{"sha": "c33806c9ee11db205ee8c02a42e31b1c3128e299", "data": {"nexml": {"@generator": "org.nexml.model.impl.DocumentImpl", "@id": "S14185", "@nexml2json": "1.2.1", "@version": "0.9", "@xmlns": {"$": "http://www.nexml.org/2009", "dc": "http://purl.org/dc/elements/1.1/", "dcterms": "http://purl.org/dc/terms/", "nex": "http://www.nexml.org/2009", "prism": "http://prismstandard.org/namespaces/1.2/basic/", "rdf": "http://www.w3.org/1999/02/22-rdf-syntax-ns#", "rdfs": "http://www.w3.org/2000/01/rdf-schema#", "skos": "http://www.w3.org/2004/02/skos/core#", "tb": "http://purl.org/phylo/treebase/2.0/terms#", "xsd": "http://www.w3.org/2001/XMLSchema#", "xsi": "http://www.w3.org/2001/XMLSchema-instance"}, "^dc:contributor": ["Barreto R.", "Crous P.W.", "Duarte L.L.", "Woudenberg J.", "Alves J.L."], "^dc:creator": "Alves J.L., Woudenberg J., Duarte L.L., Crous P.W., & Barreto R.", "^dc:date": "2013-06-24", "^dc:publisher": "Persoonia: Molecular Phylogeny and Evolution of Fungi", "^dc:subject": ["multi-gene phylogeny", "host-range", "fungal pathogens", "Alternaria"], "^dc:title": "Reappraisal of the genus Alternariaster (Dothideomycetes)", "^dcterms:bibliographicCitation": "Alves J.L., Woudenberg J., Duarte L.L., Crous P.W., & Barreto R. 2013. Reappraisal of the genus Alternariaster (Dothideomycetes). Persoonia: Molecular Phylogeny and Evolution of Fungi, .", "^ot:agents": {"agent": [{"@description": "Open Tree NexSON validation", "@id": "peyotl-validator", "@name": "api.opentreeoflife.org/validate", "@url": "https://github.com/OpenTreeOfLife/peyotl", "@version": "0.0.4a", "invocation": {"commandLine": [], "otherProperty": [{"name": "pythonVersion", "value": "2.7.9"}, {"name": "pythonImplementation", "value": "CPython"}]}}, {"@description": "Web-based interface for submitting, editing, and reviewing studies in the Open Tree of Life project.", "@id": "opentree-curation-webapp", "@name": "OpenTree curation webapp", "@url": "https://github.com/OpenTreeOfLife/opentree", "@version": "0.0.0"}]}, "^ot:annotationEvents": {"annotation": [{"@dateCreated": "2015-09-01T18:22:22.112Z", "@description": "Aids for mapping study OTUs to OTT taxa", "@id": "otu-mapping-hints", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "OTU_MAPPING_HINTS", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"searchContext": {"$": "Ascomycetes"}, "substitutions": {"substitution": [{"@active": true, "@valid": true, "new": {"$": "$1"}, "old": {"$": "^(\\S*\\s+\\S*).*"}}]}, "useFuzzyMatching": true}, "refersTo": {"@top": {"$": "meta"}}}]}, {"@dateCreated": "2015-09-01T18:22:22.112Z", "@description": "Describes supporting data files for this study", "@id": "supporting-files-metadata", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "SUPPORTING_FILE_INFO", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"@movedToPermanentArchive": false, "files": {"file": []}}, "refersTo": {"@top": {"$": "meta"}}}]}, {"@id": "peyotl-validator-event", "@description": "Open Tree NexSON validation", "@wasAssociatedWithAgentId": "peyotl-validator", "@passedChecks": true, "@preserve": false, "message": [{"@code": "UNRECOGNIZED_KEY", "data": ["^dc:contributor", "^dc:creator", "^dc:date", "^dc:publisher", "^dc:subject", "^dc:title", "^dcterms:bibliographicCitation", "^ot:comment", "^prism:creationDate", "^prism:modificationDate", "^prism:publicationDate", "^prism:publicationName", "^prism:section", "^skos:changeNote", "^skos:historyNote", "^tb:identifier.study", "^tb:title.study"], "refersTo": {"@top": "nexml", "@idref": "S14185"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tb21070", "@treesID": "Tb21070"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^skos:historyNote"], "refersTo": {"@top": "trees", "@idref": "Tb21070", "@treesID": "Tb21070"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "otus", "@idref": "Tls30804", "@otusID": "Tls30804"}, "@severity": "WARNING"}, {"@code": "MULTIPLE_TIPS_MAPPED_TO_OTT_ID", "data": ["Tl1086616", "Tl1086645"], "refersTo": {"@top": "otus", "@idref": "Tls30804", "@otusID": "Tls30804"}, "@severity": "WARNING"}, {"@code": "MULTIPLE_TIPS_MAPPED_TO_OTT_ID", "data": ["Tl1086630", "Tl1086652"], "refersTo": {"@top": "otus", "@idref": "Tls30804", "@otusID": "Tls30804"}, "@severity": "WARNING"}, {"@code": "MULTIPLE_TIPS_MAPPED_TO_OTT_ID", "data": ["Tl1086644", "Tl1086646", "Tl1086648", "Tl1086653", "Tl1086655", "Tl1086665"], "refersTo": {"@top": "otus", "@idref": "Tls30804", "@otusID": "Tls30804"}, "@severity": "WARNING"}, {"@code": "MULTIPLE_TIPS_MAPPED_TO_OTT_ID", "data": ["Tl1086649", "Tl1086662"], "refersTo": {"@top": "otus", "@idref": "Tls30804", "@otusID": "Tls30804"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^skos:historyNote"], "refersTo": {"@top": "otus", "@idref": "Tls30804", "@otusID": "Tls30804"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069683", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069683"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069684", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069684"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069685", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069685"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069686", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069686"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069690", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069690"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:isTaxonExemplar"], "refersTo