{"sha": "c33806c9ee11db205ee8c02a42e31b1c3128e299", "data": {"nexml": {"@about": "#study", "@generator": "Open Tree API", "@id": "study", "@nexml2json": "1.2.1", "@nexmljson": "http://purl.org/opentree/nexson", "@version": "0.9", "@xmlns": {"$": "http://www.nexml.org/2009", "nex": "http://www.nexml.org/2009", "ot": "http://purl.org/opentree-terms#", "xhtml": "http://www.w3.org/1999/xhtml/vocab#", "xsd": "http://www.w3.org/2001/XMLSchema#", "xsi": "http://www.w3.org/2001/XMLSchema-instance"}, "^ot:agents": {"agent": [{"@description": "Open Tree NexSON validation", "@id": "peyotl-validator", "@name": "api.opentreeoflife.org/validate", "@url": "https://github.com/OpenTreeOfLife/peyotl", "@version": "0.0.4a", "invocation": {"commandLine": [], "otherProperty": [{"name": "pythonVersion", "value": "3.10.12"}, {"name": "pythonImplementation", "value": "CPython"}]}}, {"@description": "Web-based interface for submitting, editing, and reviewing studies in the Open Tree of Life project.", "@id": "opentree-curation-webapp", "@name": "OpenTree curation webapp", "@url": "https://github.com/OpenTreeOfLife/opentree", "@version": "0.0.0"}]}, "^ot:annotationEvents": {"annotation": [{"@dateCreated": "2025-03-17T10:17:19.819Z", "@description": "Aids for mapping study OTUs to OTT taxa", "@id": "otu-mapping-hints", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "OTU_MAPPING_HINTS", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"autoAcceptExactMatches": true, "searchContext": {"$": "Insects"}, "substitutions": {"substitution": [{"@active": false, "@valid": true, "new": {"$": ""}, "old": {"$": ""}}]}, "useFuzzyMatching": false}, "refersTo": {"@top": {"$": "meta"}}}]}, {"@dateCreated": "2025-03-17T10:17:19.819Z", "@description": "Describes external namesets merged into this study", "@id": "merged-namesets-metadata", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "MERGED_NAMESET_INFO", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"namesets": {"nameset": []}}, "refersTo": {"@top": {"$": "meta"}}}]}, {"@dateCreated": "2025-03-17T10:17:19.819Z", "@description": "Describes supporting data files for this study", "@id": "supporting-files-metadata", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "SUPPORTING_FILE_INFO", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"@movedToPermanentArchive": false, "files": {"file": [{"@filename": "FreitasBrown2004.nwk", "@size": 1806, "@type": "newick", "@url": "/curator/download/supporting_files.doc.86a81112cbe90399.4672656974617342726f776e323030342e6e776b.nwk", "description": {"$": "Source data for tree(s) 'tree1'"}, "sourceForTree": [{"$": "tree1"}]}, {"@filename": "image.png", "@size": 707, "@type": "", "@url": "/curator/supporting_files/download/supporting_files.doc.abd1e13a8ed548ed.696d6167652e706e67.png", "description": {"$": ""}, "sourceForTree": []}, {"@filename": "image.png", "@size": 1083, "@type": "", "@url": "/curator/supporting_files/download/supporting_files.doc.b684d3c24dd935ed.696d6167652e706e67.png", "description": {"$": ""}, "sourceForTree": []}, {"@filename": "image.png", "@size": 1785, "@type": "", "@url": "/curator/supporting_files/download/supporting_files.doc.b3006e68c13e773f.696d6167652e706e67.png", "description": {"$": ""}, "sourceForTree": []}, {"@filename": "image.png", "@size": 1785, "@type": "", "@url": "/curator/supporting_files/download/supporting_files.doc.ad4b5703d331a448.696d6167652e706e67.png", "description": {"$": ""}, "sourceForTree": []}, {"@filename": "image.png", "@size": 4729, "@type": "", "@url": "/curator/supporting_files/download/supporting_files.doc.bb37274f050b156b.696d6167652e706e67.png", "description": {"$": ""}, "sourceForTree": []}]}}, "refersTo": {"@top": {"$": "meta"}}}]}, {"@id": "peyotl-validator-event", "@description": "Open Tree NexSON