{"sha": "c33806c9ee11db205ee8c02a42e31b1c3128e299", "data": {"nexml": {"@about": "#study", "@generator": "Open Tree API", "@id": "study", "@nexml2json": "1.2.1", "@nexmljson": "http://purl.org/opentree/nexson", "@version": "0.9", "@xmlns": {"$": "http://www.nexml.org/2009", "nex": "http://www.nexml.org/2009", "ot": "http://purl.org/opentree-terms#", "xhtml": "http://www.w3.org/1999/xhtml/vocab#", "xsd": "http://www.w3.org/2001/XMLSchema#", "xsi": "http://www.w3.org/2001/XMLSchema-instance"}, "^ot:agents": {"agent": [{"@description": "Open Tree NexSON validation", "@id": "peyotl-validator", "@name": "api.opentreeoflife.org/validate", "@url": "https://github.com/OpenTreeOfLife/peyotl", "@version": "0.0.4a", "invocation": {"commandLine": [], "otherProperty": [{"name": "pythonVersion", "value": "3.10.12"}, {"name": "pythonImplementation", "value": "CPython"}]}}, {"@description": "Web-based interface for submitting, editing, and reviewing studies in the Open Tree of Life project.", "@id": "opentree-curation-webapp", "@name": "OpenTree curation webapp", "@url": "https://github.com/OpenTreeOfLife/opentree", "@version": "0.0.0"}]}, "^ot:annotationEvents": {"annotation": [{"@dateCreated": "2025-09-16T01:04:36.925Z", "@description": "Aids for mapping study OTUs to OTT taxa", "@id": "otu-mapping-hints", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "OTU_MAPPING_HINTS", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"autoAcceptExactMatches": true, "searchContext": {"$": "Insects"}, "substitutions": {"substitution": [{"@active": false, "@valid": true, "new": {"$": ""}, "old": {"$": ""}}]}, "useFuzzyMatching": false}, "refersTo": {"@top": {"$": "meta"}}}]}, {"@dateCreated": "2025-09-16T01:04:36.925Z", "@description": "Describes external namesets merged into this study", "@id": "merged-namesets-metadata", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "MERGED_NAMESET_INFO", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"namesets": {"nameset": []}}, "refersTo": {"@top": {"$": "meta"}}}]}, {"@dateCreated": "2025-09-16T01:04:36.925Z", "@description": "Describes supporting data files for this study", "@id": "supporting-files-metadata", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "SUPPORTING_FILE_INFO", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"@movedToPermanentArchive": false, "files": {"file": [{"@filename": "LopezPerez2018Cassidini.nwk", "@size": 2067, "@type": "newick", "@url": "/curator/download/supporting_files.doc.b51bfe2846f5383d.4c6f70657a506572657a32303138436173736964696e692e6e776b.nwk", "description": {"$": "Source data for tree(s) 'tree1'"}, "sourceForTree": [{"$": "tree1"}]}, {"@filename": "image.png", "@size": 704, "@type": "", "@url": "/curator/supporting_files/download/supporting_files.doc.87431c9d36c86225.696d6167652e706e67.png", "description": {"$": ""}, "sourceForTree": []}, {"@filename": "image.png", "@size": 2229, "@type": "", "@url": "/curator/supporting_files/download/supporting_files.doc.91f4a7976fcfa3db.696d6167652e706e67.png", "description": {"$": ""}, "sourceForTree": []}, {"@filename": "image.png", "@size": 2229, "@type": "", "@url": "/curator/supporting_files/download/supporting_files.doc.82a7e33e0601c193.696d6167652e706e67.png", "description": {"$": ""}, "sourceForTree": []}]}}, "refersTo": {"@top": {"$": "meta"}}}]}, {"@id": "peyotl-validator-event", "@description": "Open Tree NexSON validation", "@wasAssociatedWithAgentId": "peyotl-validator", "@passedChecks": true, "@preserve": false, "message": [{"@code": "MISSING_OPTIONAL_KEY", "data": ["^ot:ottId"], "refersTo": {"@top": "otus", "@idref": "otu75", "@otusID": "otus1", "@otuID": "otu75"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:comment"], "refersTo": {"@top": "nexml", "@idref": "study"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["highestMintedElementIDs"], "refersTo": {"@top": "nexml", "@idref": "study"}, "@severity": "WARNING"}, {"@code": "MISSING_OPTIONAL_KEY", "data": ["^ot:branchLengthTimeUnit"], "refersTo": {"@top": "trees", "@idref": "tree1", "@treesID": "trees1", "@treeID": "tree1"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:nodeLabelMode", "^ot:nodeLabelTimeUnit", "^ot:reasonsToExcludeFromSynthesis"], "refersTo": {"@top": "trees", "@idref": "tree1", "@treesID": "trees1", "@treeID": "tree1"}, "@severity": "WARNING"}]}]}, "^ot:candidateTreeForSynthesis": [], "^ot:comment": "", "^ot:curatorName": ["dchesters"], "^ot:dataDeposit": {"@href": ""}, "^ot:focalClade": 