": {"@top": "trees", "@idref": "Tn10069691", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069691"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069692", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069692"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069695", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069695"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069697", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069697"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069699", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069699"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069700", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069700"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069702", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069702"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069703", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069703"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069704", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069704"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069706", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069706"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069707", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069707"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:isTaxonExemplar"], "refersTo": {"@top": "trees", "@idref": "Tn10069708", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069708"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:isTaxonExemplar"], "refersTo": {"@top": "trees", "@idref": "Tn10069710", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069710"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069714", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069714"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069715", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069715"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:isTaxonExemplar"], "refersTo": {"@top": "trees", "@idref": "Tn10069717", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069717"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069718", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069718"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069719", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069719"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069721", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069721"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069722", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069722"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069723", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069723"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:isTaxonExemplar"], "refersTo": {"@top": "trees", "@idref": "Tn10069724", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069724"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:isTaxonExemplar"], "refersTo": {"@top": "trees", "@idref": "Tn10069726", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069726"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069727", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069727"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069729", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069729"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069730", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069730"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069736", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069736"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069738", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069738"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:isTaxonExemplar"], "refersTo": {"@top": "trees", "@idref": "Tn10069740", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069740"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069741", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069741"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:isTaxonExemplar"], "refersTo": {"@top": "trees", "@idref": "Tn10069743", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069743"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:isTaxonExemplar"], "refersTo": {"@top": "trees", "@idref": "Tn10069746", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069746"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069748", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069748"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069752", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069752"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069754", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069754"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069757", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069757"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069758", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069758"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069759", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069759"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069763", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069763"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069764", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069764"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069767", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069767"