validation", "@wasAssociatedWithAgentId": "peyotl-validator", "@passedChecks": true, "@preserve": false, "message": [{"@code": "MULTIPLE_TIPS_MAPPED_TO_OTT_ID", "data": ["otu27", "otu69", "otu73", "otu76", "otu78", "otu84", "otu95"], "refersTo": {"@top": "otus", "@idref": "otus1", "@otusID": "otus1"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:comment"], "refersTo": {"@top": "nexml", "@idref": "study"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["highestMintedElementIDs"], "refersTo": {"@top": "nexml", "@idref": "study"}, "@severity": "WARNING"}, {"@code": "MISSING_OPTIONAL_KEY", "data": ["^ot:branchLengthTimeUnit"], "refersTo": {"@top": "trees", "@idref": "tree1", "@treesID": "trees1", "@treeID": "tree1"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:nodeLabelMode", "^ot:nodeLabelTimeUnit", "^ot:reasonsToExcludeFromSynthesis"], "refersTo": {"@top": "trees", "@idref": "tree1", "@treesID": "trees1", "@treeID": "tree1"}, "@severity": "WARNING"}, {"@code": "MISSING_OPTIONAL_KEY", "data": ["^ot:ottId"], "refersTo": {"@top": "otus", "@idref": ["otu27", "otu69", "otu73", "otu76", "otu78", "otu84", "otu95"], "@otusID": "otus1", "@otuID": ["otu27", "otu69", "otu73", "otu76", "otu78", "otu84", "otu95"]}, "@severity": "WARNING"}]}]}, "^ot:candidateTreeForSynthesis": [], "^ot:comment": "", "^ot:curatorName": ["dchesters"], "^ot:dataDeposit": {"@href": ""}, "^ot:focalClade": 358161, "^ot:focalCladeOTTTaxonName": "Nymphalidae", "^ot:otusElementOrder": ["otus1"], "^ot:studyId": "ot_2702", "^ot:studyPublication": {"@href": "https://doi.org/10.1080/10635150490445670"}, "^ot:studyPublicationReference": "Freitas, A. V. L., & Brown, K. S. (2004). Phylogeny of the Nymphalidae (Lepidoptera). Systematic Biology, 53(3), 363\u2013383. https://doi.org/10.1080/10635150490445670\n", "^ot:studyYear": 2004, "^ot:tag": [], "^ot:treesElementOrder": ["trees1"], "highestMintedElementIDs": {"agent": 0, "annotation": 0, "edge": 188, "message": 0, "node": 189, "otu": 95, "otus": 2, "tree": 1, "trees": 2}, "otusById": {"otus1": {"otuById": {"otu1": {"^ot:originalLabel": "Libytheana carinenta", "^ot:ottId": 719269, "^ot:ottTaxonName": "Libytheana carinenta"}, "otu10": {"^ot:originalLabel": "Mechanitis lysimnia", "^ot:ottId": 192886, "^ot:ottTaxonName": "Mechanitis lysimnia"}, "otu11": {"^ot:originalLabel": "Hypothyris ninonia", "^ot:ottId": 706307, "^ot:ottTaxonName": "Hypothyris ninonia"}, "otu12": {"^ot:originalLabel": "Ithomia drymo", "^ot:ottId": 936736, "^ot:ottTaxonName": "Ithomia drymo"}, "otu13": {"^ot:originalLabel": "Heterosais edessa", "^ot:ottId": 3119019, "^ot:ottTaxonName": "Heterosais edessa"}, "otu14": {"^ot:originalLabel": "Dircenna dero", "^ot:ottId": 1007782, "^ot:ottTaxonName": "Dircenna dero"}, "otu15": {"^ot:originalLabel": "Hypanartia lethe", "^ot:ottId": 382516, "^ot:ottTaxonName": "Hypanartia lethe"}, "otu16": {"^ot:originalLabel": "Vanessa myrinna", "^ot:ottId": 253017, "^ot:ottTaxonName": "Vanessa myrinna"}, "otu17": {"^ot:originalLabel": "Anartia amathea", "^ot:ottId": 193816, "^ot:ottTaxonName": "Anartia amathea"}, "otu18": {"^ot:originalLabel": "Junonia evarete", "^ot:ottId": 636538, "^ot:ottTaxonName": "Junonia evarete"}, "otu19": {"^ot:originalLabel": "Siproeta stelenes", "^ot:ottId": 634339, "^ot:ottTaxonName": "Siproeta stelenes"}, "otu2": {"^ot:originalLabel": "Danaus plexippus", "^ot:ottId": 190091, "^ot:ottTaxonName": "Danaus plexippus"}, "otu20": {"^ot:originalLabel": "Chlosyne lacinia", "^ot:ottId": 513026, "^ot:ottTaxonName": "Chlosyne lacinia"}, "otu21": {"^ot:originalLabel": "Eresia lansdorfi", "^ot:ottId": 458432, "^ot:ottTaxonName": "Eresia lansdorfi"}, "otu22": {"^ot:originalLabel": "Tegosa claudina", "^ot:ottId": 591049, "^ot:ottTaxonName": "Tegosa claudina"}, "otu23": {"^ot:originalLabel": "Pardopsis punctatissima", "^ot:ottId": 353035, "^ot:ottTaxonName": "Pardopsis punctatissima"}, "otu24": {"^ot:originalLabel": "Acraea encedon", "^ot:ottId": 776553, "^ot:ottTaxonName": "Acraea encedon"}, "otu25": {"^ot:originalLabel": "Bematistes aganice", "^ot:ottId": 3112574, "^ot:ottTaxonName": "Bematistes aganice"}, "otu26": {"^ot:originalLabel": "Actinote pellenea", "^ot:ottId": 79547, "^ot:ottTaxonName": "Actinote pellenea"}, "otu27": {"^ot:originalLabel": "Phalanta phalanta"}, "otu28": {"^ot:originalLabel": "Argynnis paphia", "^ot:ottId": 969449, "^ot:ottTaxonName": "Argynnis paphia"}, "otu29": {"^ot:originalLabel": "Euptoieta hegesia", "^ot:ottId": 691599, "^ot:ottTaxonName": "Euptoieta hegesia"}, "otu3": {"^ot:originalLabel": "Amauris niavius", "^ot:ottId": 913375, "^ot:ottTaxonName": "Amauris