pythonVersion
2.7.9
pythonImplementation
CPython
false
All life
^(Haptophyta Prymnesiophyceae-)
MMETSP075\d
Dinophyta Dinophyceae-
Cryptophyta Cryptophyceae-
Ochrophyta Pelagophyceae-
Ochrophyta Dictyochophyceae-
Ochrophyta\s[A-Z][a-z]+-
Bicosoecida [A-Z][a-z]+-
Bacillariophyta [A-Z][a-z]+-
false
Source data for tree(s) 'tree1'
tree1
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otu116
otu137
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otu2
otu28
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^ot:comment
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^ot:bootstrapValues
^ot:ottId
tree1
Karen Cranston
Yan Wong
ot_767
Fabien Burki, Maia Kaplan, Denis V. Tikhonenkov, Vasily Zlatogursky, Bui Quang Minh, Liudmila V. Radaykina, Alexey Smirnov, Alexander P. Mylnikov, Patrick J. Keeling, 2016, 'Untangling the early diversification of eukaryotes: a phylogenomic study of the evolutionary origins of Centrohelida, Haptophyta and Cryptista', Proceedings of the Royal Society B: Biological Sciences, vol. 283, no. 1823, p. 20152802
2016
Acanthamoeba castellanii
120245
Acanthamoeba castellanii
Phycomyces blakesleeanus
735973
Phycomyces blakesleeanus
Chromera velia
215573
Chromera velia
Colpodella
737183
Colpodella
Voromonas pontica GG
537591
Voromonas pontica
Vitrella brassicaformis
818325
Vitrella brassicaformis
Dinophyta Dinophyceae-Amphidinium carterae
746949
Amphidinium carterae
Dinophyta Dinophyceae-Karenia brevis
93910
Karenia brevis
Noctiluca scintillans
746947
Noctiluca scintillans
Hematodinium sp
845949
Hematodinium
Perkinsus marinus
438694
Perkinsus marinus
Ciliophora Colopdea Platyophryidae Platyophrya macrostoma WH
756780
Platyophrya macrostoma
Branchiostoma floridae
176532
Branchiostoma floridae
Paramecium tetraurelia
568130
Paramecium tetraurelia
Tetrahymena thermophila
180195
Tetrahymena thermophila
Ciliophora Litostomatea Litonotidae Litonotus pictus P1
642971
Litonotus pictus
Euplotes
231098
Euplotes
Ciliophora Spirotrichea Strombidiidae Strombidium inclinatum S3
509918
Strombidium inclinatum
Sterkiella histriomuscorum
141076
Sterkiella histriomuscorum
Protocruzia adherens Boccale
Ciliophora Spirotrichea Protocruziidae Protocruzia adherens Boccale
Telonema
4738974
Telonema
Emiliania huxleyi
695761
Emiliania huxleyi
Haptophyta Prymnesiophyceae-Isochrysis galbana
955647
Isochrysis galbana
Danio rerio
1005914
Danio rerio
Haptophyta Coccolithophyceae-Scyphosphaera apsteinii
978488
Scyphosphaera apsteinii
Haptophyta Prymnesiophyceae-Calcidiscus leptoporus
507210
Calcidiscus leptoporus
Haptophyta Prymnesiophyceae-Pleurochrysis carterae
907495
Pleurochrysis carterae
Haptophyta Prymnesiophyceae-Chrysochromulina brevifilum
226269
Haptolina brevifila
Haptophyta Prymnesiophyceae-Chrysochromulina polylepis
698605
Prymnesium polylepis
Haptophyta Prymnesiophyceae-Prymnesium parvum
937580
Prymnesium parvum
Haptophyta Prymnesiophyceae-Phaeocystis antarctica
215713
Phaeocystis antarctica
Haptophyta Prymnesiophyceae-Phaeocystis sp
215712
Phaeocystis
Haptophyta Prymnesiophyceae-Chrysoculter rhomboideus
4023372
Chrysoculter rhomboideus
Pavlovales sp