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069770", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069770"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069772", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069772"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069773", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069773"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069774", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069774"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069775", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069775"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069776", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069776"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069777", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069777"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:isTaxonExemplar"], "refersTo": {"@top": "trees", "@idref": "Tn10069778", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069778"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069782", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069782"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069783", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069783"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069787", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069787"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069789", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069789"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069790", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069790"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069792", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069792"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069793", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069793"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069794", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069794"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["@label"], "refersTo": {"@top": "trees", "@idref": "Tn10069795", "@treesID": "Tb21070", "@treeID": "Tr63300", "@nodeID": "Tn10069795"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:nodeLabelMode", "^ot:nodeLabelTimeUnit", "^tb:kind.tree", "^tb:ntax.tree", "^tb:quality.tree", "^tb:type.tree"], "refersTo": {"@top": "trees", "@idref": "Tr63300", "@treesID": "Tb21070", "@treeID": "Tr63300"}, "@severity": "WARNING"}]}]}, "^ot:candidateTreeForSynthesis": ["Tr63300"], "^ot:comment": "", "^ot:curatorName": ["Romina Gazis", "Karen Cranston"], "^ot:dataDeposit": {"@href": "http://purl.org/phylo/treebase/phylows/study/TB2:S14185"}, "^ot:focalClade": 4081335, "^ot:focalCladeOTTTaxonName": "Alternariaster", "^ot:notIntendedForSynthesis": false, "^ot:otusElementOrder": ["Tls30804"], "^ot:studyId": "ot_389", "^ot:studyPublication": {"@href": "http://dx.doi.org/10.3767/003158513x669030"}, "^ot:studyPublicationReference": "J. L. Alves, J. H. C. Woudenberg, L. L. Duarte, P. W. Crous, R. W. Barreto, 2013, 'Reappraisal of the genus Alternariaster (Dothideomycetes)', Persoonia - Molecular Phylogeny and Evolution of Fungi, vol. 31, no. 1, pp. 77-85", "^ot:studyYear": 2013, "^ot:tag": [], "^ot:taxonLinkPrefixes": {"@ubio": "http://www.ubio.org/authority/metadata.php?lsid=urn:lsid:ubio.org:namebank:", "@uniprot": "http://purl.uniprot.org/taxonomy/"}, "^ot:treesElementOrder": ["Tb21070"], "^prism:creationDate": "2013-04-26", "^prism:modificationDate": "2013-06-24", "^prism:publicationDate": "2013", "^prism:publicationName": "Persoonia: Molecular Phylogeny and Evolution of Fungi", "^prism:section": "Study", "^skos:changeNote": "Generated on Tue Sep 01 14:22:15 EDT 2015", "^skos:historyNote": "Mapped from TreeBASE schema using org.cipres.treebase.domain.nexus.nexml.NexmlDocumentWriter@296f2bc0 $Rev: 1060 $", "^tb:identifier.study": "14185", "^tb:title.study": "Reappraisal of the genus Alternariaster (Dothideomycetes)", "otusById": {"Tls30804": {"@label": "Taxa", "^skos:historyNote": "Mapped from TreeBASE schema using org.cipres.treebase.domain.nexus.nexml.NexmlOTUWriter@3eee0117 $Rev: 1040 $", "otuById": {"Tl1086615": {"^ot:originalLabel": "Cucurbitaria berberidis", "^ot:ottId": 659811, "^ot:ottTaxonName": "Cucurbitaria berberidis", "^ot:taxonLink": {"@tb:identifier.taxon": 7753, "@tb:identifier.taxonVariant": 18661, "@ubio": "1449024", "@uniprot": "45142"}}, "Tl1086616": {"^ot:originalLabel": "Leptosphaeria conoidea", "^ot:ottId": 538157, "^ot:ottTaxonName": "Leptosphaeria doliolum", "^ot:taxonLink": {"@tb:identifier.taxon": 618208, "@tb:identifier.taxonVariant": 827572, "@ubio": "3103627"}}, "Tl1086617": {"^ot:originalLabel": "Plenodomus libanotidis", "^ot:ottId": 1010751, "^ot:ottTaxonName": "Plenodomus libanotidis"}, "Tl1086618": {"^ot:originalLabel": "Plenodomus lindquistii", "^ot:ottId": 784103, "^ot:ottTaxonName": "Plenodomus lindquistii"}, "Tl1086619": {"^ot:originalLabel": "Pyrenochaeta cava", "^ot:ottId": 948556, "^ot:ottTaxonName": "Pyrenochaeta cava", "^ot:taxonLink": {"@tb:identifier.taxon": 615202, "@tb:identifier.taxonVariant": 822758, "@ubio": "1425684", "@uniprot": "243024"}}, "Tl1086620": {"^ot:originalLabel": "Plenodomus visci", "^ot:ottId": 552833, "^ot:ottTaxonName": "Plenodomus visci"}, "Tl1086621": {"^ot:originalLabel": "Coniothyrium dolichi", "^ot:ottId": 928515, "^ot:ottTaxonName": "Coniothyrium dolichi"}, "Tl1086622": {"^ot:originalLabel": "Paraleptosphaeria