niavius"}, "otu30": {"^ot:originalLabel": "Cethosia hypsea", "^ot:ottId": 1028344, "^ot:ottTaxonName": "Cethosia hypsea"}, "otu31": {"^ot:originalLabel": "Vindula erota", "^ot:ottId": 79186, "^ot:ottTaxonName": "Vindula erota"}, "otu32": {"^ot:originalLabel": "Dione juno", "^ot:ottId": 1085183, "^ot:ottTaxonName": "Dione juno"}, "otu33": {"^ot:originalLabel": "Agraulis vanillae", "^ot:ottId": 81495, "^ot:ottTaxonName": "Agraulis vanillae"}, "otu34": {"^ot:originalLabel": "Dryas iulia", "^ot:ottId": 458065, "^ot:ottTaxonName": "Dryas iulia"}, "otu35": {"^ot:originalLabel": "Philaethria wernickei", "^ot:ottId": 125884, "^ot:ottTaxonName": "Philaethria wernickei"}, "otu36": {"^ot:originalLabel": "Dryadula phaetusa", "^ot:ottId": 896449, "^ot:ottTaxonName": "Dryadula phaetusa"}, "otu37": {"^ot:originalLabel": "Heliconius erato", "^ot:ottId": 407981, "^ot:ottTaxonName": "Heliconius erato"}, "otu38": {"^ot:originalLabel": "Eueides isabella", "^ot:ottId": 1034607, "^ot:ottTaxonName": "Eueides isabella"}, "otu39": {"^ot:originalLabel": "Colobura dirce", "^ot:ottId": 977975, "^ot:ottTaxonName": "Colobura dirce"}, "otu4": {"^ot:originalLabel": "Lycorea cleobaea", "^ot:ottId": 647556, "^ot:ottTaxonName": "Lycorea halia"}, "otu40": {"^ot:originalLabel": "Smyrna blomfildia", "^ot:ottId": 105881, "^ot:ottTaxonName": "Smyrna blomfildia"}, "otu41": {"^ot:originalLabel": "Historis odius", "^ot:ottId": 1083316, "^ot:ottTaxonName": "Historis odius"}, "otu42": {"^ot:originalLabel": "Marpesia petreus", "^ot:ottId": 454142, "^ot:ottTaxonName": "Marpesia petreus"}, "otu43": {"^ot:originalLabel": "Cyrestis thyodamas", "^ot:ottId": 265145, "^ot:ottTaxonName": "Cyrestis thyodamas"}, "otu44": {"^ot:originalLabel": "Hamanumida daedalus", "^ot:ottId": 586207, "^ot:ottTaxonName": "Hamanumida daedalus"}, "otu45": {"^ot:originalLabel": "Adelpha syma", "^ot:ottId": 7151736, "^ot:ottTaxonName": "Adelpha syma"}, "otu46": {"^ot:originalLabel": "Neptis laeta", "^ot:ottId": 3122089, "^ot:ottTaxonName": "Neptis laeta"}, "otu47": {"^ot:originalLabel": "Dynamine mylitta", "^ot:ottId": 471180, "^ot:ottTaxonName": "Dynamine postverta"}, "otu48": {"^ot:originalLabel": "Cybdelis phaesyla", "^ot:ottId": 5854969, "^ot:ottTaxonName": "Cybdelis phaesyla"}, "otu49": {"^ot:originalLabel": "Eurytela dryope", "^ot:ottId": 839793, "^ot:ottTaxonName": "Eurytela dryope"}, "otu5": {"^ot:originalLabel": "Anetia briarea", "^ot:ottId": 856190, "^ot:ottTaxonName": "Anetia briarea"}, "otu50": {"^ot:originalLabel": "Mestra hypermestra", "^ot:ottId": 620779, "^ot:ottTaxonName": "Mestra dorcas hypermestra"}, "otu51": {"^ot:originalLabel": "Biblis hyperia", "^ot:ottId": 1028342, "^ot:ottTaxonName": "Biblis hyperia"}, "otu52": {"^ot:originalLabel": "Eunica bechina", "^ot:ottId": 3116523, "^ot:ottTaxonName": "Eunica bechina"}, "otu53": {"^ot:originalLabel": "Sallya natalensis", "^ot:ottId": 3124921, "^ot:ottTaxonName": "Sallya natalensis"}, "otu54": {"^ot:originalLabel": "Hamadryas epinome", "^ot:ottId": 3116359, "^ot:ottTaxonName": "Hamadryas epinome"}, "otu55": {"^ot:originalLabel": "Ectima thecla", "^ot:ottId": 673455, "^ot:ottTaxonName": "Ectima thecla"}, "otu56": {"^ot:originalLabel": "Epiphile orea", "^ot:ottId": 673457, "^ot:ottTaxonName": "Epiphile orea"}, "otu57": {"^ot:originalLabel": "Callicore sorana", "^ot:ottId": 5559339, "^ot:ottTaxonName": "Callicore sorana"}, "otu58": {"^ot:originalLabel": "Callicore hydaspes", "^ot:ottId": 5559338, "^ot:ottTaxonName": "Callicore hydaspes"}, "otu59": {"^ot:originalLabel": "Diaethria clymena", "^ot:ottId": 634333, "^ot:ottTaxonName": "Diaethria clymena"}, "otu6": {"^ot:originalLabel": "Tellervo zoilus", "^ot:ottId": 380729, "^ot:ottTaxonName": "Tellervo zoilus"}, "otu60": {"^ot:originalLabel": "Pyrrhogyra ophni", "^ot:ottId": 3116270, "^ot:ottTaxonName": "Pyrrhogyra ophni"}, "otu61": {"^ot:originalLabel": "Catonephele numilia", "^ot:ottId": 283884, "^ot:ottTaxonName": "Catonephele numilia"}, "otu62": {"^ot:originalLabel": "Myscelia orsis", "^ot:ottId": 3116589, "^ot:ottTaxonName": "Myscelia orsis"}, "otu63": {"^ot:originalLabel": "Temenis laothoe", "^ot:ottId": 1079091, "^ot:ottTaxonName": "Temenis