19"}, "edge19": {"@length": 0.811618, "@source": "node18", "@target": "node20"}}, "node2": {"edge2": {"@length": 6.286324, "@source": "node2", "@target": "node3"}, "edge95": {"@length": 4.720344, "@source": "node2", "@target": "node96"}}, "node21": {"edge21": {"@length": 4.808016, "@source": "node21", "@target": "node22"}, "edge22": {"@length": 0.332673, "@source": "node21", "@target": "node23"}}, "node23": {"edge23": {"@length": 1.31907, "@source": "node23", "@target": "node24"}, "edge38": {"@length": 0.382492, "@source": "node23", "@target": "node39"}}, "node24": {"edge24": {"@length": 1.545804, "@source": "node24", "@target": "node25"}, "edge27": {"@length": 1.098911, "@source": "node24", "@target": "node28"}}, "node25": {"edge25": {"@length": 1.610469, "@source": "node25", "@target": "node26"}, "edge26": {"@length": 1.610469, "@source": "node25", "@target": "node27"}}, "node28": {"edge28": {"@length": 2.057363, "@source": "node28", "@target": "node29"}, "edge29": {"@length": 0.568527, "@source": "node28", "@target": "node30"}}, "node3": {"edge3": {"@length": 3.123207, "@source": "node3", "@target": "node4"}, "edge84": {"@length": 4.077777, "@source": "node3", "@target": "node85"}}, "node30": {"edge30": {"@length": 0.343818, "@source": "node30", "@target": "node31"}, "edge37": {"@length": 1.488836, "@source": "node30", "@target": "node38"}}, "node31": {"edge31": {"@length": 0.124423, "@source": "node31", "@target": "node32"}, "edge36": {"@length": 1.145017, "@source": "node31", "@target": "node37"}}, "node32": {"edge32": {"@length": 0.531875, "@source": "node32", "@target": "node33"}, "edge35": {"@length": 1.020594, "@source": "node32", "@target": "node36"}}, "node33": {"edge33": {"@length": 0.488719, "@source": "node33", "@target": "node34"}, "edge34": {"@length": 0.488719, "@source": "node33", "@target": "node35"}}, "node39": {"edge39": {"@length": 0.570693, "@source": "node39", "@target": "node40"}, "edge60": {"@length": 1.363322, "@source": "node39", "@target": "node61"}}, "node4": {"edge4": {"@length": 12.910238, "@source": "node4", "@target": "node5"}, "edge5": {"@length": 6.273565, "@source": "node4", "@target": "node6"}}, "node40": {"edge40": {"@length": 3.522159, "@source": "node40", "@target": "node41"}, "edge41": {"@length": 1.148669, "@source": "node40", "@target": "node42"}}, "node42": {"edge42": {"@length": 0.364556, "@source": "node42", "@target": "node43"}, "edge59": {"@length": 2.37349, "@source": "node42", "@target": "node60"}}, "node43": {"edge43": {"@length": 0.415446, "@source": "node43", "@target": "node44"}, "edge58": {"@length": 2.008934, "@source": "node43", "@target": "node59"}}, "node44": {"edge44": {"@length": 0.96125, "@source": "node44", "@target": "node45"}, "edge49": {"@length": 0.972881, "@source": "node44", "@target": "node50"}}, "node45": {"edge45": {"@length": 0.451356, "@source": "node45", "@target": "node46"}, "edge48": {"@length": 0.632239, "@source": "node45", "@target": "node49"}}, "node46": {"edge46": {"@length": 0.180883, "@source": "node46", "@target": "node47"}, "edge47": {"@length": 0.180883, "@source": "node46", "@target": "node48"}}, "node50": {"edge50": {"@length": 