macrospora", "^ot:ottId": 842111, "^ot:ottTaxonName": "Paraleptosphaeria macrospora"}, "Tl1086623": {"^ot:originalLabel": "Leptosphaeria rubefaciens", "^ot:ottId": 877838, "^ot:ottTaxonName": "Leptosphaeria rubefaciens"}, "Tl1086624": {"^ot:originalLabel": "Leptosphaeria errabunda", "^ot:ottId": 231138, "^ot:ottTaxonName": "Leptosphaeria errabunda"}, "Tl1086625": {"^ot:originalLabel": "Heterospora chenopodii", "^ot:ottId": 31674, "^ot:ottTaxonName": "Heterospora chenopodii"}, "Tl1086626": {"^ot:originalLabel": "Plenodomus lingam", "^ot:ottId": 581438, "^ot:ottTaxonName": "Leptosphaeria maculans", "^ot:taxonLink": {"@tb:identifier.taxon": 618209, "@tb:identifier.taxonVariant": 827573, "@ubio": "3264215"}}, "Tl1086627": {"^ot:originalLabel": "Heterospora dimorphospora", "^ot:ottId": 681676, "^ot:ottTaxonName": "Heterospora dimorphospora"}, "Tl1086628": {"^ot:originalLabel": "Plenodomus enteroleucus", "^ot:ottId": 630079, "^ot:ottTaxonName": "Plenodomus enteroleucus"}, "Tl1086629": {"^ot:originalLabel": "Leptosphaeria sclerotioides", "^ot:ottId": 877826, "^ot:ottTaxonName": "Leptosphaeria sclerotioides"}, "Tl1086630": {"^ot:originalLabel": "Alternariaster bidentis CBS 134185", "^ot:ottId": 5318971, "^ot:ottTaxonName": "Alternariaster bidentis"}, "Tl1086631": {"^ot:originalLabel": "Plenodomus chrysanthemi", "^ot:ottId": 4387, "^ot:ottTaxonName": "Plenodomus chrysanthemi"}, "Tl1086632": {"^ot:originalLabel": "Leptosphaeria pedicularis", "^ot:ottId": 1017102, "^ot:ottTaxonName": "Leptosphaeria pedicularis"}, "Tl1086633": {"^ot:originalLabel": "Paraleptosphaeria nitschkei", "^ot:ottId": 707017, "^ot:ottTaxonName": "Paraleptosphaeria nitschkei"}, "Tl1086634": {"^ot:originalLabel": "Plenodomus wasabiae", "^ot:ottId": 721356, "^ot:ottTaxonName": "Phoma wasabiae", "^ot:taxonLink": {"@tb:identifier.taxon": 120817, "@tb:identifier.taxonVariant": 198695, "@ubio": "5960944", "@uniprot": "118260"}}, "Tl1086635": {"^ot:originalLabel": "Plenodomus pimpinellae", "^ot:ottId": 707011, "^ot:ottTaxonName": "Plenodomus pimpinellae"}, "Tl1086636": {"^ot:originalLabel": "Leptosphaeria veronicae", "^ot:ottId": 836004, "^ot:ottTaxonName": "Leptosphaeria veronicae"}, "Tl1086637": {"^ot:originalLabel": "Paraleptosphaeria orobanches", "^ot:ottId": 877842, "^ot:ottTaxonName": "Paraleptosphaeria orobanches"}, "Tl1086638": {"^ot:originalLabel": "Plenodomus lupini", "^ot:ottId": 168922, "^ot:ottTaxonName": "Plenodomus lupini"}, "Tl1086639": {"^ot:originalLabel": "Phoma herbarum", "^ot:ottId": 437937, "^ot:ottTaxonName": "Phoma herbarum", "^ot:taxonLink": {"@tb:identifier.taxon": 617688, "@tb:identifier.taxonVariant": 826846, "@ubio": "3872348", "@uniprot": "73001"}}, "Tl1086640": {"^ot:originalLabel": "Plenodomus congestus", "^ot:ottId": 309136, "^ot:ottTaxonName": "Plenodomus congestus"}, "Tl1086641": {"^ot:originalLabel": "Subplenodomus valerianae", "^ot:ottId": 4382, "^ot:ottTaxonName": "Subplenodomus valerianae"}, "Tl1086642": {"^ot:originalLabel": "Plenodomus collinsoniae", "^ot:ottId": 1010710, "^ot:ottTaxonName": "Plenodomus collinsoniae"}, "Tl1086643": {"^ot:originalLabel": "Plenodomus hendersoniae", "^ot:ottId": 1010779, "^ot:ottTaxonName": "Plenodomus hendersoniae"}, "Tl1086644": {"^ot:originalLabel": "Alternariaster helianthi CBS 327.69", "^ot:ottId": 4081336, "^ot:ottTaxonName": "Alternariaster helianthi"}, "Tl1086645": {"^ot:originalLabel": "Leptosphaeria doliolum", "^ot:ottId": 538157, "^ot:ottTaxonName": "Leptosphaeria doliolum", "^ot:taxonLink": {"@tb:identifier.taxon": 15705, "@tb:identifier.taxonVariant": 36822, "@ubio": "3872322", "@uniprot": "28988"}}, "Tl1086646": {"^ot:originalLabel": "Alternariaster helianthi CBS 134018", "^ot:ottId": 4081336, "^ot:ottTaxonName": "Alternariaster helianthi"}, "Tl1086647": {"^ot:originalLabel": "Coniothyrium carteri", "^ot:ottId": 928511, "^ot:ottTaxonName": "Coniothyrium carteri"}, "Tl1086648": {"^ot:originalLabel": "Alternariaster helianthi CBS 134019", "^ot:ottId": 4081336, "^ot:ottTaxonName": "Alternariaster helianthi"}, "Tl1086649": {"^ot:originalLabel": "Coniothyrium telephii CBS 101636", "^ot:ottId": 948561, "^ot:ottTaxonName": "Coniothyrium telephii"}, "Tl1086650": {"^ot:originalLabel": "Coniothyrium palmarum", "^ot:ottId": 43686, "^ot:ottTaxonName": "Coniothyrium palmarum", "^ot:taxonLink": {"@tb:identifier.taxon": 6854, "@tb:identifier.taxonVariant": 16606, "@ubio": "3872347", "@uniprot": "300248"}}, "Tl1086651": {"^ot:originalLabel": "Plenodomus agnitus", "^ot:ottId": 230683, "^ot:ottTaxonName": "Plenodomus agnitus"}, "Tl1086652": {"^ot:originalLabel": "Alternariaster bidentis CBS 134021", "^ot:ottId": 5318971, "^ot:ottTaxonName": "Alternariaster bidentis"}, "Tl1086653": {"^ot:originalLabel": "Alternariaster helianthi CBS 134020", "^ot:ottId": 4081336, "^ot:ottTaxonName": "Alternariaster helianthi"}, "Tl1086654": {"^ot:originalLabel": "Subplenodomus drobnjacensis", "^ot:ottId": 256244, "^ot:ottTaxonName": "Subplenodomus drobnjacensis"}, "Tl1086655": {"^ot:originalLabel": "Alternariaster helianthi CBS 199.86", "^ot:ottId": 4081336, "^ot:ottTaxonName": "Alternariaster helianthi"}, "Tl1086656": {"^ot:originalLabel": "Plenodomus tracheiphilus", "^ot:ottId": 877829, "^ot:ottTaxonName": "Plenodomus tracheiphilus"}, "Tl1086657": {"^ot:originalLabel": "Paraleptosphaeria dryadis", "^ot:ottId": 309134, "^ot:ottTaxonName": "Paraleptosphaeria dryadis"}, "Tl1086658": {"^ot:originalLabel": "Pyrenochaetopsis pratorum", "^ot:ottId": 