567698, "^ot:focalCladeOTTTaxonName": "Chrysomelidae", "^ot:otusElementOrder": ["otus1"], "^ot:studyId": "ot_2936", "^ot:studyPublication": {"@href": "https://doi.org/10.1111/syen.12280"}, "^ot:studyPublicationReference": "L\u00d3PEZ\u2010P\u00c9REZ, S., ZARAGOZA\u2010CABALLERO, S., OCHOTERENA, H., & MORRONE, J. J. (2017). A phylogenetic study of the worldwide tribe Cassidini Gyllenhal, 1813 (Coleoptera: Chrysomelidae: Cassidinae) based on morphological data. Systematic Entomology, 43(2), 372\u2013386. Portico. https://doi.org/10.1111/syen.12280\n", "^ot:studyYear": 2018, "^ot:tag": [], "^ot:treesElementOrder": ["trees1"], "highestMintedElementIDs": {"agent": 0, "annotation": 0, "edge": 180, "message": 0, "node": 181, "otu": 91, "otus": 2, "tree": 1, "trees": 2}, "otusById": {"otus1": {"otuById": {"otu1": {"^ot:originalLabel": "Calyptocephala marginipennis", "^ot:ottId": 5044381, "^ot:ottTaxonName": "Calyptocephala marginipennis"}, "otu10": {"^ot:originalLabel": "Stolas illustris", "^ot:ottId": 4600205, "^ot:ottTaxonName": "Stolas illustris"}, "otu11": {"^ot:originalLabel": "Stolas punicea", "^ot:ottId": 4600293, "^ot:ottTaxonName": "Stolas punicea"}, "otu12": {"^ot:originalLabel": "Physonota alutacea", "^ot:ottId": 909486, "^ot:ottTaxonName": "Physonota alutacea"}, "otu13": {"^ot:originalLabel": "Physonota turgida", "^ot:ottId": 3372516, "^ot:ottTaxonName": "Physonota turgida"}, "otu14": {"^ot:originalLabel": "Platycycla deruta", "^ot:ottId": 3376658, "^ot:ottTaxonName": "Platycycla deruta"}, "otu15": {"^ot:originalLabel": "Eurypepla calochroma", "^ot:ottId": 3376309, "^ot:ottTaxonName": "Eurypepla calochroma"}, "otu16": {"^ot:originalLabel": "Physonota attenuata", "^ot:ottId": 3372521, "^ot:ottTaxonName": "Physonota attenuata"}, "otu17": {"^ot:originalLabel": "Physonota disjuncta", "^ot:ottId": 3372532, "^ot:ottTaxonName": "Physonota disjuncta"}, "otu18": {"^ot:originalLabel": "Orexita picta", "^ot:ottId": 4603145, "^ot:ottTaxonName": "Orexita picta"}, "otu19": {"^ot:originalLabel": "Emdenia maxima", "^ot:ottId": 4602132, "^ot:ottTaxonName": "Emdenia maxima"}, "otu2": {"^ot:originalLabel": "Omoteina humeralis", "^ot:ottId": 3376972, "^ot:ottTaxonName": "Omoteina humeralis"}, "otu20": {"^ot:originalLabel": "Coptocycla undecimpunctata", "^ot:ottId": 3372380, "^ot:ottTaxonName": "Coptocycla undecimpunctata"}, "otu21": {"^ot:originalLabel": "Nuzonia camerata", "^ot:ottId": 4602764, "^ot:ottTaxonName": "Nuzonia camerata"}, "otu22": {"^ot:originalLabel": "Cassida relicta", "^ot:ottId": 3371530, "^ot:ottTaxonName": "Cassida relicta"}, "otu23": {"^ot:originalLabel": "Cassida mera", "^ot:ottId": 3371722, "^ot:ottTaxonName": "Cassida mera"}, "otu24": {"^ot:originalLabel": "Oxylepus deflexicollis", "^ot:ottId": 4601787, "^ot:ottTaxonName": "Oxylepus deflexicollis"}, "otu25": {"^ot:originalLabel": "Oxylepus kossmati", "^ot:ottId": 4601786, "^ot:ottTaxonName": "Oxylepus kossmati"}, "otu26": {"^ot:originalLabel": "Ischyronota desertorum", "^ot:ottId": 4602275, "^ot:ottTaxonName": "Ischyronota desertorum"}, "otu27": {"^ot:originalLabel": "Enagria angulifera", "^ot:ottId": 3374801, "^ot:ottTaxonName": "Enagria angulifera"}, "otu28": {"^ot:originalLabel": "Enagria ovata", "^ot:ottId": 3373804, "^ot:ottTaxonName": "Enagria ovata"}, "otu29": {"^ot:originalLabel": "Trichaspis pilosula", "^ot:ottId": 3375902, "^ot:ottTaxonName": "Trichaspis pilosula"}, "otu3": {"^ot:originalLabel": "Paratrikona lerouxii", "^ot:ottId": 3375182, "^ot:ottTaxonName": "Paratrikona lerouxii"}, "otu30": {"^ot:originalLabel": "Agroiconota bivittata", "^ot:ottId": 375978, "^ot:ottTaxonName": "Agroiconota bivittata"}, "otu31": {"^ot:originalLabel": "Gratiana spadicea", "^ot:ottId": 