{"sha": "c33806c9ee11db205ee8c02a42e31b1c3128e299", "data": {"nexml": {"@about": "#study", "@generator": "Open Tree API", "@id": "study", "@nexml2json": "0.0.0", "@nexmljson": "http://purl.org/opentree/nexson", "@version": "0.9", "@xmlns": {"$": "http://www.nexml.org/2009", "nex": "http://www.nexml.org/2009", "ot": "http://purl.org/opentree-terms#", "xhtml": "http://www.w3.org/1999/xhtml/vocab#", "xsd": "http://www.w3.org/2001/XMLSchema#", "xsi": "http://www.w3.org/2001/XMLSchema-instance"}, "highestMintedElementIDs": {"agent": 0, "annotation": 0, "edge": 60, "message": 0, "node": 61, "otu": 31, "otus": 2, "tree": 1, "trees": 2}, "otus": {"@id": "otus1", "otu": [{"@id": "otu1", "@about": "#otu1", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Circellium bacchus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 73355}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Circellium bacchus"}]}, {"@id": "otu10", "@about": "#otu10", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Scarabaeus ritchiei"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 3328298}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Mnematium ritchiei"}]}, {"@id": "otu11", "@about": "#otu11", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Scarabaeus silenus"}]}, {"@id": "otu12", "@about": "#otu12", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Scarabaeus multidentatus"}]}, {"@id": "otu13", "@about": "#otu13", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Drepanopodus proximus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 73350}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Drepanopodus proximus"}]}, {"@id": "otu14", "@about": "#otu14", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Pachylomerus femoralis"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 779857}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Pachylomerus femoralis"}]}, {"@id": "otu15", "@about": "#otu15", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Scarabaeus rubripennis"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 205896}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Scarabaeus rubripennis"}]}, {"@id": "otu16", "@about": "#otu16", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Scarabaeus flavicornis"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 205900}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Scarabaeus flavicornis"}]}, {"@id": "otu17", "@about": "#otu17", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Scarabaeus bohemani"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 779865}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Scarabaeus bohemani"}]}, {"@id": "otu18", "@about": "#otu18", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Sceliages hippias"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 831284}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Scarabaeus hippias"}]}, {"@id": "otu19", "@about": "#otu19", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Sceliages adamastor"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 831288}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Scarabaeus adamastor"}]}, {"@id": "otu2", "@about": "#otu2", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Heliocopris hamadryas"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 73357}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Heliocopris hamadryas"}]}, {"@id": "otu20", "@about": "#otu20", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Sceliages brittoni"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 582912}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Scarabaeus brittoni"}]}, {"@id": "otu21", "@about": "#otu21", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Scarabaeus rusticus"}]}, {"@id": "otu22", "@about": "#otu22", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Scarabaeus rugosus"}]}, {"@id": "otu23", "@about": "#otu23", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Kheper nigroaeneus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 73364}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Kheper nigroaeneus"}]}, {"@id": "otu24", "@about": "#otu24", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Kheper lamarcki"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 3328214}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Kheper lamarcki"}]}, {"@id": "otu25", "@about": "#otu25", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Kheper subaeneus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 779853}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Kheper subaeneus"}]}, {"@id": "otu26", "@about": "#otu26", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Scarabaeus galenus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 205895}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Scarabaeus galenus"}]}, {"@id": "otu27", "@about": "#otu27", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Scarabaeus westwoodi"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 