836018, "^ot:ottTaxonName": "Pyrenochaetopsis pratorum"}, "Tl1086659": {"^ot:originalLabel": "Coniothyrium multiporum", "^ot:ottId": 820571, "^ot:ottTaxonName": "Coniothyrium multiporum"}, "Tl1086660": {"^ot:originalLabel": "Plenodomus influorescens", "^ot:ottId": 897678, "^ot:ottTaxonName": "Plenodomus influorescens"}, "Tl1086661": {"^ot:originalLabel": "Paraleptosphaeria praetermissa", "^ot:ottId": 707005, "^ot:ottTaxonName": "Paraleptosphaeria praetermissa"}, "Tl1086662": {"^ot:originalLabel": "Coniothyrium telephii CBS 188.71", "^ot:ottId": 948561, "^ot:ottTaxonName": "Coniothyrium telephii"}, "Tl1086663": {"^ot:originalLabel": "Leptosphaeria macrocapsa", "^ot:ottId": 877833, "^ot:ottTaxonName": "Leptosphaeria macrocapsa"}, "Tl1086664": {"^ot:originalLabel": "Subplenodomus violicola", "^ot:ottId": 582280, "^ot:ottTaxonName": "Subplenodomus violicola"}, "Tl1086665": {"^ot:originalLabel": "Alternariaster helianthi CBS 119672", "^ot:ottId": 4081336, "^ot:ottTaxonName": "Alternariaster helianthi"}, "Tl1086666": {"^ot:originalLabel": "Leptosphaeria slovacica", "^ot:ottId": 707036, "^ot:ottTaxonName": "Leptosphaeria slovacica", "^ot:taxonLink": {"@tb:identifier.taxon": 618210, "@tb:identifier.taxonVariant": 827574, "@ubio": "3100729"}}, "Tl1086667": {"^ot:originalLabel": "Pyrenochaeta nobilis", "^ot:ottId": 1027791, "^ot:ottTaxonName": "Pyrenochaeta nobilis", "^ot:taxonLink": {"@tb:identifier.taxon": 42400, "@tb:identifier.taxonVariant": 98871, "@ubio": "3144002", "@uniprot": "390895"}}, "Tl1086668": {"^ot:originalLabel": "Leptosphaeria etheridgei", "^ot:ottId": 231059, "^ot:ottTaxonName": "Leptosphaeria etheridgei"}, "Tl1086669": {"^ot:originalLabel": "Subplenodomus apiicola", "^ot:ottId": 568031, "^ot:ottTaxonName": "Subplenodomus apiicola"}, "Tl1086670": {"^ot:originalLabel": "Pyrenochaetopsis leptospora", "^ot:ottId": 1070573, "^ot:ottTaxonName": "Pyrenochaetopsis leptospora"}, "Tl1086671": {"^ot:originalLabel": "Plenodomus confertus", "^ot:ottId": 833457, "^ot:ottTaxonName": "Plenodomus confertus"}, "Tl1086672": {"^ot:originalLabel": "Plenodomus biglobosus", "^ot:ottId": 962931, "^ot:ottTaxonName": "Plenodomus biglobosus"}, "Tl1086673": {"^ot:originalLabel": "Coniothyrium glycines", "^ot:ottId": 1002127, "^ot:ottTaxonName": "Coniothyrium glycines"}, "Tl1086674": {"^ot:originalLabel": "Leptosphaeria sydowii", "^ot:ottId": 551014, "^ot:ottTaxonName": "Leptosphaeria sydowii"}, "Tl1086675": {"^ot:originalLabel": "Plenodomus fallaciosa", "^ot:ottId": 230093, "^ot:ottTaxonName": "Plenodomus fallaciosus"}}}}, "treesById": {"Tb21070": {"@label": "Alternariaster ITS LSU", "@otus": "Tls30804", "^ot:treeElementOrder": ["Tr63300"], "^skos:historyNote": "Mapped from TreeBASE schema using org.cipres.treebase.domain.nexus.nexml.NexmlTreeBlockWriter@392d6cbf $Rev: 1040 $", "treeById": {"Tr63300": {"@label": "Figure 1. Bayesian 50 % majority rule consensus tree based on the ITS and LSU sequences of 61 strains. The Bayesian posterior probabilities (PP) of 0.95 and above are given at the nodes. Thickened lines indicate a PP of 1.0. The tree was rooted using Phoma herbarum (CBS 615.75).", "@xsi:type": "nex:FloatTree", "^ot:branchLengthDescription": "", "^ot:branchLengthMode": "ot:undefined", "^ot:branchLengthTimeUnit": "Myr", "^ot:curatedType": "", "^ot:inGroupClade": "Tn10069768", "^ot:nodeLabelMode": "", "^ot:nodeLabelTimeUnit": "", "^ot:outGroupEdge": "", "^ot:rootNodeId": "Tr63300_ROOT", "^ot:specifiedRoot": "Tr63300_ROOT", "^ot:tag": [], "^ot:unrootedTree": false, "^tb:kind.tree": "Species Tree", "^tb:ntax.tree": 61, "^tb:quality.tree": "Unrated", "^tb:type.tree": "Consensus", "edgeBySourceId": {"Tn10069683": {"edge20614": {"@length": 0.04031283763352983, "@source": "Tn10069683", "@target": "Tn10069707"}, "edge20624": {"@length": 0.01561149318063872, "@source": "Tn10069683", "@target": "Tn10069784"}}, "Tn10069684": {"edge20668": {"@length": 0.01990848726814326, "@source": "Tn10069684", "@target": "Tn10069682"}, "edge20670": {"@length": 0.01688907108443389, "@source": "Tn10069684", "@target": "Tn10069709"}}, "Tn10069685": {"edge20690": {"@length": 0.01846154092777197, "@source": "Tn10069685", "@target": "Tn10069770"}, "edge20708": {"@length": 0.06508456383025747, "@source": "Tn10069685", "@target": "Tn10069731"}}, "Tn10069686": {"edge20576": {"@length": 0.04537653253951396, "@source": "Tn10069686", "@target": "Tn10069767"}, "edge20586": {"@length": 0.06570406866913629, "@source": "Tn10069686", "@target": "Tn10069786"}}, "Tn10069690": {"edge20570": {"@length": 0.01262795833516581, "@source": "Tn10069690", "@target": "Tn10069738"}, "edge20630": {"@length": 0.03408461992719594, "@source": "Tn10069690", "@target": "Tn10069701"}}, "Tn10069692": {"edge20620": {"@length": 0.001984253614412614, "@source": "Tn10069692", "@target": "Tn10069771"}, "edge20622": {"@length": 0.001125387167779271, "@source": "Tn10069692", "@target": "Tn10069769"}}, "Tn10069695": {"edge20538": {"@length": 0.01796259477672792, "@source": "Tn10069695", "@target": "Tn10069795"}, "edge20640": {"@length": 0.005964697750505388, "@source": "Tn10069695", "@target": "Tn10069776"}}, "Tn10069697": {"edge20680": {"@length": 0.01172909917271027, "@source": "Tn10069697", "@target": "Tn10069772"}, "edge20686": {"@length": 0.0183855859156567, "@source": "Tn10069697", "@target": "Tn10069792"}}, "Tn10069699": {"edge20574": {"@length": 0.02222501868900586, "@source": "Tn10069699", "@target": "Tn10069686"}, "edge20588": {"@length": 