4601756, "^ot:ottTaxonName": "Gratiana spadicea"}, "otu32": {"^ot:originalLabel": "Cassida murraea", "^ot:ottId": 3371743, "^ot:ottTaxonName": "Cassida murraea"}, "otu33": {"^ot:originalLabel": "Cassida nebulosa", "^ot:ottId": 943857, "^ot:ottTaxonName": "Cassida nebulosa"}, "otu34": {"^ot:originalLabel": "Deloyala guttata", "^ot:ottId": 284985, "^ot:ottTaxonName": "Deloyala guttata"}, "otu35": {"^ot:originalLabel": "Chersinellina heteropunctata", "^ot:ottId": 284986, "^ot:ottTaxonName": "Chersinellina heteropunctata"}, "otu36": {"^ot:originalLabel": "Charidotella zona", "^ot:ottId": 808654, "^ot:ottTaxonName": "Charidotella zona"}, "otu37": {"^ot:originalLabel": "Microctenochira bonvouloiri", "^ot:ottId": 4600410, "^ot:ottTaxonName": "Microctenochira bonvouloiri"}, "otu38": {"^ot:originalLabel": "Cassida circumdata", "^ot:ottId": 859753, "^ot:ottTaxonName": "Cassida circumdata"}, "otu39": {"^ot:originalLabel": "Plagiometriona buqueti", "^ot:ottId": 4600051, "^ot:ottTaxonName": "Plagiometriona buqueti"}, "otu4": {"^ot:originalLabel": "Dorynota monoceros", "^ot:ottId": 3377273, "^ot:ottTaxonName": "Dorynota monoceros"}, "otu40": {"^ot:originalLabel": "Helocassis testudinaria", "^ot:ottId": 4600355, "^ot:ottTaxonName": "Helocassis testudinaria"}, "otu41": {"^ot:originalLabel": "Gratiana graminea", "^ot:ottId": 4601755, "^ot:ottTaxonName": "Gratiana graminea"}, "otu42": {"^ot:originalLabel": "Gratiana pallidula", "^ot:ottId": 4601751, "^ot:ottTaxonName": "Gratiana pallidula"}, "otu43": {"^ot:originalLabel": "Cassida depicta", "^ot:ottId": 3371636, "^ot:ottTaxonName": "Cassida depicta"}, "otu44": {"^ot:originalLabel": "Cassida granula", "^ot:ottId": 3371739, "^ot:ottTaxonName": "Cassida granula"}, "otu45": {"^ot:originalLabel": "Chiridopsis aubei", "^ot:ottId": 4602331, "^ot:ottTaxonName": "Chiridopsis aubei"}, "otu46": {"^ot:originalLabel": "Acrocassis gibbipennis", "^ot:ottId": 4601580, "^ot:ottTaxonName": "Acrocassis gibbipennis"}, "otu47": {"^ot:originalLabel": "Charidotella sexpunctata", "^ot:ottId": 808655, "^ot:ottTaxonName": "Charidotella sexpunctata"}, "otu48": {"^ot:originalLabel": "Metrionella bilimeki", "^ot:ottId": 4600582, "^ot:ottTaxonName": "Pentispa bilimeki"}, "otu49": {"^ot:originalLabel": "Metrionella erratica", "^ot:ottId": 434663, "^ot:ottTaxonName": "Metrionella erratica"}, "otu5": {"^ot:originalLabel": "Paratrikona turritella", "^ot:ottId": 3375198, "^ot:ottTaxonName": "Paratrikona turritella"}, "otu50": {"^ot:originalLabel": "Microctenochira hieroglyphica", "^ot:ottId": 4600372, "^ot:ottTaxonName": "Microctenochira hieroglyphica"}, "otu51": {"^ot:originalLabel": "Tapinaspis wesmaeli", "^ot:ottId": 577826, "^ot:ottTaxonName": "Tapinaspis wesmaeli"}, "otu52": {"^ot:originalLabel": "Jonthonota nigripes", "^ot:ottId": 4601486, "^ot:ottTaxonName": "Jonthonota nigripes"}, "otu53": {"^ot:originalLabel": "Cteisella virescens", "^ot:ottId": 4599893, "^ot:ottTaxonName": "Cteisella virescens"}, "otu54": {"^ot:originalLabel": "Hybosinota nodulosa", "^ot:ottId": 4603165, "^ot:ottTaxonName": "Hybosinota nodulosa"}, "otu55": {"^ot:originalLabel": "Jonthonota mexicana", "^ot:ottId": 4600969, "^ot:ottTaxonName": "Ogdoecosta mexicana"}, "otu56": {"^ot:originalLabel": "Cteisella confusa", "^ot:ottId": 3371024, "^ot:ottTaxonName": "Chaetocnema confusa"}, "otu57": {"^ot:originalLabel": "Charidotis vitreata", "^ot:ottId": 808658, "^ot:ottTaxonName": "Charidotis vitreata"}, "otu58": {"^ot:originalLabel": "Plagiometriona praecincta", "^ot:ottId": 4600018, "^ot:ottTaxonName": "Plagiometriona praecincta"}, "otu59": {"^ot:originalLabel": "Coptocycla adamantina", "^ot:ottId": 401157, "^ot:ottTaxonName": "Coptocycla adamantina"}, "otu6": {"^ot:originalLabel": "Dorynota pubescens", "^ot:ottId": 3376771, "^ot:ottTaxonName": "Dorynota pubescens"}, "otu60": {"^ot:originalLabel": "Coptocycla ruficornis", "^ot:ottId": 3372383, "^ot:ottTaxonName": "Coptocycla ruficornis"}, "otu61": {"^ot:originalLabel": "Ischnocodia annulus", "^ot:ottId": 434667, "^ot:ottTaxonName": "Ischnocodia annulus"}, "otu62": {"^ot:originalLabel": "Conchyloctenia