pythonVersion 2.7.16 pythonImplementation CPython false Birds $1 ^(\S*\s+\S*).* false Source data for tree(s) 'tree1' tree1 otu1 otu2 otu10 otu11 otu100 otu99 otu101 otu102 otu103 otu104 otu105 otu106 otu107 otu108 otu109 otu110 otu111 otu112 otu113 otu114 otu115 otu116 otu125 otu126 otu143 otu144 otu146 otu147 otu150 otu151 otu157 otu158 otu161 otu162 otu117 otu118 otu12 otu13 otu121 otu122 otu123 otu124 otu127 otu128 otu129 otu130 otu131 otu132 otu133 otu134 otu135 otu136 otu137 otu138 otu139 otu140 otu145 otu14 otu15 otu18 otu19 otu141 otu142 otu148 otu149 otu153 otu154 otu155 otu156 otu159 otu160 otu16 otu17 otu165 otu166 otu167 otu168 otu170 otu171 otu174 otu175 otu20 otu21 otu22 otu23 otu24 otu25 otu28 otu29 otu3 otu4 otu30 otu31 otu39 otu40 otu32 otu33 otu34 otu35 otu36 otu37 otu38 otu41 otu42 otu45 otu46 otu47 otu48 otu5 otu6 otu50 otu51 otu54 otu55 otu56 otu58 otu59 otu61 otu62 otu63 otu64 otu65 otu66 otu67 otu68 otu71 otu72 otu73 otu74 otu69 otu70 otu7 otu8 otu76 otu77 otu78 otu79 otu82 otu83 otu86 otu87 otu93 otu94 otu90 otu91 otu95 otu96 otu97 otu98 ^ot:comment ^ot:nodeLabelMode ^ot:nodeLabelTimeUnit ^ot:reasonsToExcludeFromSynthesis rootedge eliotmiller Emily Jane McTavish 662954 Alaudidae ot_2230 Alström, P., Mohammadi, Z., Enbody, E., Irestedt, M., Engelbrecht, D., Crochet, P.-A., Guillaumet, A., Rancilhac, L., Tieleman, B. I., Olsson, U., Donald, P. F., & Stervander, M. (2023). Systematics of the avian family Alaudidae using multilocus and genomic data. Avian Research, 100095. https://doi.org/10.1016/j.avrs.2023.100095 2023 Alaemon alaudipes U5653 1079834 Alaemon alaudipes Alauda razae 2 3597500 Alauda razae Heteromirafra ruddi U5661 3597579 Heteromirafra ruddi Lullula arborea AY165158 781902 Lullula arborea Lullula arborea U544 781902 Lullula arborea Melanocorypha bimaculata U2282 580150 Melanocorypha bimaculata Melanocorypha bimaculata U2283 580150 Melanocorypha bimaculata Melanocorypha calandra 2733 110605 Melanocorypha calandra Melanocorypha calandra U0583 110605 Melanocorypha calandra Melanocorypha maxima U578 3597557 Melanocorypha maxima Melanocorypha maxima U588 3597557 Melanocorypha maxima Melanocorypha mongolica NC036760 518141 Melanocorypha mongolica Alauda razae SYSUS2265 3597500 Alauda razae Melanocorypha mongolica UWBM59839 518141 Melanocorypha mongolica Melanocorypha yeltoniensis U575 3597558 Melanocorypha yeltoniensis Melanocorypha yeltoniensis U580 3597558 Melanocorypha yeltoniensis Mirafra affinis 2 3597527 Mirafra affinis Mirafra affinis U3268 3597527 Mirafra affinis Mirafra africana 10 99164 Mirafra africana Mirafra africana 5 99164 Mirafra africana Mirafra albicauda 49 3597523 Mirafra albicauda Mirafra albicauda 9488 3597523 Mirafra albicauda Mirafra angolensis MA1 3597516 Mirafra angolensis Alaudala cheleensis U5316 947048 Alaudala cheleensis Mirafra apiata KC869741 3597522 Mirafra apiata Mirafra ashi 1106 3597530 Mirafra ashi Mirafra ashi 1144 3597530 Mirafra ashi Mirafra assamica 2 63797 Mirafra assamica Mirafra assamica U3269 63797 Mirafra assamica Mirafra athi U4592 99164 Mirafra africana Mirafra athi U4595 99164 Mirafra africana Mirafra cheniana P192 3597528 Mirafra cheniana Mirafra cheniana U5759 3597528 Mirafra cheniana Mirafra collaris 2633 3597537 Mirafra collaris Alaudala cheleensis U608 947048 Alaudala cheleensis Mirafra collaris 2634 3597537 Mirafra collaris Mirafra cordofanica 1084 3597539 Mirafra cordofanica Mirafra cordofanica 1094 3597539 Mirafra cordofanica Mirafra erythrocephala 2 3597531 Mirafra erythrocephala Mirafra erythrocephala U3270 3597531 Mirafra erythrocephala Mirafra erythroptera 98 3597526 Mirafra erythroptera Mirafra erythroptera U3271 3597526 Mirafra erythroptera Mirafra fasciolata U2345 3597524 Mirafra fasciolata