0.01302906907916317, "@source": "Tn10069699", "@target": "Tn10069782"}}, "Tn10069700": {"edge20518": {"@length": 0.02444824054424963, "@source": "Tn10069700", "@target": "Tn10069721"}, "edge20524": {"@length": 0.04506981444855203, "@source": "Tn10069700", "@target": "Tn10069765"}, "edge20526": {"@length": 0.1132994988176404, "@source": "Tn10069700", "@target": "Tn10069757"}}, "Tn10069702": {"edge20694": {"@length": 0.001038013599450664, "@source": "Tn10069702", "@target": "Tn10069713"}, "edge20696": {"@length": 0.005248615273525732, "@source": "Tn10069702", "@target": "Tn10069780"}}, "Tn10069703": {"edge20536": {"@length": 0.01434196650473625, "@source": "Tn10069703", "@target": "Tn10069695"}, "edge20674": {"@length": 0.01508580116392663, "@source": "Tn10069703", "@target": "Tn10069759"}}, "Tn10069704": {"edge20544": {"@length": 0.01551754995022629, "@source": "Tn10069704", "@target": "Tn10069794"}, "edge20560": {"@length": 0.02199949519196836, "@source": "Tn10069704", "@target": "Tn10069752"}}, "Tn10069706": {"edge20718": {"@length": 0.01222822731917208, "@source": "Tn10069706", "@target": "Tn10069783"}, "edge20732": {"@length": 0.02397240437074944, "@source": "Tn10069706", "@target": "Tn10069736"}}, "Tn10069707": {"edge20616": {"@length": 0.08677708040507044, "@source": "Tn10069707", "@target": "Tn10069760"}, "edge20618": {"@length": 0.04910209820818771, "@source": "Tn10069707", "@target": "Tn10069692"}}, "Tn10069714": {"edge20660": {"@length": 0.008837232166847547, "@source": "Tn10069714", "@target": "Tn10069715"}, "edge20666": {"@length": 0.01737257271456767, "@source": "Tn10069714", "@target": "Tn10069684"}}, "Tn10069715": {"edge20662": {"@length": 0.007089864991863757, "@source": "Tn10069715", "@target": "Tn10069751"}, "edge20664": {"@length": 0.01829944019354434, "@source": "Tn10069715", "@target": "Tn10069705"}}, "Tn10069718": {"edge20612": {"@length": 0.01553056525232462, "@source": "Tn10069718", "@target": "Tn10069683"}, "edge20626": {"@length": 0.005774382400661991, "@source": "Tn10069718", "@target": "Tn10069749"}}, "Tn10069719": {"edge20700": {"@length": 0.02549134541628924, "@source": "Tn10069719", "@target": "Tn10069773"}, "edge20706": {"@length": 0.01275368396810992, "@source": "Tn10069719", "@target": "Tn10069744"}}, "Tn10069721": {"edge20520": {"@length": 0.0926917465673036, "@source": "Tn10069721", "@target": "Tn10069750"}, "edge20522": {"@length": 0.1296355687812495, "@source": "Tn10069721", "@target": "Tn10069693"}}, "Tn10069722": {"edge20648": {"@length": 0.0349576774879861, "@source": "Tn10069722", "@target": "Tn10069739"}, "edge20650": {"@length": 0.0568152882004568, "@source": "Tn10069722", "@target": "Tn10069755"}}, "Tn10069723": {"edge20600": {"@length": 0.04469023643969403, "@source": "Tn10069723", "@target": "Tn10069741"}, "edge20610": {"@length": 0.008131212189751939, "@source": "Tn10069723", "@target": "Tn10069718"}}, "Tn10069727": {"edge20728": {"@length": 0.005627965658501851, "@source": "Tn10069727", "@target": "Tn10069689"}, "edge20730": {"@length": 0.01802875014999296, "@source": "Tn10069727", "@target": "Tn10069788"}}, "Tn10069729": {"edge20594": {"@length": 0.02955844987431356, "@source": "Tn10069729", "@target": "Tn10069733"}, "edge20596": {"@length": 0.05334669358574614, "@source": "Tn10069729", "@target": "Tn10069756"}}, "Tn10069730": {"edge20580": {"@length": 0.0105190704946894, "@source": "Tn10069730", "@target": "Tn10069737"}, "edge20582": {"@length": 0.002003329341120423, "@source": "Tn10069730", "@target": "Tn10069735"}}, "Tn10069736": {"edge20734": {"@length": 0.04253000769054553, "@source": "Tn10069736", "@target": "Tn10069687"}, "edge20736": {"@length": 0.02903237383612264, "@source": "Tn10069736", "@target": "Tn10069790"}}, "Tn10069738": {"edge20572": {"@length": 0.0148415076560691, "@source": "Tn10069738", "@target": "Tn10069699"}, "edge20598": {"@length": 0.009271392693823464, "@source": "Tn10069738", "@target": "Tn10069723"}, "edge20628": {"@length": 0.02945506836758752, "@source": "Tn10069738", "@target": "Tn10069766"}}, "Tn10069741": {"edge20602": {"@length": 0.004025642306481371, "@source": "Tn10069741", "@target": "Tn10069774"}, "edge20608": {"@length": 0.008847842718207608, "@source": "Tn10069741", "@target": "Tn10069696"}}, "Tn10069748": {"edge20534": {"@length": 0.01914797149055041, "@source": "Tn10069748", "@target": "Tn10069703"}, "edge20716": {"@length": 0.06317748490089911, "@source": "Tn10069748", "@target": "Tn10069706"}}, "Tn10069752": {"edge20562": {"@length": 0.0009860772197085928, "@source": "Tn10069752", "@target": "Tn10069726"}, "edge20564": {"@length": 0.000990301971896652, "@source": "Tn10069752", "@target": "Tn10069746"}}, "Tn10069754": {"edge20722": {"@length": 0.01882140831647982, "@source": "Tn10069754", "@target": "Tn10069732"}, "edge20724": {"@length": 0.09739970045950433, "@source": "Tn10069754", "@target": "Tn10069747"}}, "Tn10069757": {"edge20528": {"@length": 0.09176478620448275, "@source": "Tn10069757", "@target": "Tn10069711"}, "edge20530": {"@length": 0.131001158190341, "@source": "Tn10069757", "@target": "Tn10069753"}}, "Tn10069758": {"edge20678": {"@length": 0.1866767903706997, "@source": "Tn10069758", "@target": "Tn10069697"}, "edge20712": {"@length": 0.03989000642249861, "@source": "Tn10069758", "@target": "Tn10069698"}}, "Tn10069759": {"edge20676": {"@length": 0.02083178293383969, "@source": "Tn10069759", "@target": "Tn10069758"}, "edge20714": {"@length": 