tripuncticollis", "^ot:ottId": 4602789, "^ot:ottTaxonName": "Conchyloctenia tripuncticollis"}, "otu63": {"^ot:originalLabel": "Laccoptera murrayi", "^ot:ottId": 4600595, "^ot:ottTaxonName": "Laccoptera murrayi"}, "otu64": {"^ot:originalLabel": "Cassida frontalis", "^ot:ottId": 3371888, "^ot:ottTaxonName": "Cassida frontalis"}, "otu65": {"^ot:originalLabel": "Parorectis rugosa", "^ot:ottId": 4602545, "^ot:ottTaxonName": "Parorectis rugosa"}, "otu66": {"^ot:originalLabel": "Glyphocassis lepida", "^ot:ottId": 4601477, "^ot:ottTaxonName": "Glyphocassis lepida"}, "otu67": {"^ot:originalLabel": "Hypocassida meridionalis", "^ot:ottId": 4603299, "^ot:ottTaxonName": "Hypocassida meridionalis"}, "otu68": {"^ot:originalLabel": "Hypocassida subferruginea", "^ot:ottId": 4603300, "^ot:ottTaxonName": "Hypocassida subferruginea"}, "otu69": {"^ot:originalLabel": "Cassida rugipennis", "^ot:ottId": 3371719, "^ot:ottTaxonName": "Cassida rugipennis"}, "otu7": {"^ot:originalLabel": "Dorynota pugionata", "^ot:ottId": 3374534, "^ot:ottTaxonName": "Dorynota pugionata"}, "otu70": {"^ot:originalLabel": "Laccoptera tredecimpunctata", "^ot:ottId": 4600613, "^ot:ottTaxonName": "Laccoptera tredecimpunctata"}, "otu71": {"^ot:originalLabel": "Laccoptera novemdecimnotata", "^ot:ottId": 4600626, "^ot:ottTaxonName": "Laccoptera novemdecimnotata"}, "otu72": {"^ot:originalLabel": "Laccoptera excavata", "^ot:ottId": 4600646, "^ot:ottTaxonName": "Laccoptera excavata"}, "otu73": {"^ot:originalLabel": "Laccoptera aurosa", "^ot:ottId": 4600629, "^ot:ottTaxonName": "Laccoptera aurosa"}, "otu74": {"^ot:originalLabel": "Laccoptera corrugata", "^ot:ottId": 4600610, "^ot:ottTaxonName": "Laccoptera corrugata"}, "otu75": {"^ot:originalLabel": "Aspidimorpha milliaris"}, "otu76": {"^ot:originalLabel": "Conchyloctenia hepatica", "^ot:ottId": 4602784, "^ot:ottTaxonName": "Conchyloctenia hepatica"}, "otu77": {"^ot:originalLabel": "Conchyloctenia signatipennis", "^ot:ottId": 4602790, "^ot:ottTaxonName": "Conchyloctenia signatipennis"}, "otu78": {"^ot:originalLabel": "Cassida tosta", "^ot:ottId": 3371685, "^ot:ottTaxonName": "Cassida tosta"}, "otu79": {"^ot:originalLabel": "Cassida dorsovittata", "^ot:ottId": 3371874, "^ot:ottTaxonName": "Cassida dorsovittata"}, "otu8": {"^ot:originalLabel": "Dorynota aurita", "^ot:ottId": 3374529, "^ot:ottTaxonName": "Dorynota aurita"}, "otu80": {"^ot:originalLabel": "Aspidimorpha deusta", "^ot:ottId": 3375990, "^ot:ottTaxonName": "Aspidimorpha deusta"}, "otu81": {"^ot:originalLabel": "Aspidimorpha chlorotica", "^ot:ottId": 3371235, "^ot:ottTaxonName": "Disonycha chlorotica"}, "otu82": {"^ot:originalLabel": "Aspidimorpha australasiae", "^ot:ottId": 3376703, "^ot:ottTaxonName": "Aspidimorpha australasiae"}, "otu83": {"^ot:originalLabel": "Aspidimorpha adhaerens", "^ot:ottId": 3376702, "^ot:ottTaxonName": "Aspidimorpha adhaerens"}, "otu84": {"^ot:originalLabel": "Aspidimorpha bilobata", "^ot:ottId": 3375549, "^ot:ottTaxonName": "Aspidimorpha bilobata"}, "otu85": {"^ot:originalLabel": "Coptocycla texana", "^ot:ottId": 3372373, "^ot:ottTaxonName": "Coptocycla texana"}, "otu86": {"^ot:originalLabel": "Coptocycla dorsoplagiata", "^ot:ottId": 3372368, "^ot:ottTaxonName": "Coptocycla dorsoplagiata"}, "otu87": {"^ot:originalLabel": "Coptocycla leprosa", "^ot:ottId": 284982, "^ot:ottTaxonName": "Coptocycla leprosa"}, "otu88": {"^ot:originalLabel": "Thlaspidosoma philippina", "^ot:ottId": 3373603, "^ot:ottTaxonName": "Thlaspidosoma philippina"}, "otu89": {"^ot:originalLabel": "Thlaspida biramosa", "^ot:ottId": 4603415, "^ot:ottTaxonName": "Thlaspida biramosa"}, "otu9": {"^ot:originalLabel": "Paranota ensifera", "^ot:ottId": 3373773, "^ot:ottTaxonName": "Paranota ensifera"}, "otu90": {"^ot:originalLabel": "Thlaspidosoma dohrni", "^ot:ottId": 3375645, "^ot:ottTaxonName": "Thlaspidosoma dohrni"}, "otu91": {"^ot:originalLabel": "Thlaspidosoma fallaciosa", "^ot:ottId": 3373605, "^ot:ottTaxonName": "Thlaspidosoma fallaciosa"}}}}, "treesById": {"trees1": {"@otus": "otus1", "^ot:treeElementOrder": ["tree1"], "treeById": {"tree1": {"@label": "Fig. 