205890}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Scarabaeus westwoodi"}]}, {"@id": "otu28", "@about": "#otu28", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Scarabaeus goryi"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 205894}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Scarabaeus goryi"}]}, {"@id": "otu29", "@about": "#otu29", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Scarabaeus satyrus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 205891}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Scarabaeus satyrus"}]}, {"@id": "otu3", "@about": "#otu3", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Synapsis tmolus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 3331560}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Heliocopris bucephalus"}]}, {"@id": "otu30", "@about": "#otu30", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Scarabaeus proboscideus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 25893}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Elephastomus proboscideus"}]}, {"@id": "otu31", "@about": "#otu31", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Scarabaeus zambesianus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 7175620}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Scarabaeus zambesianus"}]}, {"@id": "otu4", "@about": "#otu4", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Eucranium arachnoides"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 73361}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Eucranium arachnoides"}]}, {"@id": "otu5", "@about": "#otu5", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Scarabaeus hippocrates"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 779861}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Pachysoma hippocrates"}]}, {"@id": "otu6", "@about": "#otu6", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Scarabaeus bennigseni"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 779859}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Pachysoma bennigseni"}]}, {"@id": "otu7", "@about": "#otu7", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Scarabaeus denticollis"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 387141}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Pachysoma denticollis"}]}, {"@id": "otu8", "@about": "#otu8", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Scarabaeus rodriguesi"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 68785}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Pachysoma rodriguesi"}]}, {"@id": "otu9", "@about": "#otu9", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Scarabaeus scholtzi"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 3328247}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Scarabaeolus scholtzi"}]}], "@about": "#otus1"}, "trees": {"@otus": "otus1", "@id": "trees1", "tree": [{"@label": "Fig. 2, MP", "@xsi:type": "nex:FloatTree", "node": [{"@root": true, "@id": "node1", "@about": "#node1"}, {"@otu": "otu1", "@id": "node2", "@about": "#node2", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node3", "@about": "#node3"}, {"@id": "node4", "@about": "#node4"}, {"@otu": "otu2", "@id": "node5", "@about": "#node5", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu3", "@id": "node6", "@about": "#node6", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node7", "@about": "#node7"}, {"@otu": "otu4", "@id": "node8", "@about": "#node8", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node9", "@about": "#node9"}, {"@id": "node17", "@about": "#node17"}, {"@otu": "otu9", "@id": "node18", "@about": "#node18", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node19", "@about": "#node19"}, {"@otu": "otu10", "@id": "node20", "@about": "#node20", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node21", "@about": "#node21"}, {"@otu": "otu11", "@id": "node22", "@about": "#node22", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node23", "@about": "#node23"}, {"@otu": "otu12", "@id": "node24", "@about": "#node24", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node25", "@about": "#node25"}, {"@otu": "otu13", "@id": "node26", "@about": "#node26", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node27", "@about": "#node27"}, {"@otu": "otu14", "@id": "node28", "@about": "#node28", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node29", "@about": "#node29"}, {"@otu": "otu15", "@id": "node30", "@about": "#node30", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node31", "@about": "#node31"}, {"@otu": "otu16", "@id": "node32", "@about": "#node32", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node33", "@about": "#node33"}, {"@otu": "otu17", "@id": "node34", "@about": "#node34", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node35", "@about": "#node35"}, {"@id": "node36", "@about": "#node36"}, {"@otu": "otu18", "@id": "node37", "@about": "#node37", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node38", "@about