0.04002782831972942, "@source": "Tn10069759", "@target": "Tn10069681"}}, "Tn10069763": {"edge20542": {"@length": 0.0802304914451551, "@source": "Tn10069763", "@target": "Tn10069704"}, "edge20566": {"@length": 0.01294720199700264, "@source": "Tn10069763", "@target": "Tn10069793"}}, "Tn10069764": {"edge20644": {"@length": 0.008323346142053245, "@source": "Tn10069764", "@target": "Tn10069789"}, "edge20654": {"@length": 0.01652972290477021, "@source": "Tn10069764", "@target": "Tn10069688"}}, "Tn10069767": {"edge20578": {"@length": 0.01248312810873328, "@source": "Tn10069767", "@target": "Tn10069730"}, "edge20584": {"@length": 0.04186545608559942, "@source": "Tn10069767", "@target": "Tn10069762"}}, "Tn10069768": {"edge20516": {"@length": 0.04566677517490647, "@source": "Tn10069768", "@target": "Tn10069700"}, "edge20532": {"@length": 0.02371316624834872, "@source": "Tn10069768", "@target": "Tn10069748"}}, "Tn10069770": {"edge20692": {"@length": 0.004761652095606304, "@source": "Tn10069770", "@target": "Tn10069702"}, "edge20698": {"@length": 0.0117565215485117, "@source": "Tn10069770", "@target": "Tn10069719"}}, "Tn10069772": {"edge20682": {"@length": 0.005910974282790398, "@source": "Tn10069772", "@target": "Tn10069779"}, "edge20684": {"@length": 0.02420776147724151, "@source": "Tn10069772", "@target": "Tn10069720"}}, "Tn10069773": {"edge20702": {"@length": 0.0009727788489168126, "@source": "Tn10069773", "@target": "Tn10069742"}, "edge20704": {"@length": 0.0009718060032910534, "@source": "Tn10069773", "@target": "Tn10069745"}}, "Tn10069774": {"edge20604": {"@length": 0.007228266507906175, "@source": "Tn10069774", "@target": "Tn10069781"}, "edge20606": {"@length": 0.003232978795805114, "@source": "Tn10069774", "@target": "Tn10069694"}}, "Tn10069775": {"edge20658": {"@length": 0.01191179381169209, "@source": "Tn10069775", "@target": "Tn10069714"}, "edge20672": {"@length": 0.03816180130805124, "@source": "Tn10069775", "@target": "Tn10069716"}}, "Tn10069776": {"edge20642": {"@length": 0.01209041120520837, "@source": "Tn10069776", "@target": "Tn10069764"}, "edge20656": {"@length": 0.01403040560635566, "@source": "Tn10069776", "@target": "Tn10069775"}}, "Tn10069777": {"edge20636": {"@length": 0.03979874066687066, "@source": "Tn10069777", "@target": "Tn10069712"}, "edge20638": {"@length": 0.01411104319720195, "@source": "Tn10069777", "@target": "Tn10069725"}}, "Tn10069782": {"edge20590": {"@length": 0.03376518141615344, "@source": "Tn10069782", "@target": "Tn10069761"}, "edge20592": {"@length": 0.02102705883385213, "@source": "Tn10069782", "@target": "Tn10069729"}}, "Tn10069783": {"edge20720": {"@length": 0.01830398856094344, "@source": "Tn10069783", "@target": "Tn10069754"}, "edge20726": {"@length": 0.03891575840531292, "@source": "Tn10069783", "@target": "Tn10069727"}}, "Tn10069787": {"edge20550": {"@length": 0.0009621739093010361, "@source": "Tn10069787", "@target": "Tn10069740"}, "edge20552": {"@length": 0.0009725919275675877, "@source": "Tn10069787", "@target": "Tn10069710"}, "edge20554": {"@length": 0.0009825666389191938, "@source": "Tn10069787", "@target": "Tn10069724"}, "edge20556": {"@length": 0.0009920610965999158, "@source": "Tn10069787", "@target": "Tn10069717"}, "edge20558": {"@length": 0.000937202201194033, "@source": "Tn10069787", "@target": "Tn10069691"}}, "Tn10069789": {"edge20646": {"@length": 0.01173401988131029, "@source": "Tn10069789", "@target": "Tn10069722"}, "edge20652": {"@length": 0.03142492299610618, "@source": "Tn10069789", "@target": "Tn10069791"}}, "Tn10069790": {"edge20738": {"@length": 0.01849538061275938, "@source": "Tn10069790", "@target": "Tn10069743"}, "edge20740": {"@length": 0.01046273259467152, "@source": "Tn10069790", "@target": "Tn10069708"}}, "Tn10069792": {"edge20688": {"@length": 0.008537152679134179, "@source": "Tn10069792", "@target": "Tn10069685"}, "edge20710": {"@length": 0.02631727218196282, "@source": "Tn10069792", "@target": "Tn10069728"}}, "Tn10069793": {"edge20568": {"@length": 0.009337928124651736, "@source": "Tn10069793", "@target": "Tn10069690"}, "edge20632": {"@length": 0.1129732073532654, "@source": "Tn10069793", "@target": "Tn10069785"}}, "Tn10069794": {"edge20546": {"@length": 0.001681900185205611, "@source": "Tn10069794", "@target": "Tn10069778"}, "edge20548": {"@length": 0.002240610130050979, "@source": "Tn10069794", "@target": "Tn10069787"}}, "Tn10069795": {"edge20540": {"@length": 0.02970316638024745, "@source": "Tn10069795", "@target": "Tn10069763"}, "edge20634": {"@length": 0.07290051802620959, "@source": "Tn10069795", "@target": "Tn10069777"}}, "Tr63300_ROOT": {"Tr63300_ROOT_EDGE": {"@source": "Tr63300_ROOT", "@target": "Tn10069768"}, "edge20514": {"@length": 