2, MP", "@xsi:type": "nex:FloatTree", "^ot:branchLengthDescription": "", "^ot:branchLengthMode": "ot:undefined", "^ot:curatedType": "Maximum parsimony ", "^ot:inGroupClade": "node23", "^ot:nodeLabelMode": "", "^ot:nodeLabelTimeUnit": "", "^ot:outGroupEdge": "", "^ot:reasonsToExcludeFromSynthesis": [], "^ot:rootNodeId": "node1", "^ot:specifiedRoot": "node1", "^ot:tag": [], "^ot:unrootedTree": false, "edgeBySourceId": {"node1": {"edge1": {"@source": "node1", "@target": "node2"}, "edge2": {"@source": "node1", "@target": "node3"}}, "node10": {"edge10": {"@source": "node10", "@target": "node11"}, "edge13": {"@source": "node10", "@target": "node14"}}, "node101": {"edge101": {"@source": "node101", "@target": "node102"}, "edge102": {"@source": "node101", "@target": "node103"}}, "node103": {"edge103": {"@source": "node103", "@target": "node104"}, "edge108": {"@source": "node103", "@target": "node109"}}, "node104": {"edge104": {"@source": "node104", "@target": "node105"}, "edge105": {"@source": "node104", "@target": "node106"}}, "node106": {"edge106": {"@source": "node106", "@target": "node107"}, "edge107": {"@source": "node106", "@target": "node108"}}, "node109": {"edge109": {"@source": "node109", "@target": "node110"}, "edge120": {"@source": "node109", "@target": "node121"}}, "node11": {"edge11": {"@source": "node11", "@target": "node12"}, "edge12": {"@source": "node11", "@target": "node13"}}, "node110": {"edge110": {"@source": "node110", "@target": "node111"}, "edge113": {"@source": "node110", "@target": "node114"}}, "node111": {"edge111": {"@source": "node111", "@target": "node112"}, "edge112": {"@source": "node111", "@target": "node113"}}, "node114": {"edge114": {"@source": "node114", "@target": "node115"}, "edge115": {"@source": "node114", "@target": "node116"}}, "node116": {"edge116": {"@source": "node116", "@target": "node117"}, "edge117": {"@source": "node116", "@target": "node118"}}, "node118": {"edge118": {"@source": "node118", "@target": "node119"}, "edge119": {"@source": "node118", "@target": "node120"}}, "node121": {"edge121": {"@source": "node121", "@target": "node122"}, "edge122": {"@source": "node121", "@target": "node123"}}, "node123": {"edge123": {"@source": "node123", "@target": "node124"}, "edge148": {"@source": "node123", "@target": "node149"}}, "node124": {"edge124": {"@source": "node124", "@target": "node125"}, "edge125": {"@source": "node124", "@target": "node126"}}, "node126": {"edge126": {"@source": "node126", "@target": "node127"}, "edge127": {"@source": "node126", "@target": "node128"}}, "node128": {"edge128": {"@source": "node128", "@target": "node129"}, "edge137": {"@source": "node128", "@target": "node138"}}, "node129": {"edge129": {"@source": "node129", "@target": "node130"}, "edge130": {"@source": "node129", "@target": "node131"}}, "node131": {"edge131": {"@source": "node131", "@target": "node132"}, "edge132": {"@source": "node131", "@target": "node133"}}, "node133": {"edge133": {"@source": "node133", "@target": "node134"}, "edge134": {"@source": "node133", "@target": "node135"}}, "node135": {"edge135": {"@source": "node135", "@target": "node136"}, "edge136": {"@source": "node135", "@target": "node137"}}, "node138": {"edge138": {"@source": "node138", "@target": "node139"}, "edge139": {"@source": "node138", "@target": "node140"}}, "node14": {"edge14": {"@source": "node14", "@target": "node15"}, "edge15": {"@source": "node14", "@target": "node16"}}, "node140": {"edge140": {"@source": "node140", "@target": "node141"}, "edge143": {"@source": "node140", "@target": "node144"}}, "node141": {"edge141": {"@source": "node141", "@target": "node142"}, "edge142": {"@source": "node141", "@target": "node143"}}, "node144": {"edge144": {"@source": "node144", "@target": "node145"}, "edge145": {"@source": "node144", "@target": "node146"}}, "node146": {"edge146": {"@source": "node146", "@target": "node147"}, "edge147": {"@source": "node146", "@target": "node148"}}, "node149": {"edge149": {"@source": "node149", "@target": "node150"}, "edge154": {"@source": "node149", "@target": "node155"}}, "node150