{"sha": "6bed60428352c04d00341ad513a8efb9442e4d8a", "data": {"nexml": {"@about": "#study", "@generator": "Open Tree API", "@id": "study", "@nexml2json": "1.2.1", "@nexmljson": "http://purl.org/opentree/nexson", "@version": "0.9", "@xmlns": {"$": "http://www.nexml.org/2009", "nex": "http://www.nexml.org/2009", "ot": "http://purl.org/opentree-terms#", "xhtml": "http://www.w3.org/1999/xhtml/vocab#", "xsd": "http://www.w3.org/2001/XMLSchema#", "xsi": "http://www.w3.org/2001/XMLSchema-instance"}, "^ot:agents": {"agent": [{"@description": "Open Tree NexSON validation", "@id": "peyotl-validator", "@name": "api.opentreeoflife.org/validate", "@url": "https://github.com/OpenTreeOfLife/peyotl", "@version": "0.0.4a", "invocation": {"commandLine": [], "otherProperty": [{"name": "pythonVersion", "value": "2.7.9"}, {"name": "pythonImplementation", "value": "CPython"}]}}, {"@description": "Web-based interface for submitting, editing, and reviewing studies in the Open Tree of Life project.", "@id": "opentree-curation-webapp", "@name": "OpenTree curation webapp", "@url": "https://github.com/OpenTreeOfLife/opentree", "@version": "0.0.0"}]}, "^ot:annotationEvents": {"annotation": [{"@dateCreated": "2016-09-26T20:19:56.379Z", "@description": "Aids for mapping study OTUs to OTT taxa", "@id": "otu-mapping-hints", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "OTU_MAPPING_HINTS", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"autoAcceptExactMatches": false, "searchContext": {"$": "Birds"}, "substitutions": {"substitution": [{"@active": false, "@valid": true, "new": {"$": ""}, "old": {"$": ""}}]}, "useFuzzyMatching": false}, "refersTo": {"@top": {"$": "meta"}}}]}, {"@dateCreated": "2016-09-26T20:19:56.379Z", "@description": "Describes supporting data files for this study", "@id": "supporting-files-metadata", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "SUPPORTING_FILE_INFO", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"@movedToPermanentArchive": false, "files": {"file": [{"@filename": "PASTED.tre", "@size": 2159, "@type": "newick", "@url": "/curator/download/supporting_files.doc.8bdcff2be9b1445e.5041535445442e747265.tre", "description": {"$": "Source data for tree(s) 'tree1'"}, "sourceForTree": [{"$": "tree1"}]}]}}, "refersTo": {"@top": {"$": "meta"}}}]}, {"@dateCreated": "2023-07-12T15:48:52.262Z", "@description": "Describes external namesets merged into this study", "@id": "merged-namesets-metadata", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "MERGED_NAMESET_INFO", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"namesets": {"nameset": []}}, "refersTo": {"@top": {"$": "meta"}}}]}, {"@id": "peyotl-validator-event", "@description": "Open Tree NexSON validation", "@wasAssociatedWithAgentId": "peyotl-validator", "@passedChecks": true, "@preserve": false, "message": [{"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge1", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge1"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge10", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge10"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge102", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge102"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge105", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge105"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge108", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge108"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge109", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge109"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge11", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge11"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge113", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge113"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge114", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge114"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge118", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge118"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge12", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge12"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge121", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge121"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge122", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge122"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge123", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge123"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge126", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge126"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge13", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge13"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge130", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge130"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge131", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge131"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge132", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge132"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge133", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge133"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge134", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge134"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge135", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge135"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge140", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge140"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge145", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge145"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge146", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge146"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge147", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge147"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge148", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge148"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge149", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge149"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge153", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge153"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge156", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge156"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge159", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge159"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge160", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge160"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge161", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge161"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge164", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge164"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge168", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge168"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge17", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge17"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge18", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge18"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge2", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge2"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge22", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge22"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge25", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge25"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge28", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge28"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge29", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge29"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge3", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge3"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge33", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge33"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge36", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge36"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge37", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge37"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge38", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge38"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge4", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge4"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge43", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge43"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge44", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge44"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge45", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge45"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge46", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge46"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge47", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge47"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge48", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge48"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge49", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge49"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge5", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge5"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge54", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge54"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge57", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge57"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge58", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge58"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge6", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge6"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge62", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge62"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge65", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge65"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge66", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge66"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge7", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge7"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge70", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge70"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge71", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge71"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge72", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge72"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge73", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge73"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge74", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge74"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge75", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge75"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge76", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge76"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge77", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge77"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge78", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge78"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge79", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge79"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge8", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge8"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge84", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge84"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge85", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge85"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge9", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge9"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge90", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge90"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge91", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge91"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge92", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge92"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge97", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge97"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge98", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge98"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:posteriorSupport"], "refersTo": {"@top": "trees", "@idref": "edge99", "@treesID": "trees1", "@treeID": "tree1", "@edgeID": "edge99"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:comment"], "refersTo": {"@top": "nexml", "@idref": "study"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:nodeLabelDescription", "^ot:nodeLabelMode", "^ot:nodeLabelTimeUnit", "^ot:reasonsToExcludeFromSynthesis"], "refersTo": {"@top": "trees", "@idref": "tree1", "@treesID": "trees1", "@treeID": "tree1"}, "@severity": "WARNING"}]}]}, "^ot:candidateTreeForSynthesis": ["tree1"], "^ot:comment": "", "^ot:curatorName": ["Joseph W. Brown", "jwaterford"], "^ot:dataDeposit": {"@href": ""}, "^ot:focalClade": 313124, "^ot:focalCladeOTTTaxonName": "Charadriiformes", "^ot:otusElementOrder": ["otus1"], "^ot:studyId": "ot_816", "^ot:studyPublication": {"@href": "http://dx.doi.org/10.1016/j.ympev.2012.03.008"}, "^ot:studyPublicationReference": "Gibson, Rosemary, Allan Baker. 