0.2881621078553296, "@source": "Tr63300_ROOT", "@target": "Tn10069734"}}}, "nodeById": {"Tn10069681": {"@otu": "Tl1086668"}, "Tn10069682": {"@otu": "Tl1086622"}, "Tn10069683": {"@label": "0.962"}, "Tn10069684": {"@label": "1.000"}, "Tn10069685": {"@label": "0.633"}, "Tn10069686": {"@label": "1.000"}, "Tn10069687": {"@otu": "Tl1086659"}, "Tn10069688": {"@otu": "Tl1086664"}, "Tn10069689": {"@otu": "Tl1086621"}, "Tn10069690": {"@label": "0.707"}, "Tn10069691": {"@otu": "Tl1086655", "^ot:isTaxonExemplar": false}, "Tn10069692": {"@label": "1.000"}, "Tn10069693": {"@otu": "Tl1086619"}, "Tn10069694": {"@otu": "Tl1086634"}, "Tn10069695": {"@label": "0.874"}, "Tn10069696": {"@otu": "Tl1086635"}, "Tn10069697": {"@label": "1.000"}, "Tn10069698": {"@otu": "Tl1086623"}, "Tn10069699": {"@label": "0.976"}, "Tn10069700": {"@label": "1.000"}, "Tn10069701": {"@otu": "Tl1086671"}, "Tn10069702": {"@label": "0.921"}, "Tn10069703": {"@label": "0.956"}, "Tn10069704": {"@label": "1.000"}, "Tn10069705": {"@otu": "Tl1086661"}, "Tn10069706": {"@label": "1.000"}, "Tn10069707": {"@label": "1.000"}, "Tn10069708": {"@otu": "Tl1086662", "^ot:isTaxonExemplar": false}, "Tn10069709": {"@otu": "Tl1086633"}, "Tn10069710": {"@otu": "Tl1086648", "^ot:isTaxonExemplar": false}, "Tn10069711": {"@otu": "Tl1086670"}, "Tn10069712": {"@otu": "Tl1086625"}, "Tn10069713": {"@otu": "Tl1086645"}, "Tn10069714": {"@label": "1.000"}, "Tn10069715": {"@label": "0.988"}, "Tn10069716": {"@otu": "Tl1086637"}, "Tn10069717": {"@otu": "Tl1086644", "^ot:isTaxonExemplar": false}, "Tn10069718": {"@label": "0.635"}, "Tn10069719": {"@label": "1.000"}, "Tn10069720": {"@otu": "Tl1086629"}, "Tn10069721": {"@label": "0.968"}, "Tn10069722": {"@label": "0.693"}, "Tn10069723": {"@label": "0.726"}, "Tn10069724": {"@otu": "Tl1086653", "^ot:isTaxonExemplar": false}, "Tn10069725": {"@otu": "Tl1086627"}, "Tn10069726": {"@otu": "Tl1086652", "^ot:isTaxonExemplar": true}, "Tn10069727": {"@label": "1.000"}, "Tn10069728": {"@otu": "Tl1086666"}, "Tn10069729": {"@label": "0.983"}, "Tn10069730": {"@label": "0.997"}, "Tn10069731": {"@otu": "Tl1086632"}, "Tn10069732": {"@otu": "Tl1086647"}, "Tn10069733": {"@otu": "Tl1086660"}, "Tn10069734": {"@otu": "Tl1086639"}, "Tn10069735": {"@otu": "Tl1086675"}, "Tn10069736": {"@label": "0.988"}, "Tn10069737": {"@otu": "Tl1086651"}, "Tn10069738": {"@label": "0.965"}, "Tn10069739": {"@otu": "Tl1086669"}, "Tn10069740": {"@otu": "Tl1086646", "^ot:isTaxonExemplar": false}, "Tn10069741": {"@label": "1.000"}, "Tn10069742": {"@otu": "Tl1086624"}, "Tn10069743": {"@otu": "Tl1086649", "^ot:isTaxonExemplar": true}, "Tn10069744": {"@otu": "Tl1086674"}, "Tn10069745": {"@otu": "Tl1086663"}, "Tn10069746": {"@otu": "Tl1086630", "^ot:isTaxonExemplar": false}, "Tn10069747": {"@otu": "Tl1086650"}, "Tn10069748": {"@label": "0.818"}, "Tn10069749": {"@otu": "Tl1086643"}, "Tn10069750": {"@otu": "Tl1086615"}, "Tn10069751": {"@otu": "Tl1086657"}, "Tn10069752": {"@label": "1.000"}, "Tn10069753": {"@otu": "Tl1086658"}, "Tn10069754": {"@label": "0.831"}, "Tn10069755": {"@otu": "Tl1086641"}, "Tn10069756": {"@otu": "Tl1086618"}, "Tn10069757": {"@label": "1.000"}, "Tn10069758": {"@label": "0.941"}, "Tn10069759": {"@label": "0.996"}, "Tn10069760": {"@otu": "Tl1086640"}, "Tn10069761": {"@otu": "Tl1086642"}, "Tn10069762": {"@otu": "Tl1086638"}, "Tn10069763": {"@label": "0.983"}, "Tn10069764": {"@label": "0.985"}, "Tn10069765": {"@otu": "Tl1086667"}, "Tn10069766": {"@otu": "Tl1086628"}, "Tn10069767": {"@label": "1.000"}, "Tn10069768": {}, "Tn10069769": {"@otu": "Tl1086631"}, "Tn10069770": {"@label": "1.000"}, "Tn10069771": {"@otu": "Tl1086656"}, "Tn10069772": {"@label": "0.858"}, "Tn10069773": {"@label": "1.000"}, "Tn10069774": {"@label": "0.522"}, "Tn10069775": {"@label": "0.999"}, "Tn10069776": {"@label": "0.641"}, "Tn10069777": {"@label": "1.000"}, "Tn10069778": {"@otu": "Tl1086665", "^ot:isTaxonExemplar": true}, "Tn10069779": {"@otu": "Tl1086616"}, "Tn10069780": {"@otu": "Tl1086636"}, "Tn10069781": {"@otu": "Tl1086672"}, "Tn10069782": {"@label": "0.809"}, "Tn10069783": {"@label": "0.752"}, "Tn10069784": {"@otu": "Tl1086617"}, "Tn10069785": {"@otu": "Tl1086626"}, "Tn10069786": {"@otu": "Tl1086620"}, "Tn10069787": {"@label": "0.506"}, "Tn10069788": {"@otu": "Tl1086673"}, "Tn10069789": {"@label": "0.755"}, "Tn10069790": {"@label": "1.000"}, "Tn10069791": {"@otu": "Tl1086654"}, "Tn10069792": {"@label": "0.953"}, "Tn10069793": {"@label": "0.925"}, "Tn10069794": {"@label": "1.000"}, "Tn10069795": {"@label": "0.957"}, "Tr63300_ROOT": {"@root": true}}}}}}}}, "branch2sha": {"master": "c33806c9ee11db205ee8c02a42e31b1c3128e299"}, "commentHTML": "", "duplicateStudyIDs": [], "shardName": "phylesystem-1", "versionHistory": [{"id": "6e67238865bcdcf423f89d3d1a2befd4108aadc8", "author_name": "Karen Cranston", "author_email": "karen.cranston@gmail.com", "date": "Mon, 1 Aug 2016 19:37:05 +0000", "date_ISO_8601": "2016-08-01 19:37:05 +0000", "relative_date": "10 years ago", "message_subject": "confirm root", "message_body": "(Update document 'ot_389' via OpenTree API)"}, {"id": "e82e24dfeb90cb883d82083733004f6d34349d9c", "author_name": "Romina Gazis", "author_email": "gazisromina@gmail.com", "date": "Tue, 1 Sep 2015 18:27:01 +0000", "date_ISO_8601": "2015-09-01 18:27:01 +0000", "relative_date": "11 years ago", "message_subject": "Update Study #ot_389 via OpenTree API"}, {"id": "933b294e98ff7d2fcc1d145e2ffedfd770963c02", "author_name": "Romina Gazis", "author_email": "gazisromina@gmail.com", "date": "Tue, 1 Sep 2015 18:25:05 +0000", "date_ISO_8601": "2015-09-01 18:25:05 +0000", "relative_date": "11 years ago", "message_subject": "Update Study #ot_389 via OpenTree API"}, {"id": "2066bfa67ae066020744a7713c7eb4ccbfb9df39", "author_name": "Romina Gazis", "author_email": "gazisromina@gmail.com", "date": "Tue, 1 Sep 2015 18:23:25 +0000", "date_ISO_8601": "2015-09-01 18:23:25 +0000", "relative_date": "11 years ago", "message_subject": "Update Study #ot_389 via OpenTree API"}, {"id": "663f065e2eb32cbfca158800dc32b83eefab076e", "author_name": "Romina Gazis", "author_email": "gazisromina@gmail.com", "date": "Tue, 1 Sep 2015 18:22:20 +0000", "date_ISO_8601": "2015-09-01 18:22:20 +0000", "relative_date": "11 years ago", "message_subject": "Update Study #ot_389 via OpenTree API"}]}