": {"edge150": {"@source": "node150", "@target": "node151"}, "edge151": {"@source": "node150", "@target": "node152"}}, "node152": {"edge152": {"@source": "node152", "@target": "node153"}, "edge153": {"@source": "node152", "@target": "node154"}}, "node155": {"edge155": {"@source": "node155", "@target": "node156"}, "edge158": {"@source": "node155", "@target": "node159"}}, "node156": {"edge156": {"@source": "node156", "@target": "node157"}, "edge157": {"@source": "node156", "@target": "node158"}}, "node159": {"edge159": {"@source": "node159", "@target": "node160"}, "edge160": {"@source": "node159", "@target": "node161"}}, "node16": {"edge16": {"@source": "node16", "@target": "node17"}, "edge17": {"@source": "node16", "@target": "node18"}}, "node161": {"edge161": {"@source": "node161", "@target": "node162"}, "edge162": {"@source": "node161", "@target": "node163"}}, "node163": {"edge163": {"@source": "node163", "@target": "node164"}, "edge164": {"@source": "node163", "@target": "node165"}}, "node165": {"edge165": {"@source": "node165", "@target": "node166"}, "edge166": {"@source": "node165", "@target": "node167"}}, "node167": {"edge167": {"@source": "node167", "@target": "node168"}, "edge168": {"@source": "node167", "@target": "node169"}}, "node169": {"edge169": {"@source": "node169", "@target": "node170"}, "edge174": {"@source": "node169", "@target": "node175"}}, "node170": {"edge170": {"@source": "node170", "@target": "node171"}, "edge171": {"@source": "node170", "@target": "node172"}}, "node172": {"edge172": {"@source": "node172", "@target": "node173"}, "edge173": {"@source": "node172", "@target": "node174"}}, "node175": {"edge175": {"@source": "node175", "@target": "node176"}, "edge176": {"@source": "node175", "@target": "node177"}}, "node177": {"edge177": {"@source": "node177", "@target": "node178"}, "edge178": {"@source": "node177", "@target": "node179"}}, "node179": {"edge179": {"@source": "node179", "@target": "node180"}, "edge180": {"@source": "node179", "@target": "node181"}}, "node19": {"edge19": {"@source": "node19", "@target": "node20"}, "edge22": {"@source": "node19", "@target": "node23"}}, "node20": {"edge20": {"@source": "node20", "@target": "node21"}, "edge21": {"@source": "node20", "@target": "node22"}}, "node23": {"edge23": {"@source": "node23", "@target": "node24"}, "edge26": {"@source": "node23", "@target": "node27"}}, "node24": {"edge24": {"@source": "node24", "@target": "node25"}, "edge25": {"@source": "node24", "@target": "node26"}}, "node27": {"edge27": {"@source": "node27", "@target": "node28"}, "edge28": {"@source": "node27", "@target": "node29"}}, "node29": {"edge29": {"@source": "node29", "@target": "node30"}, "edge30": {"@source": "node29", "@target": "node31"}}, "node3": {"edge18": {"@source": "node3", "@target": "node19"}, "edge3": {"@source": "node3", "@target": "node4"}}, "node31": {"edge31": {"@source": "node31", "@target": "node32"}, "edge34": {"@source": "node31", "@target": "node35"}}, "node32": {"edge32": {"@source": "node32", "@target": "node33"}, "edge33": {"@source": "node32", "@target": "node34"}}, "node35": {"edge35": {"@source": "node35", "@target": "node36"}, "edge40": {"@source": "node35", "@target": "node41"}}, "node36": {"edge36": {"@source": "node36", "@target": "node37"}, "edge37": {"@source": "node36", "@target": "node38"}}, "node38": {"edge38": {"@source": "node38", "@target": "node39"}, "edge39": {"@source": "node38", "@target": "node40"}}, "node4": {"edge4": {"@source": "node4", "@target": "node5"}, "edge7": {"@source": "node4", "@target": "node8"}}, "node41": {"edge41": {"@source": "node41", "@target": "node42"}, "edge42": {"@source": "node41", "@target": "node43"}}, "node43": {"edge43": {"@source": "node43", "@target": "node44"}, "edge52": {"@source": "node43", "@target": "node53"}}, "node44": {"edge44": {"@source": "node44", "@target": "node45"}, "edge45": {"@source": "node44", "@target": "node46"}}, "node46": {"edge46": {"@source": "node46", "@target": "node47"}, "edge47": {"@source": "node46", "@target": "node48"}}, "node48": {"edge48": {"@source": "node48", "@target": "node49"}, "edge49": {"@source": "node48", "@target": "node50"}}, "node5": {"edge5": {"@source": "node5", "@target": "node6"}, "edge6": {"@source": "node5", "@target": "node7"}}, "node50": {"edge50": {"@source": "node50", "@target": "node51"}, "edge51": {"@source": "node50", "@target": "node52"}}, "node53": {"edge53": {"@source": "node53", "@target": "node54"}, "edge56": {"@source": "node53", "@target": "node57"}}, "node54": {"edge54": {"@source": "node54", "@target": "node55"}, "edge55": {"@source": "node54", "@target": "node56"}}, "node57": {"edge57": {"@source": "node57", "@target": "node58"}, "edge60": {"@source": "node57", "@target": "node61"}}, "node58": {"edge58": {"@source": "node58", "@target": "node59"}, "edge59": {"@source": "node58", "@target": "node60"}}, "node61": {"edge61": {"@source": "node61", "@target": "node62"}, "edge66": {"@source": "node61", "@target": "node67"}}, "node62": {"edge62": {"@source": "node62", "@target": "node63"}, "edge63": {"@source": "node62", "@target": "node64"}}, "node64": {"edge64": {"@source": "node64", "@target": "node65"}, "edge65": {"@source": "node64", "@target": "node66"}}, "node67": {"edge67": {"@source": "node67", "@target": "node68"}, "edge70": {"@source": "node67", "@target": "node71"}}, "node68": {"edge68": {"@source": "node68", "@target": "node69"}, "edge69": {"@source": "node68", "@target": "node70"}}, "node71": {"edge71": {"@source": "node71", "@target": "node72"}, "edge72": {"@source": "node71", "@target": "node73"}}, "node73": {"edge73": {"@source": "node73", "@target": "node74"}, "edge92": {"@source": "node73", "@target": "node93"}}, "node74": {"edge74": {"@source": "node74", "@target": "node75"}, "edge75": {"@source": "node74", "@target": "node76"}}, "node76": {"edge76": {"@source": "node76", "@target": "node77"}, "edge77": {"@source": "node76", "@target": "node78"}}, "node78": {"edge78": {"@source": "node78", "@target": "node79"}, "edge81": {"@source": "node78", "@target": "node82"}}, "node79": {"edge79": {"@source": "node79", "@target": "node80"}, "edge80": {"@source": "node79", "@target": "node81"}}, "node8": {"edge8": {"@source": "node8", "@target": "node9"}, "edge9": {"@source": "node8", "@target": "node10"}}, "node82": {"edge82": {"@source": "node82", "@target": "node83"}, "edge85": {"@source": "node82", "@target": "node86"}}, "node83": {"edge83": {"@source": "node83", "@target": "node84"}, "edge84": {"@source": "node83", "@target": "node85"}}, "node86": {"edge86": {"@source": "node86", "@target": "node87"}, "edge89": {"@source": "node86", "@target": "node90"}}, "node87": {"edge87": {"@source": "node87", "@target": "node88"}, "edge88": {"@source": "node87", "@target": "node89"}}, "node90": {"edge90": {"@source": "node90", "@target": "node91"}, "edge91": {"@source": "node90", "@target": "node92"}}, "node93": {"edge93": {"@source": "node93", "@target": "node94"}, "edge98": {"@source": "node93", "@target": "node99"}}, "node94": {"edge94": {"@source": "node94", "@target": "node95"}, "edge95": {"@source": "node94", "@target": "node96"}}, "node96": {"edge96": {"@source": "node96", "@target": "node97"}, "edge97": {"@source": "node96", "@target": "node98"}}, "node99": {"edge100": {"@source": "node99", "@target": "node101"}, "edge99": {"@source": "node99", "@target": "node100"}}}, "nodeById": {"node1": {"@root": true}, "node10": {}, "node100": {"@otu": "otu50"}, "node101": {}, "node102": {"@otu": "otu51"}, "node103": {}, "node104": {}, "node105": {"@otu": "otu52"}, "node106": {}, "node107": {"@otu": "otu53"}, "node108": {"@otu": "otu54"}, "node109": {}, "node11": {}, "node110": {}, "node111": {}, "node112": {"@otu": "otu55"}, "node113": {"@otu": "otu56"}, "node114": {}, "node115": {"@otu": "otu57"}, "node116": {}, "node117": {"@otu": "otu58"}, "node118": {}, "node119": {"@otu": "otu59"}, "node12": {"@otu": "otu5"}, "node120": {"@otu": "otu60"}, "node121": {}, "node122": {"@otu": "otu61"}, "node123": {}, "node124": {}, "node125": {"@otu": "otu62"}, "node126": {}, "node127": {"@otu": "otu63"}, "node128": {}, "node129": {}, "node13": {"@otu": "otu6"}