Mirafra fasciolata U5758 3597524 Mirafra fasciolata Mirafra hypermetra 2812 3597525 Mirafra hypermetra Alaudala heinei LMC9788 781908 Calandrella rufescens Mirafra hypermetra 317 3597525 Mirafra hypermetra Mirafra javanica U3273 781904 Mirafra javanica Mirafra javanica williamsoni 781904 Mirafra javanica Mirafra kabalii 1043 99164 Mirafra africana Mirafra kabalii 1085 99164 Mirafra africana Mirafra kidepoensis 16 3597525 Mirafra hypermetra Mirafra kurrae 1092 99164 Mirafra africana Mirafra kurrae 1109 99164 Mirafra africana Mirafra microptera 96 3597541 Mirafra microptera Mirafra microptera U3275 3597541 Mirafra microptera Alaudala heinei U585 781908 Calandrella rufescens Mirafra nyikae 1067 99164 Mirafra africana Mirafra nyikae 1079 99164 Mirafra africana Mirafra passerina 1 156658 Mirafra passerina Mirafra rufa 1070 3597534 Mirafra rufa Mirafra rufa 253 3597534 Mirafra rufa Mirafra rufocinnamomea FLTz 3597521 Mirafra rufocinnamomea Mirafra rufocinnamomea U5657 3597521 Mirafra rufocinnamomea Mirafra sharpii 1113 99164 Mirafra africana Mirafra sharpii 1115 99164 Mirafra africana Mirafra somalica 1116 3597532 Mirafra somalica Alaudala raytal U2200 3597511 Calandrella raytal Mirafra somalica 1118 3597532 Mirafra somalica Mirafra tropicalis 1127 99164 Mirafra africana Mirafra tropicalis 1141 99164 Mirafra africana Mirafra williamsi WL1 3597529 Mirafra williamsi Panurus biarmicus NRM966576 3599884 Panurus biarmicus Pinarocorys erythropygia 101081 3597568 Pinarocorys erythropygia Pinarocorys erythropygia 105748 3597568 Pinarocorys erythropygia Pinarocorys nigricans 101105 3597564 Pinarocorys nigricans Pinarocorys nigricans 106597 3597564 Pinarocorys nigricans Prinia flavicans U3818 190126 Prinia flavicans Alaudala raytal U2201 3597511 Calandrella raytal Ramphocoris clotbey CLOT1 3597571 Ramphocoris clotbey Ramphocoris clotbey U5651 3597571 Ramphocoris clotbey Spizocorys conirostris P177 3597542 Spizocorys conirostris Spizocorys fremantlii STL9 7661765 Spizocorys fremantlii Spizocorys fringillaris P179 3597545 Spizocorys fringillaris Spizocorys fringillaris U5659 3597545 Spizocorys fringillaris Spizocorys obbiensis 1104 3597543 Spizocorys obbiensis Spizocorys personata MSKLk6 3597544 Spizocorys personata Spizocorys sclateri 1 156647 Spizocorys sclateri Spizocorys starki 1 781897 Eremalauda starki Alaudala rufescens U5390 781908 Calandrella rufescens Alaudala rufescens ad 781908 Calandrella rufescens Alaemon alaudipes U622 1079834 Alaemon alaudipes Alaudala somalica AST1 3597510 Calandrella somalica Alaudala somalica AY165166 3597510 Calandrella somalica Ammomanes cinctura 2735 207741 Ammomanes cinctura Ammomanes cinctura arenicolor2 207741 Ammomanes cinctura Ammomanes deserti 11 59182 Ammomanes deserti Ammomanes deserti phoenicuroides2 59182 Ammomanes deserti Ammomanes phoenicura 1022 207743 Ammomanes phoenicurus Ammomanopsis grayi 156651 Ammomanes grayi Calandrella acutirostris 17039 947046 Calandrella acutirostris Calandrella acutirostris U577 947046 Calandrella acutirostris Alaemon hamertoni 1002 3597503 Alaemon hamertoni Calandrella blanfordi blanfordi 3597512 Calandrella blanfordi Calandrella blanfordi erlangeri 3597512 Calandrella blanfordi Calandrella brachydactyla Cbra1 947049 Calandrella brachydactyla Calandrella brachydactyla U5655 947049 Calandrella brachydactyla Calandrella c cinerea KX379963 3597513 Calandrella cinerea Calandrella c rufipecta KX379983 3597513 Calandrella cinerea Calandrella cinerea williamsi RC2 3597513 Calandrella cinerea Calandrella dukhunensis U4621 3597513 Calandrella cinerea Calandrella dukhunensis UWBM59838 3597513 Calandrella cinerea Calandrella eremica KX379916 3597512 Calandrella blanfordi Alaemon hamertoni 1020 3597503 Alaemon hamertoni