": "#node38"}, {"@otu": "otu19", "@id": "node39", "@about": "#node39", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu20", "@id": "node40", "@about": "#node40", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node41", "@about": "#node41"}, {"@otu": "otu21", "@id": "node42", "@about": "#node42", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node43", "@about": "#node43"}, {"@otu": "otu22", "@id": "node44", "@about": "#node44", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node45", "@about": "#node45"}, {"@id": "node46", "@about": "#node46"}, {"@otu": "otu23", "@id": "node47", "@about": "#node47", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node48", "@about": "#node48"}, {"@otu": "otu24", "@id": "node49", "@about": "#node49", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu25", "@id": "node50", "@about": "#node50", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node51", "@about": "#node51"}, {"@id": "node52", "@about": "#node52"}, {"@otu": "otu26", "@id": "node53", "@about": "#node53", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu27", "@id": "node54", "@about": "#node54", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node55", "@about": "#node55"}, {"@otu": "otu28", "@id": "node56", "@about": "#node56", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node57", "@about": "#node57"}, {"@otu": "otu29", "@id": "node58", "@about": "#node58", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node59", "@about": "#node59"}, {"@otu": "otu30", "@id": "node60", "@about": "#node60", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu31", "@id": "node61", "@about": "#node61", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node10", "@about": "#node10"}, {"@otu": "otu5", "@id": "node11", "@about": "#node11", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node12", "@about": "#node12"}, {"@otu": "otu6", "@id": "node13", "@about": "#node13", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node14", "@about": "#node14"}, {"@otu": "otu7", "@id": "node15", "@about": "#node15", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu8", "@id": "node16", "@about": "#node16", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}], "edge": [{"@source": "node1", "@target": "node2", "@id": "edge1", "@about": "#edge1"}, {"@source": "node1", "@target": "node3", "@id": "edge2", "@about": "#edge2"}, {"@source": "node3", "@target": "node4", "@id": "edge3", "@about": "#edge3"}, {"@source": "node4", "@target": "node5", "@id": "edge4", "@about": "#edge4"}, {"@source": "node4", "@target": "node6", "@id": "edge5", "@about": "#edge5"}, {"@source": "node3", "@target": "node7", "@id": "edge6", "@about": "#edge6"}, {"@source": "node7", "@target": "node8", "@id": "edge7", "@about": "#edge7"}, {"@source": "node7", "@target": "node9", "@id": "edge8", "@about": "#edge8"}, {"@source": "node9", "@target": "node17", "@id": "edge16", "@about": "#edge16"}, {"@source": "node17", "@target": "node18", "@id": "edge17", "@about": "#edge17"}, {"@source": "node17", "@target": "node19", "@id": "edge18", "@about": "#edge18"}, {"@source": "node19", "@target": "node20", "@id": "edge19", "@about": "#edge19"}, {"@source": "node19", "@target": "node21", "@id": "edge20", "@about": "#edge20"}, {"@source": "node21", "@target": "node22", "@id": "edge21", "@about": "#edge21"}, {"@source": "node21", "@target": "node23", "@id": "edge22", "@about": "#edge22"}, {"@source": "node23", "@target": "node24", "@id": "edge23", "@about": "#edge23"}, {"@source": "node23", "@target": "node25", "@id": "edge24", "@about": "#edge24"}, {"@source": "node25", "@target": "node26", "@id": "edge25", "@about": "#edge25"}, {"@source": "node25", "@target": "node27", "@id": "edge26", "@about": "#edge26"}, {"@source": "node27", "@target": "node28", "@id": "edge27", "@about": "#edge27"}, {"@source": "node27", "@target": "node29", "@id": "edge28", "@about": "#edge28"}, {"@source": "node29", "@target": "node30", "@id": "edge29", "@about": "#edge29"}, {"@source": "node29", "@target": "node31", "@id": "edge30", "@about": "#edge30"}, {"@source": "node31", "@target": "node32", "@id": "edge31", "@about": "#edge31"}, {"@source": "node31", "@target": "node33", "@id": "edge32", "@about": "#edge32"}, {"@source": "node33", "@target": "node34", "@id": "edge33", "@about": "#edge33"}, {"@source": "node33", "@target": "node35", "@id": "edge34", "@about": "#edge34"}, {"@source": "node35", "@target": "node36", "@id": "edge35", "@about": "#edge35"}, {"@source": "node36", "@target": "node37", "@id": "edge36", "@about": "#edge36"}, {"@source": "node36", "@target": "node38", "@id": "edge37", "@about": "#edge37"}, {"@source": "node38", "@target": "node39", "@id": "edge38", "@about": "#edge38"}, {"@source": "node38", "@target": "node40", "@id": "edge39", "@about": "#edge39"}, {"@source": "node35", "@target": "node41", "@id": "edge40", "@about": "#edge40"}, {"@source": "node41", "@target": "node42", "@id": "edge41", "@about": "#edge41"}, {"@source": "node41", "@target