2012. Multiple gene sequences resolve phylogenetic relationships in the shorebird suborder Scolopaci (Aves: Charadriiformes). Molecular Phylogenetics and Evolution 64 (1): 66-72", "^ot:studyYear": 2012, "^ot:tag": [], "^ot:treesElementOrder": ["trees1"], "otusById": {"otus1": {"otuById": {"otu1": {"^ot:originalLabel": "Tringa melanoleuca", "^ot:ottId": 304017, "^ot:ottTaxonName": "Tringa melanoleuca"}, "otu10": {"^ot:originalLabel": "Heteroscelus incanus", "^ot:ottId": 596104, "^ot:ottTaxonName": "Tringa incana"}, "otu11": {"^ot:originalLabel": "Tringa solitaria cinnamomea", "^ot:ottId": 5223316, "^ot:ottTaxonName": "Tringa solitaria cinnamomea"}, "otu12": {"^ot:originalLabel": "Tringa solitaria solitaria", "^ot:ottId": 5223315, "^ot:ottTaxonName": "Tringa solitaria solitaria"}, "otu13": {"^ot:originalLabel": "Tringa ochropus", "^ot:ottId": 165976, "^ot:ottTaxonName": "Tringa ochropus"}, "otu14": {"^ot:originalLabel": "Actitis hypoleucos", "^ot:ottId": 792983, "^ot:ottTaxonName": "Actitis hypoleucos"}, "otu15": {"^ot:originalLabel": "Actitis macularius", "^ot:ottId": 810558, "^ot:ottTaxonName": "Actitis macularia"}, "otu16": {"^ot:originalLabel": "Phalaropus fulicaria", "^ot:ottId": 809003, "^ot:ottTaxonName": "Phalaropus fulicaria"}, "otu17": {"^ot:originalLabel": "Phalaropus lobatus", "^ot:ottId": 57821, "^ot:ottTaxonName": "Phalaropus lobatus"}, "otu18": {"^ot:originalLabel": "Phalaropus tricolor", "^ot:ottId": 214789, "^ot:ottTaxonName": "Phalaropus tricolor"}, "otu19": {"^ot:originalLabel": "Xenus cinereus", "^ot:ottId": 917049, "^ot:ottTaxonName": "Xenus cinereus"}, "otu2": {"^ot:originalLabel": "Tringa nebularia", "^ot:ottId": 917055, "^ot:ottTaxonName": "Tringa nebularia"}, "otu20": {"^ot:originalLabel": "Gallinago delicata", "^ot:ottId": 234669, "^ot:ottTaxonName": "Gallinago delicata"}, "otu21": {"^ot:originalLabel": "Gallinago gallinago", "^ot:ottId": 615378, "^ot:ottTaxonName": "Gallinago gallinago"}, "otu22": {"^ot:originalLabel": "Gallinago nigripennis", "^ot:ottId": 512604, "^ot:ottTaxonName": "Gallinago nigripennis"}, "otu23": {"^ot:originalLabel": "Gallinago paraguaiae", "^ot:ottId": 943096, "^ot:ottTaxonName": "Gallinago paraguaiae"}, "otu24": {"^ot:originalLabel": "Gallinago media", "^ot:ottId": 848007, "^ot:ottTaxonName": "Gallinago media"}, "otu25": {"^ot:originalLabel": "Gallinago stenura", "^ot:ottId": 45306, "^ot:ottTaxonName": "Gallinago stenura"}, "otu26": {"^ot:originalLabel": "Coenocorypha aucklandica", "^ot:ottId": 180482, "^ot:ottTaxonName": "Coenocorypha aucklandica"}, "otu27": {"^ot:originalLabel": "Coenocorypha pusilla", "^ot:ottId": 448964, "^ot:ottTaxonName": "Coenocorypha pusilla"}, "otu28": {"^ot:originalLabel": "Gallinago imperialis", "^ot:ottId": 565611, "^ot:ottTaxonName": "Gallinago imperialis"}, "otu29": {"^ot:originalLabel": "Scolopax minor", "^ot:ottId": 244702, "^ot:ottTaxonName": "Scolopax minor"}, "otu3": {"^ot:originalLabel": "Tringa erythropus", "^ot:ottId": 596861, "^ot:ottTaxonName": "Tringa erythropus"}, "otu30": {"^ot:originalLabel": "Scolopax rusticola", "^ot:ottId": 1010551, "^ot:ottTaxonName": "Scolopax rusticola"}, "otu31": {"^ot:originalLabel": "Limnodromus griseus", "^ot:ottId": 234683, "^ot:ottTaxonName": "Limnodromus griseus"}, "otu32": {"^ot:originalLabel": "Limnodromus scolopaceus", "^ot:ottId": 530284, "^ot:ottTaxonName": "Limnodromus scolopaceus"}, "otu33": {"^ot:originalLabel": "Limnodromus semipalmatus", "^ot:ottId": 565604, "^ot:ottTaxonName": "Limnodromus semipalmatus"}, "otu34": {"^ot:originalLabel": "Calidris pusilla", "^ot:ottId": 1092981, "^ot:ottTaxonName": "Calidris pusilla"}, "otu35": {"^ot:originalLabel": "Calidris mauri", "^ot:ottId": 234671, "^ot:ottTaxonName": "Calidris mauri"}, "otu36": {"^ot:originalLabel": "Calidris melanotos", "^ot:ottId": 57825, "^ot:ottTaxonName": "Calidris melanotos"}, "otu37": {"^ot:originalLabel": "Tryngites subruficollis", "^ot:ottId": 808996, "^ot:ottTaxonName": "Tryngites subruficollis"}, "otu38": {"^ot:originalLabel": "Calidris fuscicollis", "^ot:ottId": 234673, "^ot:ottTaxonName": "Calidris fuscicollis"}, "otu39": {"^ot:originalLabel": "Calidris