laothoe"}, "otu64": {"^ot:originalLabel": "Nica flavilla", "^ot:ottId": 788135, "^ot:ottTaxonName": "Nica flavilla"}, "otu65": {"^ot:originalLabel": "Doxocopa agathina", "^ot:ottId": 3119620, "^ot:ottTaxonName": "Doxocopa agathina"}, "otu66": {"^ot:originalLabel": "Asterocampa argus", "^ot:ottId": 169998, "^ot:ottTaxonName": "Asterocampa idyja argus"}, "otu67": {"^ot:originalLabel": "Calinaga buddha", "^ot:ottId": 807508, "^ot:ottTaxonName": "Calinaga buddha"}, "otu68": {"^ot:originalLabel": "Charaxes varanes", "^ot:ottId": 217575, "^ot:ottTaxonName": "Charaxes varanes"}, "otu69": {"^ot:originalLabel": "Prepona sp"}, "otu7": {"^ot:originalLabel": "Tithorea harmonia", "^ot:ottId": 331338, "^ot:ottTaxonName": "Tithorea harmonia"}, "otu70": {"^ot:originalLabel": "Zaretis itys", "^ot:ottId": 1079095, "^ot:ottTaxonName": "Zaretis itys"}, "otu71": {"^ot:originalLabel": "Siderone marthesia", "^ot:ottId": 365205, "^ot:ottTaxonName": "Siderone galanthis galanthis"}, "otu72": {"^ot:originalLabel": "Hypna clytemnestra", "^ot:ottId": 552641, "^ot:ottTaxonName": "Hypna clytemnestra"}, "otu73": {"^ot:originalLabel": "Memphis ryphea"}, "otu74": {"^ot:originalLabel": "Consul fabius", "^ot:ottId": 315427, "^ot:ottTaxonName": "Consul fabius"}, "otu75": {"^ot:originalLabel": "Melanitis leda", "^ot:ottId": 31511, "^ot:ottTaxonName": "Melanitis leda"}, "otu76": {"^ot:originalLabel": "Haetera diaphana"}, "otu77": {"^ot:originalLabel": "Pierella lamia", "^ot:ottId": 739670, "^ot:ottTaxonName": "Pierella lamia"}, "otu78": {"^ot:originalLabel": "Penthema formosana"}, "otu79": {"^ot:originalLabel": "Eteona tisiphone", "^ot:ottId": 287795, "^ot:ottTaxonName": "Eteona tisiphone"}, "otu8": {"^ot:originalLabel": "Melinaea ludovica", "^ot:ottId": 667439, "^ot:ottTaxonName": "Melinaea ludovica"}, "otu80": {"^ot:originalLabel": "Godartiana muscosa", "^ot:ottId": 135623, "^ot:ottTaxonName": "Godartiana muscosa"}, "otu81": {"^ot:originalLabel": "Parapedaliodes parepa", "^ot:ottId": 215923, "^ot:ottTaxonName": "Parapedaliodes parepa"}, "otu82": {"^ot:originalLabel": "Taygetis laches", "^ot:ottId": 449881, "^ot:ottTaxonName": "Taygetis laches"}, "otu83": {"^ot:originalLabel": "Paryphthimoides phronius", "^ot:ottId": 259490, "^ot:ottTaxonName": "Cissia phronius"}, "otu84": {"^ot:originalLabel": "Pareuptychia interjecta"}, "otu85": {"^ot:originalLabel": "Taenaris onolaus", "^ot:ottId": 3109092, "^ot:ottTaxonName": "Taenaris onolaus"}, "otu86": {"^ot:originalLabel": "Morpho achilles", "^ot:ottId": 5828, "^ot:ottTaxonName": "Morpho achilles"}, "otu87": {"^ot:originalLabel": "Antirrhea archaea", "^ot:ottId": 3109712, "^ot:ottTaxonName": "Antirrhea archaea"}, "otu88": {"^ot:originalLabel": "Caerois chorinaeus", "^ot:ottId": 401863, "^ot:ottTaxonName": "Caerois chorinaeus"}, "otu89": {"^ot:originalLabel": "Bia actorion", "^ot:ottId": 451938, "^ot:ottTaxonName": "Bia actorion"}, "otu9": {"^ot:originalLabel": "Methona themisto", "^ot:ottId": 371889, "^ot:ottTaxonName": "Methona themisto"}, "otu90": {"^ot:originalLabel": "Brassolis sophorae", "^ot:ottId": 315445, "^ot:ottTaxonName": "Brassolis sophorae"}, "otu91": {"^ot:originalLabel": "Dynastor darius", "^ot:ottId": 148256, "^ot:ottTaxonName": "Dynastor darius"}, "otu92": {"^ot:originalLabel": "Dasyophthalma creusa", "^ot:ottId": 315425, "^ot:ottTaxonName": "Dasyophthalma creusa"}, "otu93": {"^ot:originalLabel": "Opsiphanes invirae", "^ot:ottId": 1056460, "^ot:ottTaxonName": "Opsiphanes invirae"}, "otu94": {"^ot:originalLabel": "Caligo beltrao", "^ot:ottId": 3103928, "^ot:ottTaxonName": "Caligo beltrao"}, "otu95": {"^ot:originalLabel": "Eryphanis reevesi"}}}}, "treesById": {"trees1": {"@otus": "otus1", "^ot:treeElementOrder": ["tree1"], "treeById": {"tree1": {"@label": "Fig. 2, MP", "@xsi:type": "nex:FloatTree", "^ot:branchLengthDescription": "", "^ot:branchLengthMode": "ot:undefined", "^ot:curatedType": "Maximum parsimony ", "^ot:inGroupClade": "node3", "^ot:nodeLabelMode": "", "^ot:nodeLabelTimeUnit": "", "^ot:outGroupEdge": "", "^ot:reasonsToExcludeFromSynthesis": [], "^ot:rootNodeId": "node1", "^ot:specifiedRoot": "node1", "^ot:tag": [], "^ot:unrootedTree": false, "edgeBySourceId": {"node1": {"edge1": {"@source": "node1", "@target": "node2"}, "edge2": {"@source": "node1", "@target": "node3"}}, "node101": {"edge101": {"@source": "node101", "@target": "node102"}, "edge102": {"@source": "node101", "@target": "node103"}}, "node104": {"edge104": {"@source": "node104", "@target": "node105"}, "edge111": {"@source": "node104", "@target": "node112"}}, "node105": {"edge105": {"@source": "node105", "@target": "node106"}, "edge108": {"@source": "node105", "@target": "node109"}}, "node106": {"edge106": {"@source": "node106", "@target": "node107"}, "edge107": {"@source": "node106", "@target": "node108"}}, "node109": {"edge109": {"@source": "node109", "@target": "node110"}, "edge110": {"@source": "node109", "@target": "node111"}}, "node112": {"edge112": {"@source": "node112", "@target": "node113"}, "edge119": {"@source": "node112", "@target": "node120"}}, "node113": {"edge113": {"@source": "node113", "@target": "node114"}, "edge114": {"@source": "node113", "@target": "node115"}}, "node115": {"edge115": {"@source": "node115", "@target": "node116"}, "edge116": {"@source": "node115", "@target": "node117"}}, "node117": {"edge117": {"@source": "node117", "@target": "node118"}, "edge118": {"@source": "node117", "@target": "node119"}}, "node12": {"edge12": {"@source": "node12", "@target": "node13"}, "edge13": {"@source": "node12", "@target": "node14"}}, "node120": {"edge120": {"@source": "node120", "@target": "node121"}, "edge121": {"@source": "node120", "@target": "node122"}}, "node122": {"edge122": {"@source": "node122", "@target": "node123"}, "edge125": {"@source": "node122", "@target": "node126"}}, "node123": {"edge123": {"@source": "node123", "@target": "node124"}, "edge124": {"@source": "node123", "@target": "node125"}}, "node126": {"edge126": {"@source": "node126", "@target": "node127"}, "edge127": {"@source": "node126", "@target": "node128"}}, "node129": {"edge129": {"@source": "node129", "@target": "node130"}, "edge132": {"@source": "node129", "@target": "node133"}}, "node130": {"edge130": {"@source": "node130", "@target": "node131"}, "edge131": {"@source": "node130", "@target": "node132"}}, "node133": {"edge133": {"@source": "node133", "@target": "node134"}, "edge134": {"@source": "node133", "@target": "node135"}}, "node135": {"edge135": {"@source": "node135", "@target": "node136"}, "edge148": {"@source": "node135", "@target": "node149"}}, "node136": {"edge136": {"@source": "node136", "@target": "node137"}, "edge137": {"@source": "node136", "@target": "node138"}}, "node138": {"edge138": {"@source": "node138", "@target": "node139"}, "edge139": {"@source": "node138", "@target": "node140"}}, "node14": {"edge14": {"@source": "node14", "@target": "node15"}, "edge15": {"@source": "node14", "@target": "node16"}}, "node140": {"edge140": {"@source": "node140", "@target": "node141"}, "edge143": {"@source": "node140", "@target": "node144"}}, "node141": {"edge141": {"@source": "node141", "@target": "node142"}, "edge142": {"@source": "node141", "@target": "node143"}}, "node144": {"edge144": {"@source": "node144", "@target": "node145"}, "edge145": {"@source": "node144", "@target": "node146"}}, "node146": {"edge146": {"@source": "node146", "@target": "node147"}, "edge147": {"@source": "node146", "@target": "node148"}}, "node149": {"edge149": {"@source": "node149", "@target": "node150"}, "edge168": {"@source": "node149", "@target": "node169"}}, "node150": {"edge150": {"@source": "node150", "@target": "node151"}, "edge151": {"@source": "node150", "@target": "node152"}}, "node152": {"edge152": {"@source": "node152", "@target": "node153"}, "edge155": {"@source": "node152", "@target": "node156"}}, "node153": {"edge153": {"@source": "node153", "@target": "node154"}, "edge154": {"@source": "node153", "@target": "node155"}}, "node156": {"edge156": {"@source": "node156", "@target": "node157"}, "edge159": {"@source": "node156", "@target": "node160"}}, "node157": {"edge157": {"@source": "node157", "@target": "node158"}, "edge158": {"@source": "node157", "@target": "node159"}}, "node16": {"edge16": {"@source": "node16", "@target": "node17"}, "edge17": {"@source": "node16", "@target": "node18"}}, "node160": {"edge160": {"@source": "node160", "@target": "node161"}, "edge161