": "node43", "@id": "edge42", "@about": "#edge42"}, {"@source": "node43", "@target": "node44", "@id": "edge43", "@about": "#edge43"}, {"@source": "node43", "@target": "node45", "@id": "edge44", "@about": "#edge44"}, {"@source": "node45", "@target": "node46", "@id": "edge45", "@about": "#edge45"}, {"@source": "node46", "@target": "node47", "@id": "edge46", "@about": "#edge46"}, {"@source": "node46", "@target": "node48", "@id": "edge47", "@about": "#edge47"}, {"@source": "node48", "@target": "node49", "@id": "edge48", "@about": "#edge48"}, {"@source": "node48", "@target": "node50", "@id": "edge49", "@about": "#edge49"}, {"@source": "node45", "@target": "node51", "@id": "edge50", "@about": "#edge50"}, {"@source": "node51", "@target": "node52", "@id": "edge51", "@about": "#edge51"}, {"@source": "node52", "@target": "node53", "@id": "edge52", "@about": "#edge52"}, {"@source": "node52", "@target": "node54", "@id": "edge53", "@about": "#edge53"}, {"@source": "node51", "@target": "node55", "@id": "edge54", "@about": "#edge54"}, {"@source": "node55", "@target": "node56", "@id": "edge55", "@about": "#edge55"}, {"@source": "node55", "@target": "node57", "@id": "edge56", "@about": "#edge56"}, {"@source": "node57", "@target": "node58", "@id": "edge57", "@about": "#edge57"}, {"@source": "node57", "@target": "node59", "@id": "edge58", "@about": "#edge58"}, {"@source": "node59", "@target": "node60", "@id": "edge59", "@about": "#edge59"}, {"@source": "node59", "@target": "node61", "@id": "edge60", "@about": "#edge60"}, {"@source": "node9", "@target": "node10", "@id": "edge9", "@about": "#edge9"}, {"@source": "node10", "@target": "node11", "@id": "edge10", "@about": "#edge10"}, {"@source": "node10", "@target": "node12", "@id": "edge11", "@about": "#edge11"}, {"@source": "node12", "@target": "node13", "@id": "edge12", "@about": "#edge12"}, {"@source": "node12", "@target": "node14", "@id": "edge13", "@about": "#edge13"}, {"@source": "node14", "@target": "node15", "@id": "edge14", "@about": "#edge14"}, {"@source": "node14", "@target": "node16", "@id": "edge15", "@about": "#edge15"}], "@id": "tree1", "@about": "#tree1", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:branchLengthDescription", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:branchLengthMode", "@datatype": "xsd:string", "$": "ot:undefined"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:curatedType", "@datatype": "xsd:string", "$": "Maximum parsimony "}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:inGroupClade", "@datatype": "xsd:string", "$": "node9"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:nodeLabelMode", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:nodeLabelTimeUnit", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:outGroupEdge", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:specifiedRoot", "@datatype": "xsd:string", "$": "node1"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:unrootedTree", "@datatype": "xsd:boolean", "$": false}]}], "@about": "#trees1"}, "meta": [{"agent": [{"@description": "Open Tree NexSON validation", "@id": "peyotl-validator", "@name": "api.opentreeoflife.org/validate", "@url": "https://github.com/OpenTreeOfLife/peyotl", "@version": "0.0.4a", "invocation": {"commandLine": [], "otherProperty": [{"name": "pythonVersion", "value": "3.10.12"}, {"name": "pythonImplementation", "value": "CPython"}]}, "@about": "#peyotl-validator"}, {"@description": "Web-based interface for submitting, editing, and reviewing studies in the Open Tree of Life project.", "@id": "opentree-curation-webapp", "@name": "OpenTree curation webapp", "@url": "https://github.com/OpenTreeOfLife/opentree", "@version": "0.0.0", "@about": "#opentree-curation-webapp"}], "@xsi:type": "nex:LiteralMeta", "@property": "ot:agents"}, {"annotation": [{"@dateCreated": "2025-03-15T01:58:29.837Z", "@description": "Aids for mapping study OTUs to OTT taxa", "@id": "otu-mapping-hints", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "OTU_MAPPING_HINTS", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"autoAcceptExactMatches": true, "searchContext": {"$": "Insects"}, "substitutions": {"substitution": [{"@active": false, "@valid": true, "new": {"$": ""}, "old": {"$": ""}}]}, "useFuzzyMatching": false}, "refersTo": {"@top": {"$": "meta"}}}], "@about": "#otu-mapping-hints"}, {"@dateCreated": "2025-03-15T01:58:29.837Z", "@description": "Describes external namesets merged into this study", "@id": "merged-namesets-metadata", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "MERGED_NAMESET_INFO", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"namesets": {"nameset": []}}, "refersTo": {"@top": {"$": "meta"}}}], "@about": "#merged-namesets-metadata"}, {"@dateCreated": "2025-03-15T01:58:29.837Z", "@description": "Describes supporting data files for this study", "@id": "supporting-files-metadata", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "SUPPORTING_FILE_INFO", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"@movedToPermanentArchive": false, "files": {"file": [{"@filename": "ForgiePhilips2005Scarabaeini.nwk", "@size": 