minutilla", "^ot:ottId": 654822, "^ot:ottTaxonName": "Calidris minutilla"}, "otu4": {"^ot:originalLabel": "Tringa stagnatilis", "^ot:ottId": 1030678, "^ot:ottTaxonName": "Tringa stagnatilis"}, "otu40": {"^ot:originalLabel": "Calidris minuta", "^ot:ottId": 271793, "^ot:ottTaxonName": "Calidris minuta"}, "otu41": {"^ot:originalLabel": "Calidris bairdii", "^ot:ottId": 654826, "^ot:ottTaxonName": "Calidris bairdii"}, "otu42": {"^ot:originalLabel": "Calidris maritima", "^ot:ottId": 855479, "^ot:ottTaxonName": "Calidris maritima"}, "otu43": {"^ot:originalLabel": "Calidris ptilocnemis", "^ot:ottId": 236664, "^ot:ottTaxonName": "Calidris ptilocnemis"}, "otu44": {"^ot:originalLabel": "Calidris alpina", "^ot:ottId": 887705, "^ot:ottTaxonName": "Calidris alpina"}, "otu45": {"^ot:originalLabel": "Calidris alba", "^ot:ottId": 654824, "^ot:ottTaxonName": "Calidris alba"}, "otu46": {"^ot:originalLabel": "Calidris ruficollis", "^ot:ottId": 24121, "^ot:ottTaxonName": "Calidris ruficollis"}, "otu47": {"^ot:originalLabel": "Eurynorhynchus pygmeus", "^ot:ottId": 180487, "^ot:ottTaxonName": "Eurynorhynchus pygmeus"}, "otu48": {"^ot:originalLabel": "Calidris subminuta", "^ot:ottId": 271794, "^ot:ottTaxonName": "Calidris subminuta"}, "otu49": {"^ot:originalLabel": "Calidris temminckii", "^ot:ottId": 149072, "^ot:ottTaxonName": "Calidris temminckii"}, "otu5": {"^ot:originalLabel": "Tringa glareola", "^ot:ottId": 341975, "^ot:ottTaxonName": "Tringa glareola"}, "otu50": {"^ot:originalLabel": "Calidris ferruginea", "^ot:ottId": 236666, "^ot:ottTaxonName": "Calidris ferruginea"}, "otu51": {"^ot:originalLabel": "Calidris himantopus", "^ot:ottId": 633931, "^ot:ottTaxonName": "Calidris himantopus"}, "otu52": {"^ot:originalLabel": "Calidris acuminata", "^ot:ottId": 768489, "^ot:ottTaxonName": "Calidris acuminata"}, "otu53": {"^ot:originalLabel": "Limicola falcinellus", "^ot:ottId": 651066, "^ot:ottTaxonName": "Limicola falcinellus"}, "otu54": {"^ot:originalLabel": "Philomachus pugnax", "^ot:ottId": 1090732, "^ot:ottTaxonName": "Calidris pugnax"}, "otu55": {"^ot:originalLabel": "Aphriza virgata", "^ot:ottId": 6151078, "^ot:ottTaxonName": "Calidris virgata"}, "otu56": {"^ot:originalLabel": "Calidris canutus", "^ot:ottId": 214779, "^ot:ottTaxonName": "Calidris canutus"}, "otu57": {"^ot:originalLabel": "Calidris tenuirostris", "^ot:ottId": 341981, "^ot:ottTaxonName": "Calidris tenuirostris"}, "otu58": {"^ot:originalLabel": "Arenaria interpres", "^ot:ottId": 821753, "^ot:ottTaxonName": "Arenaria interpres"}, "otu59": {"^ot:originalLabel": "Arenaria melanocephala", "^ot:ottId": 654830, "^ot:ottTaxonName": "Arenaria melanocephala"}, "otu6": {"^ot:originalLabel": "Tringa totanus", "^ot:ottId": 917056, "^ot:ottTaxonName": "Tringa totanus"}, "otu60": {"^ot:originalLabel": "Limosa fedoa", "^ot:ottId": 413323, "^ot:ottTaxonName": "Limosa fedoa"}, "otu61": {"^ot:originalLabel": "Limosa haemastica", "^ot:ottId": 413324, "^ot:ottTaxonName": "Limosa haemastica"}, "otu62": {"^ot:originalLabel": "Limosa limosa islandica", "^ot:ottId": 279299, "^ot:ottTaxonName": "Limosa limosa islandica"}, "otu63": {"^ot:originalLabel": "Limosa limosa melanuroides", "^ot:ottId": 763654, "^ot:ottTaxonName": "Limosa limosa melanuroides"}, "otu64": {"^ot:originalLabel": "Limosa lapponica", "^ot:ottId": 304018, "^ot:ottTaxonName": "Limosa lapponica"}, "otu65": {"^ot:originalLabel": "Numenius arquata", "^ot:ottId": 971518, "^ot:ottTaxonName": "Numenius arquata"}, "otu66": {"^ot:originalLabel": "Numenius madagascariensis", "^ot:ottId": 341976, "^ot:ottTaxonName": "Numenius madagascariensis"}, "otu67": {"^ot:originalLabel": "Numenius americanus", "^ot:ottId": 808998, "^ot:ottTaxonName": "Numenius americanus"}, "otu68": {"^ot:originalLabel": "Numenius minutus", "^ot:ottId": 651069, "^ot:ottTaxonName": "Numenius minutus"}, "otu69": {"^ot:originalLabel": "Numenius phaeopus hudsonicus", "^ot:ottId": 1080871, "^ot:ottTaxonName": "Numenius phaeopus"}, "otu7": {"^ot:originalLabel": "Catoptrophorus semipalmatus", "^ot:ottId": 446288, "^ot:ottTaxonName": "Tringa semipalmata"}, "otu70": {"^ot:originalLabel": "Numenius phaeopus variegatus", "^ot:ottId": 821660, "^ot:ottTaxonName": "Numenius phaeopus variegatus"}, "otu71": {"^ot:originalLabel": "Numenius tahitiensis", "^ot:ottId": 425437, "^ot:ottTaxonName": "Numenius tahitiensis"}, "otu72": {"^ot:originalLabel": "Bartramia longicauda", "^ot:ottId": 654835, "^ot:ottTaxonName": "Bartramia