488592
Pavlovales (merged with Pavlova)
Homo sapiens
770315
Homo sapiens
HF20
901748
Acanthocystis
HF7
631183
Choanocystis
Raineriophrys erinaceoides
901743
Raineriophrys erinaceoides
Raphidiophrys ambigua
607131
Raphidiophrys ambigua
Raphidiophrys heterophryoidea
5923989
Raphidiophrys heterophryoidea
Bodo saltans
722598
Bodo saltans
Kinetoplastea-Neobodo designis
606323
Neobodo designis
Euglenozoa Euglenida-Eutreptiella gymnastica
Naegleria gruberi
641873
Naegleria gruberi
Sawyeria marylandensis
801124
Sawyeria marylandensis
Daphnia pulex
59086
Daphnia pulex
Percolomonas cosmopolitusMMETSP0758
Percolomonas cosmopolitusMMETSP0759
Tsukubamonas globosa
4739013
Tsukubamonas globosa
Jakoba
837684
Jakoba
Reclinomonas americana
429200
Reclinomonas americana
Seculamonas ecuadoriensis
592948
Seculamonas ecuadoriensis
Malawimonas
935422
Malawimonas
Collodictyon sp
4738989
Collodictyon
Dictyostelium discoideum
160850
Dictyostelium discoideum
Dictyostelium purpureum
999663
Dictyostelium purpureum
Lottia gigantea
840650
Lottia gigantea
Polysphondylium pallidum
591694
Polysphondylium pallidum
Nematostella vectensis
938118
Nematostella vectensis
Monosiga brevicollis
281703
Monosiga brevicollis
Arabidopsis
309275
Arabidopsis
Populus trichocarpa
8861
Populus trichocarpa
Amastigomonas sp
Mimulus guttatus
596473
Erythranthe guttata
Brachypodium distachyon
413237
Brachypodium distachyon
Oryza sativa
709894
Oryza sativa
Physcomitrella patens
821359
Physcomitrella patens
Selaginella moellendorffii
799880
Selaginella moellendorffii
Chlamydomonas reinhardtii
33153
Chlamydomonas reinhardtii
Volvox carteri
391120
Volvox carteri
Chlorella vulgaris
804978
Chlorella vulgaris
Coccomyxa sp
Micromonas sp
395943
Micromonas
Thecamonas trahens
418774
Thecamonas trahens
Ostreococcus lucimarinus
851102
Ostreococcus 'lucimarinus'
Cyanophora paradoxa
878960
Cyanophora paradoxa
Gloeochaete witrockiana
142555
Gloeochaete wittrockiana (species in domain Eukaryota)
Cyanoptyche gloeocystis
801157
Cyanoptyche gloeocystis
Cryptophyceae sp
5246159
Cryptophyceae
Cryptophyta Cryptophyceae-Rhodomonas abbreviata
492542
Rhodomonas abbreviata
Cryptophyta Cryptophyceae-Rhodomonas sp
955642
Rhodomonas
Guillardia theta
5247740
Guillardia theta
Cryptophyta Cryptophyceae-Hemiselmis andersenii
824459
Hemiselmis andersenii
Cryptophyta Cryptophyceae-Hemiselmis rufescens
801161
Hemiselmis rufescens
Breviate
Cryptophyta Cryptophyceae-Cryptomonas curvata
852291
Cryptomonas curvata
Cryptophyta Cryptophyceae-Goniomonas pacifica
324268
Goniomonas pacifica
Cryptophyta Cryptophyceae-Goniomonas sp
914449
Goniomonas
Roombia truncata
265799
Roombia truncata
Palpitomonas bilix
4739017
Palpitomonas bilix
Chondrus crispus
878946
Chondrus crispus
Porphyra
726205
Porphyra
Rhodophyta Rhodellophyceae-Rhodella maculata
559589
Rhodella maculata
Rhodophyta Rhodellophyceae-Rhodosorus marinus
668452
Rhodosorus marinus
Compsopogon coeruleus
339611
Compsopogon caeruleus
Batrachochytrium dendrobatidis
858873
Batrachochytrium dendrobatidis
Madagascaria erythrocladoides
Rhodophyta Compsopogonophyceae-Madagascaria erythrocladoides