, "node130": {"@otu": "otu64"}, "node131": {}, "node132": {"@otu": "otu65"}, "node133": {}, "node134": {"@otu": "otu66"}, "node135": {}, "node136": {"@otu": "otu67"}, "node137": {"@otu": "otu68"}, "node138": {}, "node139": {"@otu": "otu69"}, "node14": {}, "node140": {}, "node141": {}, "node142": {"@otu": "otu70"}, "node143": {"@otu": "otu71"}, "node144": {}, "node145": {"@otu": "otu72"}, "node146": {}, "node147": {"@otu": "otu73"}, "node148": {"@otu": "otu74"}, "node149": {}, "node15": {"@otu": "otu7"}, "node150": {}, "node151": {"@otu": "otu75"}, "node152": {}, "node153": {"@otu": "otu76"}, "node154": {"@otu": "otu77"}, "node155": {}, "node156": {}, "node157": {"@otu": "otu78"}, "node158": {"@otu": "otu79"}, "node159": {}, "node16": {}, "node160": {"@otu": "otu80"}, "node161": {}, "node162": {"@otu": "otu81"}, "node163": {}, "node164": {"@otu": "otu82"}, "node165": {}, "node166": {"@otu": "otu83"}, "node167": {}, "node168": {"@otu": "otu84"}, "node169": {}, "node17": {"@otu": "otu8"}, "node170": {}, "node171": {"@otu": "otu85"}, "node172": {}, "node173": {"@otu": "otu86"}, "node174": {"@otu": "otu87"}, "node175": {}, "node176": {"@otu": "otu88"}, "node177": {}, "node178": {"@otu": "otu89"}, "node179": {}, "node18": {"@otu": "otu9"}, "node180": {"@otu": "otu90"}, "node181": {"@otu": "otu91"}, "node19": {}, "node2": {"@otu": "otu1"}, "node20": {}, "node21": {"@otu": "otu10"}, "node22": {"@otu": "otu11"}, "node23": {}, "node24": {}, "node25": {"@otu": "otu12"}, "node26": {"@otu": "otu13"}, "node27": {}, "node28": {"@otu": "otu14"}, "node29": {}, "node3": {}, "node30": {"@otu": "otu15"}, "node31": {}, "node32": {}, "node33": {"@otu": "otu16"}, "node34": {"@otu": "otu17"}, "node35": {}, "node36": {}, "node37": {"@otu": "otu18"}, "node38": {}, "node39": {"@otu": "otu19"}, "node4": {}, "node40": {"@otu": "otu20"}, "node41": {}, "node42": {"@otu": "otu21"}, "node43": {}, "node44": {}, "node45": {"@otu": "otu22"}, "node46": {}, "node47": {"@otu": "otu23"}, "node48": {}, "node49": {"@otu": "otu24"}, "node5": {}, "node50": {}, "node51": {"@otu": "otu25"}, "node52": {"@otu": "otu26"}, "node53": {}, "node54": {}, "node55": {"@otu": "otu27"}, "node56": {"@otu": "otu28"}, "node57": {}, "node58": {}, "node59": {"@otu": "otu29"}, "node6": {"@otu": "otu2"}, "node60": {"@otu": "otu30"}, "node61": {}, "node62": {}, "node63": {"@otu": "otu31"}, "node64": {}, "node65": {"@otu": "otu32"}, "node66": {"@otu": "otu33"}, "node67": {}, "node68": {}, "node69": {"@otu": "otu34"}, "node7": {"@otu": "otu3"}, "node70": {"@otu": "otu35"}, "node71": {}, "node72": {"@otu": "otu36"}, "node73": {}, "node74": {}, "node75": {"@otu": "otu37"}, "node76": {}, "node77": {"@otu": "otu38"}, "node78": {}, "node79": {}, "node8": {}, "node80": {"@otu": "otu39"}, "node81": {"@otu": "otu40"}, "node82": {}, "node83": {}, "node84": {"@otu": "otu41"}, "node85": {"@otu": "otu42"}, "node86": {}, "node87": {}, "node88": {"@otu": "otu43"}, "node89": {"@otu": "otu44"}, "node9": {"@otu": "otu4"}, "node90": {}, "node91": {"@otu": "otu45"}, "node92": {"@otu": "otu46"}, "node93": {}, "node94": {}, "node95": {"@otu": "otu47"}, "node96": {}, "node97": {"@otu": "otu48"}, "node98": {"@otu": "otu49"}, "node99": {}}}}}}}}, "branch2sha": {"master": "c33806c9ee11db205ee8c02a42e31b1c3128e299"}, "commentHTML": "", "duplicateStudyIDs": [], "shardName": "phylesystem-1", "versionHistory": [{"id": "15806c99b9fba84d75022500977e7bac07bb05d0", "author_name": "dchesters", "author_email": "dc0357548934@live.co.uk", "date": "Tue, 16 Sep 2025 01:08:13 +0000", "date_ISO_8601": "2025-09-16 01:08:13 +0000", "relative_date": "7 months ago", "message_subject": "Initial commit Lopez-Perez et al 2018", "message_body": "LopezPerez2018Cassidini.nwk\n\n(Update document 'ot_2936' via OpenTree API)"}, {"id": "0b47c47973f0eba7d01bae5ef090d980f02991c7", "author_name": "dchesters", "author_email": "dc0357548934@live.co.uk", "date": "Tue, 16 Sep 2025 01:04:34 +0000", "date_ISO_8601": "2025-09-16 01:04:34 +0000", "relative_date": "7 months ago", "message_subject": "Update document 'ot_2936' via OpenTree API"}]}