longicauda"}, "otu73": {"^ot:originalLabel": "Irediparra gallinacea", "^ot:ottId": 332002, "^ot:ottTaxonName": "Irediparra gallinacea"}, "otu74": {"^ot:originalLabel": "Microparra capensis", "^ot:ottId": 5272, "^ot:ottTaxonName": "Microparra capensis"}, "otu75": {"^ot:originalLabel": "Actophilornis africanus", "^ot:ottId": 977428, "^ot:ottTaxonName": "Actophilornis africanus"}, "otu76": {"^ot:originalLabel": "Hydrophasianus chirurgus", "^ot:ottId": 977453, "^ot:ottTaxonName": "Hydrophasianus chirurgus"}, "otu77": {"^ot:originalLabel": "Jacana jacana", "^ot:ottId": 332005, "^ot:ottTaxonName": "Jacana jacana"}, "otu78": {"^ot:originalLabel": "Rostratula benghalensis", "^ot:ottId": 5276, "^ot:ottTaxonName": "Rostratula benghalensis"}, "otu79": {"^ot:originalLabel": "Rostratula semicollaris", "^ot:ottId": 953621, "^ot:ottTaxonName": "Nycticryphes semicollaris"}, "otu8": {"^ot:originalLabel": "Tringa flavipes", "^ot:ottId": 55408, "^ot:ottTaxonName": "Tringa flavipes"}, "otu80": {"^ot:originalLabel": "Attagis gayi", "^ot:ottId": 427704, "^ot:ottTaxonName": "Attagis gayi"}, "otu81": {"^ot:originalLabel": "Attagis malouinus", "^ot:ottId": 417274, "^ot:ottTaxonName": "Attagis malouinus"}, "otu82": {"^ot:originalLabel": "Thinocorus orbignyianus", "^ot:ottId": 628490, "^ot:ottTaxonName": "Thinocorus orbignyianus"}, "otu83": {"^ot:originalLabel": "Thinocorus rumicivorus", "^ot:ottId": 481916, "^ot:ottTaxonName": "Thinocorus rumicivorus"}, "otu84": {"^ot:originalLabel": "Pedionomus torquatus", "^ot:ottId": 163953, "^ot:ottTaxonName": "Pedionomus torquatus"}, "otu85": {"^ot:originalLabel": "Sterna hirundo", "^ot:ottId": 1057459, "^ot:ottTaxonName": "Sterna hirundo"}, "otu86": {"^ot:originalLabel": "Rynchops niger", "^ot:ottId": 738512, "^ot:ottTaxonName": "Rynchops niger"}, "otu9": {"^ot:originalLabel": "Heteroscelus brevipes", "^ot:ottId": 596102, "^ot:ottTaxonName": "Tringa brevipes"}}}}, "treesById": {"trees1": {"@otus": "otus1", "^ot:treeElementOrder": ["tree1"], "treeById": {"tree1": {"@label": "Fig. 1 (Bayesian MCC)", "@xsi:type": "nex:FloatTree", "^ot:branchLengthDescription": "", "^ot:branchLengthMode": "ot:undefined", "^ot:branchLengthTimeUnit": "", "^ot:curatedType": "Bayesian inference ", "^ot:inGroupClade": "node2", "^ot:nodeLabelDescription": "", "^ot:nodeLabelMode": "ot:posteriorSupport", "^ot:nodeLabelTimeUnit": "", "^ot:outGroupEdge": "", "^ot:reasonsToExcludeFromSynthesis": [], "^ot:rootNodeId": "node1", "^ot:specifiedRoot": "node1", "^ot:tag": [], "^ot:unrootedTree": false, "edgeBySourceId": {"node1": {"edge1": {"@source": "node1", "@target": "node2", "^ot:posteriorSupport": 1}, "edge168": {"@source": "node1", "@target": "node169", "^ot:posteriorSupport": 1}}, "node10": {"edge10": {"@source": "node10", "@target": "node11", "^ot:posteriorSupport": 1}, "edge25": {"@source": "node10", "@target": "node26", "^ot:posteriorSupport": 1}}, "node100": {"edge100": {"@source": "node100", "@target": "node101"}, "edge101": {"@source": "node100", "@target": "node102"}}, "node103": {"edge103": {"@source": "node103", "@target": "node104"}, "edge104": {"@source": "node103", "@target": "node105"}}, "node106": {"edge106": {"@source": "node106", "@target": "node107"}, "edge107": {"@source": "node106", "@target": "node108"}}, "node109": {"edge109": {"@source": "node109", "@target": "node110", "^ot:posteriorSupport": 1}, "edge112": {"@source": "node109", "@target": "node113"}}, "node11": {"edge11": {"@source": "node11", "@target": "node12", "^ot:posteriorSupport": 0.84}, "edge22": {"@source": "node11", "@target": "node23", "^ot:posteriorSupport": 0.86}}, "node110": {"edge110": {"@source": "node110", "@target": "node111"}, "edge111": {"@source": "node110", "@target": "node112"}}, "node114": {"edge114": {"@source": "node114", "@target": "node115", "^ot:posteriorSupport": 0.83}, "edge117": {"@source": "node114", "@target": "node118"}}, "node115": {"edge115": {"@source": "node115", "@target": "node116"}, "edge116": {"@source": "node115", "@target": "node117"}}, "node119": {"edge119": {"@source": "node119", "@target": "node120"}, "edge120": {"@source": "node119", "@target": "node121"}}, "node12": {"edge12": {"@source": "node12", "@target": "node13", "^ot:posteriorSupport": 1}, "edge17": {"@source": "node12", "@target": "node18", "^ot:posteriorSupport": 1}}, "node122": {"edge122": {"@source": "node122", "@target": "node123", "^ot:posteriorSupport": 