0.186244, "@source": "node50", "@target": "node51"}, "edge55": {"@length": 0.177566, "@source": "node50", "@target": "node56"}}, "node51": {"edge51": {"@length": 0.434362, "@source": "node51", "@target": "node52"}, "edge52": {"@length": 0.265701, "@source": "node51", "@target": "node53"}}, "node53": {"edge53": {"@length": 0.168661, "@source": "node53", "@target": "node54"}, "edge54": {"@length": 0.168661, "@source": "node53", "@target": "node55"}}, "node56": {"edge56": {"@length": 0.443041, "@source": "node56", "@target": "node57"}, "edge57": {"@length": 0.443041, "@source": "node56", "@target": "node58"}}, "node6": {"edge6": {"@length": 0.712123, "@source": "node6", "@target": "node7"}, "edge63": {"@length": 1.322511, "@source": "node6", "@target": "node64"}}, "node61": {"edge61": {"@length": 2.729529, "@source": "node61", "@target": "node62"}, "edge62": {"@length": 2.729529, "@source": "node61", "@target": "node63"}}, "node64": {"edge64": {"@length": 5.314162, "@source": "node64", "@target": "node65"}, "edge65": {"@length": 1.485294, "@source": "node64", "@target": "node66"}}, "node66": {"edge66": {"@length": 0.413042, "@source": "node66", "@target": "node67"}, "edge83": {"@length": 3.828868, "@source": "node66", "@target": "node84"}}, "node67": {"edge67": {"@length": 3.415826, "@source": "node67", "@target": "node68"}, "edge68": {"@length": 1.242083, "@source": "node67", "@target": "node69"}}, "node69": {"edge69": {"@length": 2.173743, "@source": "node69", "@target": "node70"}, "edge70": {"@length": 0.267927, "@source": "node69", "@target": "node71"}}, "node7": {"edge7": {"@length": 5.92455, "@source": "node7", "@target": "node8"}, "edge8": {"@length": 0.692645, "@source": "node7", "@target": "node9"}}, "node71": {"edge71": {"@length": 0.825963, "@source": "node71", "@target": "node72"}, "edge76": {"@length": 0.362901, "@source": "node71", "@target": "node77"}}, "node72": {"edge72": {"@length": 0.728236, "@source": "node72", "@target": "node73"}, "edge75": {"@length": 1.079853, "@source": "node72", "@target": "node76"}}, "node73": {"edge73": {"@length": 0.351618, "@source": "node73", "@target": "node74"}, "edge74": {"@length": 0.351618, "@source": "node73", "@target": "node75"}}, "node77": {"edge77": {"@length": 1.542915, "@source": "node77", "@target": "node78"}, "edge78": {"@length": 0.441476, "@source": "node77", "@target": "node79"}}, "node79": {"edge79": {"@length": 1.101439, "@source": "node79", "@target": "node80"}, "edge80": {"@length": 0.464837, "@source": "node79", "@target": "node81"}}, "node81": {"edge81": {"@length": 0.636602, "@source": "node81", "@target": "node82"}, "edge82": {"@length": 0.636602, "@source": "node81", "@target": "node83"}}, "node85": {"edge85": {"@length": 11.955669, "@source": "node85", "@target": "node86"}, "edge86": {"@length": 7.541778, "@source": "node85", "@target": "node87"}}, "node87": {"edge87": {"@length": 1.762211, "@source": "node87", "@target": "node88"}, "edge94": {"@length": 4.413891, "@source": "node87", "@target": "node95"}}, "node88": {"edge88": {"@length": 0.875605, "@source": "node88", "@target": "node89"}, "edge91": {"@length": 1.073078, "@source": "node88", "@target": "node92"}}, "node89": {"edge89": {"@length": 