": {"@source": "node160", "@target": "node162"}}, "node162": {"edge162": {"@source": "node162", "@target": "node163"}, "edge165": {"@source": "node162", "@target": "node166"}}, "node163": {"edge163": {"@source": "node163", "@target": "node164"}, "edge164": {"@source": "node163", "@target": "node165"}}, "node166": {"edge166": {"@source": "node166", "@target": "node167"}, "edge167": {"@source": "node166", "@target": "node168"}}, "node169": {"edge169": {"@source": "node169", "@target": "node170"}, "edge176": {"@source": "node169", "@target": "node177"}}, "node170": {"edge170": {"@source": "node170", "@target": "node171"}, "edge171": {"@source": "node170", "@target": "node172"}}, "node172": {"edge172": {"@source": "node172", "@target": "node173"}, "edge173": {"@source": "node172", "@target": "node174"}}, "node174": {"edge174": {"@source": "node174", "@target": "node175"}, "edge175": {"@source": "node174", "@target": "node176"}}, "node177": {"edge177": {"@source": "node177", "@target": "node178"}, "edge178": {"@source": "node177", "@target": "node179"}}, "node179": {"edge179": {"@source": "node179", "@target": "node180"}, "edge180": {"@source": "node179", "@target": "node181"}}, "node18": {"edge18": {"@source": "node18", "@target": "node19"}, "edge19": {"@source": "node18", "@target": "node20"}}, "node181": {"edge181": {"@source": "node181", "@target": "node182"}, "edge182": {"@source": "node181", "@target": "node183"}}, "node183": {"edge183": {"@source": "node183", "@target": "node184"}, "edge184": {"@source": "node183", "@target": "node185"}}, "node185": {"edge185": {"@source": "node185", "@target": "node186"}, "edge186": {"@source": "node185", "@target": "node187"}}, "node187": {"edge187": {"@source": "node187", "@target": "node188"}, "edge188": {"@source": "node187", "@target": "node189"}}, "node20": {"edge20": {"@source": "node20", "@target": "node21"}, "edge21": {"@source": "node20", "@target": "node22"}}, "node22": {"edge22": {"@source": "node22", "@target": "node23"}, "edge25": {"@source": "node22", "@target": "node26"}}, "node23": {"edge23": {"@source": "node23", "@target": "node24"}, "edge24": {"@source": "node23", "@target": "node25"}}, "node26": {"edge26": {"@source": "node26", "@target": "node27"}, "edge27": {"@source": "node26", "@target": "node28"}}, "node29": {"edge29": {"@source": "node29", "@target": "node30"}, "edge76": {"@source": "node29", "@target": "node77"}}, "node3": {"edge28": {"@source": "node3", "@target": "node29"}, "edge3": {"@source": "node3", "@target": "node4"}}, "node30": {"edge30": {"@source": "node30", "@target": "node31"}, "edge45": {"@source": "node30", "@target": "node46"}}, "node31": {"edge31": {"@source": "node31", "@target": "node32"}, "edge34": {"@source": "node31", "@target": "node35"}}, "node32": {"edge32": {"@source": "node32", "@target": "node33"}, "edge33": {"@source": "node32", "@target": "node34"}}, "node35": {"edge35": {"@source": "node35", "@target": "node36"}, "edge36": {"@source": "node35", "@target": "node37"}}, "node37": {"edge37": {"@source": "node37", "@target": "node38"}, "edge40": {"@source": "node37", "@target": "node41"}}, "node38": {"edge38": {"@source": "node38", "@target": "node39"}, "edge39": {"@source": "node38", "@target": "node40"}}, "node4": {"edge11": {"@source": "node4", "@target": "node12"}, "edge4": {"@source": "node4", "@target": "node5"}}, "node41": {"edge41": {"@source": "node41", "@target": "node42"}, "edge42": {"@source": "node41", "@target": "node43"}}, "node43": {"edge43": {"@source": "node43", "@target": "node44"}, "edge44": {"@source": "node43", "@target": "node45"}}, "node46": {"edge46": {"@source": "node46", "@target": "node47"}, "edge53": {"@source": "node46", "@target": "node54"}}, "node47": {"edge47": {"@source": "node47", "@target": "node48"}, "edge48": {"@source": "node47", "@target": "node49"}}, "node49": {"edge49": {"@source": "node49", "@target": "node50"}, "edge50": {"@source": "node49", "@target": "node51"}}, "node5": {"edge5": {"@source": "node5", "@target": "node6"}, "edge8": {"@source": "node5", "@target": "node9"}}, "node51": {"edge51": {"@source": "node51", "@target": "node52"}, "edge52": {"@source": "node51", "@target": "node53"}}, "node54": {"edge54": {"@source": "node54", "@target": "node55"}, "edge59": {"@source": "node54", "@target": "node60"}}, "node55": {"edge55": {"@source": "node55", "@target": "node56"}, "edge56": {"@source": "node55", "@target": "node57"}}, "node57": {"edge57": {"@source": "node57", "@target": "node58"}, "edge58": {"@source": "node57", "@target": "node59"}}, "node6": {"edge6": {"@source": "node6", "@target": "node7"}, "edge7": {"@source": "node6", "@target": "node8"}}, "node60": {"edge60": {"@source": "node60", "@target": "node61"}, "edge63": {"@source": "node60", "@target": "node64"}}, "node61": {"edge61": {"@source": "node61", "@target": "node62"}, "edge62": {"@source": "node61", "@target": "node63"}}, "node64": {"edge64": {"@source": "node64", "@target": "node65"}, "edge65": {"@source": "node64", "@target": "node66"}}, "node66": {"edge66": {"@source": "node66", "@target": "node67"}, "edge67": {"@source": "node66", "@target": "node68"}}, "node68": {"edge68": {"@source": "node68", "@target": "node69"}, "edge69": {"@source": "node68", "@target": "node70"}}, "node70": {"edge70": {"@source": "node70", "@target": "node71"}, "edge71": {"@source": "node70", "@target": "node72"}}, "node72": {"edge72": {"@source": "node72", "@target": "node73"}, "edge73": {"@source": "node72", "@target": "node74"}}, "node74": {"edge74": {"@source": "node74", "@target": "node75"}, "edge75": {"@source": "node74", "@target": "node76"}}, "node77": {"edge77": {"@source": "node77", "@target": "node78"}, "edge92": {"@source": "node77", "@target": "node93"}}, "node78": {"edge78": {"@source": "node78", "@target": "node79"}, "edge83": {"@source": "node78", "@target": "node84"}}, "node79": {"edge79": {"@source": "node79", "@target": "node80"}, "edge80": {"@source": "node79", "@target": "node81"}}, "node81": {"edge81": {"@source": "node81", "@target": "node82"}, "edge82": {"@source": "node81", "@target": "node83"}}, "node84": {"edge84": {"@source": "node84", "@target": "node85"}, "edge87": {"@source": "node84", "@target": "node88"}}, "node85": {"edge85": {"@source": "node85", "@target": "node86"}, "edge86": {"@source": "node85", "@target": "node87"}}, "node88": {"edge88": {"@source": "node88", "@target": "node89"}, "edge89": {"@source": "node88", "@target": "node90"}}, "node9": {"edge10": {"@source": "node9", "@target": "node11"}, "edge9": {"@source": "node9", "@target": "node10"}}, "node90": {"edge90": {"@source": "node90", "@target": "node91"}, "edge91": {"@source": "node90", "@target": "node92"}}, "node93": {"edge128": {"@source": "node93", "@target": "node129"}, "edge93": {"@source": "node93", "@target": "node94"}}, "node94": {"edge94": {"@source": "node94", "@target": "node95"}, "edge95": {"@source": "node94", "@target": "node96"}}, "node96": {"edge96": {"@source": "node96", "@target": "node97"}, "edge97": {"@source": "node96", "@target": "node98"}}, "node98": {"edge103": {"@source": "node98", "@target": "node104"}, "edge98": {"@source": "node98", "@target": "node99"}}, "node99": {"edge100": {"@source": "node99", "@target": "node101"}, "edge99": {"@source": "node99", "@target": "node100"}}}, "nodeById": {"node1": {"@root": true}, "node10": {"@otu": "otu4"}, "node100": {"@otu": "otu49"}, "node101": {}, "node102": {"@otu": "otu50"}, "node103": {"@otu": "otu51"}, "node104": {}, "node105": {}, "node106": {}, "node107": {"@otu": "otu52"}, "node108": {"@otu": "otu53"}, "node109": {}, "node11": {"@otu": "otu5"}, "node110": {"@otu": "otu54"}, "node111": {"@otu": "otu55"}, "node112": {}, "node113": {}, "node114": {"@otu": "otu56"}, "node115": {}, "node116": {"@otu": "otu57"}, "node117": {}, "node118": {"@otu": "otu58"}, "node119": {"@otu": "otu59"}, "node12": {}, "node120": {}, "node121": {"@otu": "otu60"}, "node122": {}, "node123": {}, "node124": {"@otu": "otu61"}, "node125": {"@otu": "otu62"}, "node126": {}, "node127": {"@otu": "otu63"}, "node128": {"@otu": "otu64"}, "node129": {}, "node13": {"@otu": "otu6"}, "node130": {}, "node131": {"@otu": "otu65"}, "node132": {"@otu": "otu66"}, "node133": {}, "node134": {"@otu": "otu67"}, "node135": {}, "node136": {}, "node137": {"@otu": "otu68"}, "node138": {}, "node139": {"@otu": "otu69"}, "node14": {}, "node140": {}, "node141": {}, "node142": {"@otu": "otu70"}, "node143": {"@otu": "otu71"}, "node144": {}, "node145": {"@otu": "otu72"}, "node146": {}, "node147": {"@otu": "otu73"}, "node148": {"@otu": "otu74"}, "node149": {}, "node15": {"@otu": "otu7"}, "node150": {}, "node151": {"@otu": "otu75"}, "node152": {}, "node153": {}, "node154": {"@otu": "otu76"}, "node155": {"@otu": "otu77"}, "node156": {}, "node157": {}, "node158": {"@otu": "otu78"}, "node159": {"@otu": "otu79"}, "node16": {}, "node160": {}, "node161": {"@otu": "otu80"}, "node162": {}, "node163": {}, "node164": {"@otu": "otu81"}, "node165": {"@otu": "otu82"}, "node166": {}, "node167": {"@otu": "otu83"}, "node168": {"@otu": "otu84"}, "node169": {}, "node17": {"@otu": "otu8"}, "node170": {}, "node171": {"@otu": "otu85"}, "node172": {}, "node173": {"@otu": "otu86"}, "node174": {}, "node175": {"@otu": "otu87"}, "node176": {"@otu": "otu88"}, "node177": {}, "node178": {"@otu": "otu89"}, "node179": {}, "node18": {}, "node180": {"@otu": "otu90"}, "node181": {}, "node182": {"@otu": "otu91"}, "node183": {}, "node184": {"@otu": "otu92"}, "node185": {}, "node186": {"@otu": "otu93"}, "node187": {}, "node188": {"@otu": "otu94"}, "node189": {"@otu": "otu95"}, "node19": {"@otu": "otu9"}, "node2": {"@otu": "otu1"}, "node20": {}, "node21": {"@otu": "otu10"}, "node22": {}, "node23": {}, "node24": {"@otu": "otu11"}, "node25": {"@otu": "otu12"}, "node26": {}, "node27": {"@otu": "otu13"}, "node28": {"@otu": "otu14"}, "node29": {}, "node3": {}, "node30": {}, "node31": {}, "node32": {}, "node33": {"@otu": "otu15"}, "node34": {"@otu": "otu16"}, "node35": {}, "node36": {"@otu": "otu17"}, "node37": {}, "node38": {}, "node39": {"@otu": "otu18"}, "node4": {}, "node40": {"@otu": "otu19"}, "node41": {}, "node42": {"@otu": "otu20"}, "node43": {}, "node44": {"@otu": "otu21"}, "node45": {"@otu": "otu22"}, "node46": {}, "node47": {}, "node48": {"@otu": "otu23"}, "node49": {}, "node5": {}, "node50": {"@otu": "otu24"}, "node51": {}, "node52": {"@otu": "otu25"}, "node53": {"@otu": "otu26"}, "node54": {}, "node55": {}, "node56": {"@otu": "otu27"}, "node57": {}, "node58": {"@otu": "otu28"}, "node59": {"@otu": "otu29"}, "node6": {}, "node60": {}, "node61": {}, "node62": {"@otu": "otu30"}, "node63": {"@otu": "otu31"}, "node64": {}, "node65": {"@otu": "otu32"}, "node66": {}, "node67": {"@otu": "otu33"}, "node68": {}, "node69": {"@otu": "otu34"}, "node7": {"@otu": "otu2"}, "node70": {}, "node71": {"@otu": "otu35"}, "node72": {}, "node73": {"@otu": "otu36"}, "node74": {}, "node75": {"@otu": "otu37"}, "node76": {"@otu": "otu38"}, "node77": {}, "node78": {}, "node79": {}, "node8": {"@otu": "otu3"}, "node80": {"@otu": "otu39"}, "node81": {}, "node82": {"@otu": "otu40"}, "node83": {"@otu": "otu41"}, "node84": {}, "node85": {}, "node86": {"@otu": "otu42"}, "node87": {"@otu": "otu43"}, "node88": {}, "node89": {"@otu": "otu44"}, "node9": {}, "node90": {}, "node91": {"@otu": "otu45"}, "node92": {"@otu": "otu46"}, "node93": {}, "node94": {}, "node95": {"@otu": "otu47"}, "node96": {}, "node97": {"@otu": "otu48"}, "node98": {}, "node99": {}}}}}}}}, "branch2sha": {"master": "c33806c9ee11db205ee8c02a42e31b1c3128e299"}, "commentHTML": "", "duplicateStudyIDs": [], "shardName": "phylesystem-1", "versionHistory": [{"id": "92a0b31deab49698c2e669c0de12a44e9f3d573e", "author_name": "dchesters", "author_email": "dc0357548934@live.co.uk", "date": "Mon, 17 Mar 2025 10:20:01 +0000", "date_ISO_8601": "2025-03-17 10:20:01 +0000", "relative_date": "1 year, 1 month ago", "message_subject": "Initial commit Freitas and Brown 2004", "message_body": "FreitasBrown2004.nwk\nPhylogeny figure gives (mostly) only genus names, species used taken from Table 1. Figure gives terminal Prepona though is not in the table (table does contain Preponini Archaeoprepona chalciope).\n\n(Update document 'ot_2702' via OpenTree API)"}, {"id": "787a77ea34e5ca8da6cb21dfbbcc232882f13d06", "author_name": "dchesters", "author_email": "dc0357548934@live.co.uk", "date": "Mon, 17 Mar 2025 10:17:14 +0000", "date_ISO_8601": "2025-03-17 10:17:14 +0000", "relative_date": "1 year, 1 month ago", "message_subject": "Update document 'ot_2702' via OpenTree API"}]}