0.91}, "edge129": {"@source": "node122", "@target": "node130"}}, "node123": {"edge123": {"@source": "node123", "@target": "node124", "^ot:posteriorSupport": 1}, "edge126": {"@source": "node123", "@target": "node127", "^ot:posteriorSupport": 1}}, "node124": {"edge124": {"@source": "node124", "@target": "node125"}, "edge125": {"@source": "node124", "@target": "node126"}}, "node127": {"edge127": {"@source": "node127", "@target": "node128"}, "edge128": {"@source": "node127", "@target": "node129"}}, "node13": {"edge13": {"@source": "node13", "@target": "node14", "^ot:posteriorSupport": 1}, "edge16": {"@source": "node13", "@target": "node17"}}, "node131": {"edge131": {"@source": "node131", "@target": "node132", "^ot:posteriorSupport": 1}, "edge144": {"@source": "node131", "@target": "node145"}}, "node132": {"edge132": {"@source": "node132", "@target": "node133", "^ot:posteriorSupport": 1}, "edge143": {"@source": "node132", "@target": "node144"}}, "node133": {"edge133": {"@source": "node133", "@target": "node134", "^ot:posteriorSupport": 1}, "edge140": {"@source": "node133", "@target": "node141", "^ot:posteriorSupport": 1}}, "node134": {"edge134": {"@source": "node134", "@target": "node135", "^ot:posteriorSupport": 1}, "edge139": {"@source": "node134", "@target": "node140"}}, "node135": {"edge135": {"@source": "node135", "@target": "node136", "^ot:posteriorSupport": 1}, "edge138": {"@source": "node135", "@target": "node139"}}, "node136": {"edge136": {"@source": "node136", "@target": "node137"}, "edge137": {"@source": "node136", "@target": "node138"}}, "node14": {"edge14": {"@source": "node14", "@target": "node15"}, "edge15": {"@source": "node14", "@target": "node16"}}, "node141": {"edge141": {"@source": "node141", "@target": "node142"}, "edge142": {"@source": "node141", "@target": "node143"}}, "node146": {"edge146": {"@source": "node146", "@target": "node147", "^ot:posteriorSupport": 1}, "edge159": {"@source": "node146", "@target": "node160", "^ot:posteriorSupport": 1}}, "node147": {"edge147": {"@source": "node147", "@target": "node148", "^ot:posteriorSupport": 1}, "edge156": {"@source": "node147", "@target": "node157", "^ot:posteriorSupport": 1}}, "node148": {"edge148": {"@source": "node148", "@target": "node149", "^ot:posteriorSupport": 1}, "edge153": {"@source": "node148", "@target": "node154", "^ot:posteriorSupport": 1}}, "node149": {"edge149": {"@source": "node149", "@target": "node150", "^ot:posteriorSupport": 1}, "edge152": {"@source": "node149", "@target": "node153"}}, "node150": {"edge150": {"@source": "node150", "@target": "node151"}, "edge151": {"@source": "node150", "@target": "node152"}}, "node154": {"edge154": {"@source": "node154", "@target": "node155"}, "edge155": {"@source": "node154", "@target": "node156"}}, "node157": {"edge157": {"@source": "node157", "@target": "node158"}, "edge158": {"@source": "node157", "@target": "node159"}}, "node160": {"edge160": {"@source": "node160", "@target": "node161", "^ot:posteriorSupport": 1}, "edge167": {"@source": "node160", "@target": "node168"}}, "node161": {"edge161": {"@source": "node161", "@target": "node162", "^ot:posteriorSupport": 1}, "edge164": {"@source": "node161", "@target": "node165", "^ot:posteriorSupport": 1}}, "node162": {"edge162": {"@source": "node162", "@target": "node163"}, "edge163": {"@source": "node162", "@target": "node164"}}, "node165": {"edge165": {"@source": "node165", "@target": "node166"}, "edge166": {"@source": "node165", "@target": "node167"}}, "node169": {"edge169": {"@source": "node169", "@target": "node170"}, "edge170": {"@source": "node169", "@target": "node171"}}, "node18": {"edge18": {"@source": "node18", "@target": "node19", "^ot:posteriorSupport": 0.76}, "edge21": {"@source": "node18", "@target": "node22"}}, "node19": {"edge19": {"@source": "node19", "@target": "node20"}, "edge20": {"@source": "node19", "@target": "node21"}}, "node2": {"edge145": {"@source": "node2", "@target": "node146", "^ot:posteriorSupport": 1}, "edge2": {"@source": "node2", "@target": "node3", "^ot:posteriorSupport": 1}}, "node23": {"edge23": {"@source": "node23", "@target": "node24"}, "edge24": {"@source": "node23", "@target": "node25"}}, "node26": {"edge26": {"@source": "node26", "@target": "node27"}, "edge27": {"@source": "node26", "@target": "node28"}}, "node29": {"edge29": {"@source": "node29", "@target": "node30", "^ot:posteriorSupport": 