1.776075, "@source": "node89", "@target": "node90"}, "edge90": {"@length": 1.776075, "@source": "node89", "@target": "node91"}}, "node9": {"edge20": {"@length": 0.423889, "@source": "node9", "@target": "node21"}, "edge9": {"@length": 0.287036, "@source": "node9", "@target": "node10"}}, "node92": {"edge92": {"@length": 1.578602, "@source": "node92", "@target": "node93"}, "edge93": {"@length": 1.578602, "@source": "node92", "@target": "node94"}}, "node96": {"edge96": {"@length": 17.599425, "@source": "node96", "@target": "node97"}, "edge97": {"@length": 9.298704, "@source": "node96", "@target": "node98"}}, "node98": {"edge101": {"@length": 2.136348, "@source": "node98", "@target": "node102"}, "edge98": {"@length": 7.487897, "@source": "node98", "@target": "node99"}}, "node99": {"edge100": {"@length": 0.812823, "@source": "node99", "@target": "node101"}, "edge99": {"@length": 0.812823, "@source": "node99", "@target": "node100"}}}, "nodeById": {"node1": {"@root": true}, "node10": {}, "node100": {"@otu": "otu115"}, "node101": {"@otu": "otu116"}, "node102": {}, "node103": {"@otu": "otu117"}, "node104": {}, "node105": {}, "node106": {"@otu": "otu118"}, "node107": {"@otu": "otu119"}, "node108": {}, "node109": {}, "node11": {}, "node110": {}, "node111": {"@otu": "otu120"}, "node112": {}, "node113": {"@otu": "otu121"}, "node114": {"@otu": "otu122"}, "node115": {"@otu": "otu123"}, "node116": {"@otu": "otu124"}, "node117": {}, "node118": {"@otu": "otu125"}, "node119": {}, "node12": {}, "node120": {}, "node121": {"@otu": "otu126"}, "node122": {}, "node123": {"@otu": "otu127"}, "node124": {"@otu": "otu128"}, "node125": {}, "node126": {}, "node127": {"@otu": "otu129"}, "node128": {"@otu": "otu130"}, "node129": {}, "node13": {"@otu": "otu69"}, "node130": {"@otu": "otu131"}, "node131": {"@otu": "otu132"}, "node14": {"@otu": "otu70"}, "node15": {}, "node16": {"@otu": "otu71"}, "node17": {"@otu": "otu72"}, "node18": {}, "node19": {"@otu": "otu73"}, "node2": {}, "node20": {"@otu": "otu74"}, "node21": {}, "node22": {"@otu": "otu75"}, "node23": {}, "node24": {}, "node25": {}, "node26": {"@otu": "otu76"}, "node27": {"@otu": "otu77"}, "node28": {}, "node29": {"@otu": "otu78"}, "node3": {}, "node30": {}, "node31": {}, "node32": {}, "node33": {}, "node34": {"@otu": "otu79"}, "node35": {"@otu": "otu80"}, "node36": {"@otu": "otu81"}, "node37": {"@otu": "otu82"}, "node38": {"@otu": "otu83"}, "node39": {}, "node4": {}, "node40": {}, "node41": {"@otu": "otu84"}, "node42": {}, "node43": {}, "node44": {}, "node45": {}, "node46": {}, "node47": {"@otu": "otu85"}, "node48": {"@otu": "otu86"}, "node49": {"@otu": "otu87"}, "node5": {"@otu": "otu67"}, "node50": {}, "node51": {}, "node52": {"@otu": "otu88"}, "node53": {}, "node54": {"@otu": "otu89"}, "node55": {"@otu": "otu90"}, "node56": {}, "node57": {"@otu": "otu91"}, "node58": {"@otu": "otu92"}, "node59": {"@otu": "otu93"}, "node6": {}, "node60": {"@otu": "otu94"}, "node61": {}, "node62": {"@otu": "otu95"}, "node63": {"@otu": "otu96"}, "node64": {}, "node65": {"@otu": "otu97"}, "node66": {}, "node67": {}, "node68": {"@otu": "otu98"}, "node69": {}, "node7": {}, "node70": {"@otu": "otu99"}, "node71": {}, "node72": {}, "node