Calandrella eremica daaroodensis 3597512 Calandrella blanfordi Calendulauda africanoides FCL15 3597578 Calendulauda africanoides Calendulauda africanoides P175 3597578 Calendulauda africanoides Calendulauda albescens Pi3 662953 Calendulauda albescens Calendulauda burra P119 3597561 Calendulauda burra Calendulauda erythroclamys AY165167 140582 Calendulauda erythroclamys Calendulauda erythroclamys U5662 140582 Calendulauda erythroclamys Calendulauda gilletti 1050 3597535 Mirafra gilletti Calendulauda gilletti U2808 3597535 Mirafra gilletti Calendulauda poecilosterna PBR4 3597565 Calendulauda poecilosterna Alauda arvensis AY165156 312548 Alauda arvensis Calendulauda sabota P181 156645 Calendulauda sabota Calendulauda sabota U2344 156645 Calendulauda sabota Certhilauda benguelensis P204 3597548 Certhilauda benguelensis Certhilauda chuana P96 140584 Certhilauda chuana Certhilauda curvirostris P214 140583 Certhilauda curvirostris Certhilauda curvirostris P215 140583 Certhilauda curvirostris Certhilauda curvirostris P220 140583 Certhilauda curvirostris Certhilauda subcoronata P219 140587 Certhilauda subcoronata Chersomanes albofasciata P203 156654 Chersomanes albofasciata Chersomanes albofasciata RSA100 156654 Chersomanes albofasciata Alauda arvensis U587 312548 Alauda arvensis Chersomanes beesleyi ShTz 3597502 Chersomanes beesleyi Chersophilus duponti 1016 876889 Chersophilus duponti Chersophilus duponti U2255 876889 Chersophilus duponti Eremalauda dunni dunni BMNH1932 8 6 268 U2606 3597547 Eremalauda dunni Eremalauda dunni dunni JL Copete 3597547 Eremalauda dunni Eremalauda eremodites DUL6 3597547 Eremalauda dunni Eremalauda eremodites U4578 3597547 Eremalauda dunni Eremophila alpestris FMNH351146 998122 Eremophila alpestris Eremophila alpestris U4610 998122 Eremophila alpestris Eremophila bilopha TL5 781906 Eremophila bilopha Alauda gulgula NRM20066712 521612 Alauda gulgula Eremophila bilopha U612 781906 Eremophila bilopha Eremophila longirostris D35 998122 Eremophila alpestris Eremophila longirostris U576 998122 Eremophila alpestris Eremophila penicillata NRM20046759 998122 Eremophila alpestris Eremophila penicillata U615 998122 Eremophila alpestris Eremopterix australis P176 636366 Eremopterix australis Eremopterix griseus U2257 3597555 Eremopterix griseus Eremopterix griseus U2258 3597555 Eremopterix griseus Eremopterix hova FMNH352844 7661738 Eremopterix hova Eremopterix hova FMNH449163 7661738 Eremopterix hova Alauda gulgula U3267 521612 Alauda gulgula Eremopterix leucopareia FFL6 3597550 Eremopterix leucopareia Eremopterix leucotis 36 3597553 Eremopterix leucotis Eremopterix melanauchen U2259 5223356 Eremopterix nigriceps melanauchen Eremopterix melanauchen U2260 5223356 Eremopterix nigriceps melanauchen Eremopterix signatus CHSL 3597554 Eremopterix signatus Eremopterix verticalis 1 140579 Eremopterix verticalis Galerida cristata Iran2 207745 Galerida cristata Galerida cristata b 207745 Galerida cristata Galerida deva 1046 3597507 Galerida deva Galerida magnirostris 1 156649 Galerida magnirostris Alauda leucoptera U579 3597556 Melanocorypha leucoptera Galerida malabarica 1048 839851 Galerida malabarica Galerida malabarica EF445430 839851 Galerida malabarica Galerida modesta VHA1428 3597508 Galerida modesta Galerida randonii 2 207745 Galerida cristata Galerida randonii CL2a 207745 Galerida cristata Galerida theklae erlangeri 1089983 Galerida theklae Galerida theklae ruficolor 1089983 Galerida theklae Heteromirafra archeri KC512763 3597581 Heteromirafra archeri Heteromirafra archeri U2811 3597581 Heteromirafra archeri Heteromirafra ruddi KC869742 3597579 Heteromirafra ruddi ot:time Myr Bayesian inference node3 node1 false true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true