697, "@type": "newick", "@url": "/curator/download/supporting_files.doc.8b304afd7355636c.466f726769655068696c697073323030355363617261626165696e692e6e776b.nwk", "description": {"$": "Source data for tree(s) 'tree1'"}, "sourceForTree": [{"$": "tree1"}]}, {"@filename": "image.png", "@size": 695, "@type": "", "@url": "/curator/supporting_files/download/supporting_files.doc.9c7aae65786c24e6.696d6167652e706e67.png", "description": {"$": ""}, "sourceForTree": []}, {"@filename": "image.png", "@size": 872, "@type": "", "@url": "/curator/supporting_files/download/supporting_files.doc.b81d266569bac441.696d6167652e706e67.png", "description": {"$": ""}, "sourceForTree": []}, {"@filename": "image.png", "@size": 2150, "@type": "", "@url": "/curator/supporting_files/download/supporting_files.doc.8b5b43a81cf01927.696d6167652e706e67.png", "description": {"$": ""}, "sourceForTree": []}, {"@filename": "image.png", "@size": 2297, "@type": "", "@url": "/curator/supporting_files/download/supporting_files.doc.bbe8a9b04295493c.696d6167652e706e67.png", "description": {"$": ""}, "sourceForTree": []}, {"@filename": "image.png", "@size": 3431, "@type": "", "@url": "/curator/supporting_files/download/supporting_files.doc.918a8ae3ffdaa65e.696d6167652e706e67.png", "description": {"$": ""}, "sourceForTree": []}]}}, "refersTo": {"@top": {"$": "meta"}}}], "@about": "#supporting-files-metadata"}, {"@id": "peyotl-validator-event", "@description": "Open Tree NexSON validation", "@wasAssociatedWithAgentId": "peyotl-validator", "@passedChecks": true, "@preserve": false, "message": [{"@code": "MULTIPLE_TIPS_MAPPED_TO_OTT_ID", "data": ["otu11", "otu12", "otu21", "otu22"], "refersTo": {"@top": "otus", "@idref": "otus1", "@otusID": "otus1"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:comment"], "refersTo": {"@top": "nexml", "@idref": "study"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["highestMintedElementIDs"], "refersTo": {"@top": "nexml", "@idref": "study"}, "@severity": "WARNING"}, {"@code": "MISSING_OPTIONAL_KEY", "data": ["^ot:branchLengthTimeUnit"], "refersTo": {"@top": "trees", "@idref": "tree1", "@treesID": "trees1", "@treeID": "tree1"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:nodeLabelMode", "^ot:nodeLabelTimeUnit", "^ot:reasonsToExcludeFromSynthesis"], "refersTo": {"@top": "trees", "@idref": "tree1", "@treesID": "trees1", "@treeID": "tree1"}, "@severity": "WARNING"}, {"@code": "MISSING_OPTIONAL_KEY", "data": ["^ot:ottId"], "refersTo": {"@top": "otus", "@idref": ["otu11", "otu12", "otu21", "otu22"], "@otusID": "otus1", "@otuID": ["otu11", "otu12", "otu21", "otu22"]}, "@severity": "WARNING"}], "@about": "#peyotl-validator-event"}], "@xsi:type": "nex:LiteralMeta", "@property": "ot:annotationEvents"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:comment", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:curatorName", "@datatype": "xsd:string", "$": "dchesters"}, {"@href": "", "@xsi:type": "nex:ResourceMeta", "@rel": "ot:dataDeposit"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:focalClade", "@datatype": "xsd:int", "$": 405599}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:focalCladeOTTTaxonName", "@datatype": "xsd:string", "$": "Scarabaeini"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:studyId", "@datatype": "xsd:string", "$": "ot_2692"}, {"@href": "https://doi.org/10.1111/j.1365-3113.2004.00273.x", "@xsi:type": "nex:ResourceMeta", "@rel": "ot:studyPublication"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:studyPublicationReference", "@datatype": "xsd:string", "$": "Forgie, S. A., Philips, T. K., & Scholtz, C. H. (2004). Evolution of the Scarabaeini (Scarabaeidae: Scarabaeinae). Systematic Entomology, 30(1), 60\u201396. Portico. https://doi.org/10.1111/j.1365-3113.2004.00273.x\n"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:studyYear", "@datatype": "xsd:int", "$": 2005}]}}, "branch2sha": {"master": "c33806c9ee11db205ee8c02a42e31b1c3128e299"}, "commentHTML": "", "duplicateStudyIDs": [], "shardName": "phylesystem-1", "versionHistory": [{"id": "fc6e83e6a30f759b4917dadeb405219a4d160cde", "author_name": "dchesters", "author_email": "dc0357548934@live.co.uk", "date": "Sat, 15 Mar 2025 02:01:16 +0000", "date_ISO_8601": "2025-03-15 02:01:16 +0000", "relative_date": "1 year, 1 month ago", "message_subject": "Initial commit Forgie, Philips, Scholtz (2005)", "message_body": "ForgiePhilips2005Scarabaeini.nwk\nAuthors appear to prefer result ommiting flight characters. Assumed all terminals abbreviated S. are Scarabaeus.\n\n(Update document 'ot_2692' via OpenTree API)"}, {"id": "ce0e40665f93b3d177836c541cd82f26350c54da", "author_name": "dchesters", "author_email": "dc0357548934@live.co.uk", "date": "Sat, 15 Mar 2025 01:58:20 +0000", "date_ISO_8601": "2025-03-15 01:58:20 +0000", "relative_date": "1 year, 1 month ago", "message_subject": "Update document 'ot_2692' via OpenTree API"}]}