73": {}, "node74": {"@otu": "otu100"}, "node75": {"@otu": "otu101"}, "node76": {"@otu": "otu102"}, "node77": {}, "node78": {"@otu": "otu103"}, "node79": {}, "node8": {"@otu": "otu68"}, "node80": {"@otu": "otu104"}, "node81": {}, "node82": {"@otu": "otu105"}, "node83": {"@otu": "otu106"}, "node84": {"@otu": "otu107"}, "node85": {}, "node86": {"@otu": "otu108"}, "node87": {}, "node88": {}, "node89": {}, "node9": {}, "node90": {"@otu": "otu109"}, "node91": {"@otu": "otu110"}, "node92": {}, "node93": {"@otu": "otu111"}, "node94": {"@otu": "otu112"}, "node95": {"@otu": "otu113"}, "node96": {}, "node97": {"@otu": "otu114"}, "node98": {}, "node99": {}}}}}}}}, "branch2sha": {"master": "c33806c9ee11db205ee8c02a42e31b1c3128e299"}, "commentHTML": "", "duplicateStudyIDs": [], "shardName": "phylesystem-1", "versionHistory": [{"id": "a8cce160749fedd09d039cdf74da221d889497be", "author_name": "James Waterford", "author_email": "jwaterford@ucsd.edu", "date": "Fri, 11 Aug 2023 03:21:35 +0000", "date_ISO_8601": "2023-08-11 03:21:35 +0000", "relative_date": "2 years, 9 months ago", "message_subject": "Mapped tips to CLO Taxa", "message_body": "(Update document 'ot_2090' via OpenTree API)"}, {"id": "c1502506fbdcb8436b26af34985d45051365f1eb", "author_name": "eliotmiller", "author_email": "ANONYMOUS", "date": "Thu, 22 Dec 2022 13:59:45 +0000", "date_ISO_8601": "2022-12-22 13:59:45 +0000", "relative_date": "3 years, 4 months ago", "message_subject": "Update document 'ot_2090' via OpenTree API"}, {"id": "890a35ac924175c41bfd1e3d329618999826a383", "author_name": "eliotmiller", "author_email": "ANONYMOUS", "date": "Thu, 5 May 2022 19:13:43 +0000", "date_ISO_8601": "2022-05-05 19:13:43 +0000", "relative_date": "4 years ago", "message_subject": "Update document 'ot_2090' via OpenTree API"}, {"id": "550483e34d8e0c647c341d69a0beb5a56f9de5db", "author_name": "eliotmiller", "author_email": "ANONYMOUS", "date": "Thu, 5 May 2022 19:13:15 +0000", "date_ISO_8601": "2022-05-05 19:13:15 +0000", "relative_date": "4 years ago", "message_subject": "Update document 'ot_2090' via OpenTree API"}, {"id": "e8048a7e0350b7f1343ce199dad8a064250d0234", "author_name": "eliotmiller", "author_email": "ANONYMOUS", "date": "Thu, 5 May 2022 19:08:26 +0000", "date_ISO_8601": "2022-05-05 19:08:26 +0000", "relative_date": "4 years ago", "message_subject": "Manually added genus names", "message_body": "Used R to manually add genus names to file emailed directly by author (Fuchs). Fuzzy matching fixed a typo or two. All matched in end.\n\n(Update document 'ot_2090' via OpenTree API)"}, {"id": "1bb3a7de2e7bc2214b43eb68e01c711a9e673f8b", "author_name": "eliotmiller", "author_email": "ANONYMOUS", "date": "Thu, 5 May 2022 17:10:22 +0000", "date_ISO_8601": "2022-05-05 17:10:22 +0000", "relative_date": "4 years ago", "message_subject": "Saving work", "message_body": "(Update document 'ot_2090' via OpenTree API)"}, {"id": "d2e46415901d72d513672c8359d02277d9a46117", "author_name": "eliotmiller", "author_email": "ANONYMOUS", "date": "Thu, 5 May 2022 15:03:31 +0000", "date_ISO_8601": "2022-05-05 15:03:31 +0000", "relative_date": "4 years ago", "message_subject": "Update document 'ot_2090' via OpenTree API"}]}