Porphyridium aerugineum
202890
Porphyridium aerugineum
Porphyridium cruentum
432894
Porphyridium purpureum
Erythrolobus
1097367
Erythrolobus
Cyanidioschyzon merolae
85503
Cyanidioschyzon merolae
Galdieria sulphuraria
369285
Galdieria sulphuraria
Picobiliphyte MS584-11
Astrolonche serrata
4918041
Astrolonche serrata
Elphidium margaritaceum
930595
Elphidium margaritaceum
Reticulomyxa filosa
434296
Reticulomyxa filosa
Cryptococcus neoformans
634633
Cryptococcus neoformans
Gromia sphaerica
721105
Gromia sphaerica
Bigelowiella natans
5260606
Bigelowiella natans
Chlorarachnion reptans
681862
Chlorarachnion reptans
Aurantiochytrium limacinum
945150
Aurantiochytrium limacinum
Labyrinthista Labyrinthulea-Thraustochytrium sp
Schizochytrium aggregatum
712873
Schizochytrium aggregatum
Aplanochytrium
5343355
Aplanochytrium
MAST4
Aureococcus anophageferrens
533286
Aureococcus anophagefferens
Ochrophyta Pelagophyceae-Pelagomonas calceolata
217467
Pelagomonas calceolata
Ustilago maydis
285447
Ustilago maydis
Ochrophyta Pelagophyceae-Aureoumbra lagunensis
533293
Aureoumbra lagunensis
Ochrophyta Dictyochophyceae-Dictyocha speculum
432896
Dictyocha speculum
Ochrophyta Dictyochophyceae-Pseudopedinella elastica
432899
Pseudopedinella elastica
Ochrophyta Dictyochophyceae-Rhizochromulina marina
990996
Rhizochromulina marina
Bacillariophyta Coscinodiscophyceae-Odontella aurita
1019315
Odontella aurita
Bacillariophyta Fragilariophyceae-Asterionellopsis glacialis
790044
Asterionellopsis glacialis
Phaeodactylum tricornutum
1095879
Phaeodactylum tricornutum
Thalassiosira pseudonana
753596
Thalassiosira pseudonana
Ochrophyta Bolidophyceae-Bolidomonas pacifica
96431
Bolidomonas pacifica
Ectocarpus siliculosus
878345
Ectocarpus siliculosus
Neurospora crassa
572462
Neurospora crassa
Ochrophyta Xanthophyceae-Vaucheria litorea
988288
Vaucheria litorea
Ochrophyta Raphidophyceae-Chattonella subsalsa
15569
Chattonella subsalsa
Ochrophyta Raphidophyceae-Heterosigma akashiwo
427257
Heterosigma akashiwo
Ochrophyta Raphidophyceae-Fibrocapsa japonica
358426
Fibrocapsa japonica
Nannochloropsis gaditana
749812
Nannochloropsis gaditana
Ochrophyta Chrysophyceae-Paraphysomonas imperforata
88179
Paraphysomonas imperforata
Ochrophyta Chrysophyceae-Spumella elongata
690126
Spumella elongata
Ochrophyta Synurophyceae-Ochromonas spMMETSP1177
Ochrophyta Synurophyceae-Mallomonas sp
4921711
Mallomonas
Ochrophyta Dictyochophyceae-Pinguiococcus pyrenoidosus
784571
Pinguiococcus pyrenoidosus
Schizosaccharomyces pompe
990004
Schizosaccharomyces pombe
Ochrophyta Pinguiophyceae-Phaeomonas parva
246871
Phaeomonas parva
Phytophthora
775740
Phytophthora
Saprolegnia parasitica
939401
Saprolegnia parasitica
Bicosoecida Bicosoecophyceae-Cafeteria roebergensis
Bicosoecida Bicosoecophyceae-Cafeteria sp
215705
Cafeteria
Blastocystis hominis
316473
Blastocystis hominis
Babesia bovis
826545
Babesia bovis
Plasmodium falciparum
201128
Plasmodium falciparum (merged with Plasmodium)
Toxoplasma gondii
252145
Toxoplasma gondii
Cryptosporidium muris
775243
Cryptosporidium muris
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