1}, "edge32": {"@source": "node29", "@target": "node33"}}, "node3": {"edge130": {"@source": "node3", "@target": "node131", "^ot:posteriorSupport": 1}, "edge3": {"@source": "node3", "@target": "node4", "^ot:posteriorSupport": 1}}, "node30": {"edge30": {"@source": "node30", "@target": "node31"}, "edge31": {"@source": "node30", "@target": "node32"}}, "node34": {"edge34": {"@source": "node34", "@target": "node35"}, "edge35": {"@source": "node34", "@target": "node36"}}, "node37": {"edge37": {"@source": "node37", "@target": "node38", "^ot:posteriorSupport": 1}, "edge42": {"@source": "node37", "@target": "node43"}}, "node38": {"edge38": {"@source": "node38", "@target": "node39", "^ot:posteriorSupport": 1}, "edge41": {"@source": "node38", "@target": "node42"}}, "node39": {"edge39": {"@source": "node39", "@target": "node40"}, "edge40": {"@source": "node39", "@target": "node41"}}, "node4": {"edge121": {"@source": "node4", "@target": "node122", "^ot:posteriorSupport": 1}, "edge4": {"@source": "node4", "@target": "node5", "^ot:posteriorSupport": 1}}, "node44": {"edge44": {"@source": "node44", "@target": "node45", "^ot:posteriorSupport": 1}, "edge65": {"@source": "node44", "@target": "node66", "^ot:posteriorSupport": 0.88}}, "node45": {"edge45": {"@source": "node45", "@target": "node46", "^ot:posteriorSupport": 1}, "edge62": {"@source": "node45", "@target": "node63", "^ot:posteriorSupport": 1}}, "node46": {"edge46": {"@source": "node46", "@target": "node47", "^ot:posteriorSupport": 1}, "edge57": {"@source": "node46", "@target": "node58", "^ot:posteriorSupport": 1}}, "node47": {"edge47": {"@source": "node47", "@target": "node48", "^ot:posteriorSupport": 1}, "edge54": {"@source": "node47", "@target": "node55", "^ot:posteriorSupport": 1}}, "node48": {"edge48": {"@source": "node48", "@target": "node49", "^ot:posteriorSupport": 1}, "edge53": {"@source": "node48", "@target": "node54"}}, "node49": {"edge49": {"@source": "node49", "@target": "node50", "^ot:posteriorSupport": 0.99}, "edge52": {"@source": "node49", "@target": "node53"}}, "node5": {"edge5": {"@source": "node5", "@target": "node6", "^ot:posteriorSupport": 1}, "edge70": {"@source": "node5", "@target": "node71", "^ot:posteriorSupport": 1}}, "node50": {"edge50": {"@source": "node50", "@target": "node51"}, "edge51": {"@source": "node50", "@target": "node52"}}, "node55": {"edge55": {"@source": "node55", "@target": "node56"}, "edge56": {"@source": "node55", "@target": "node57"}}, "node58": {"edge58": {"@source": "node58", "@target": "node59", "^ot:posteriorSupport": 1}, "edge61": {"@source": "node58", "@target": "node62"}}, "node59": {"edge59": {"@source": "node59", "@target": "node60"}, "edge60": {"@source": "node59", "@target": "node61"}}, "node6": {"edge43": {"@source": "node6", "@target": "node44", "^ot:posteriorSupport": 1}, "edge6": {"@source": "node6", "@target": "node7", "^ot:posteriorSupport": 1}}, "node63": {"edge63": {"@source": "node63", "@target": "node64"}, "edge64": {"@source": "node63", "@target": "node65"}}, "node66": {"edge66": {"@source": "node66", "@target": "node67", "^ot:posteriorSupport": 1}, "edge69": {"@source": "node66", "@target": "node70"}}, "node67": {"edge67": {"@source": "node67", "@target": "node68"}, "edge68": {"@source": "node67", "@target": "node69"}}, "node7": {"edge36": {"@source": "node7", "@target": "node37", "^ot:posteriorSupport": 0.56}, "edge7": {"@source": "node7", "@target": "node8", "^ot:posteriorSupport": 0.71}}, "node71": {"edge118": {"@source": "node71", "@target": "node119", "^ot:posteriorSupport": 1}, "edge71": {"@source": "node71", "@target": "node72", "^ot:posteriorSupport": 1}}, "node72": {"edge113": {"@source": "node72", "@target": "node114", "^ot:posteriorSupport": 1}, "edge72": {"@source": "node72", "@target": "node73", "^ot:posteriorSupport": 0.58}}, "node73": {"edge108": {"@source": "node73", "@target": "node109", "^ot:posteriorSupport": 1}, "edge73": {"@source": "node73", "@target": "node74", "^ot:posteriorSupport": 1}}, "node74": {"edge74": {"@source": "node74", "@target": "node75", "^ot:posteriorSupport": 1}, "edge97": {"@source": "node74", "@target": "node98", "^ot:posteriorSupport": 0.92}}, "node75": {"edge75": {"@source": "node75", "@target": "node76", "^ot:posteriorSupport": 0.57}, "edge90": {"@source": "node75", "@target": "node91", "^ot:posteriorSupport": 1}}, "node76": {"edge76": {"@source": "node76", "@target": "node77", "^ot:posteriorSupport": 0.95}, "edge89": {"@source": "node76", "@target": "node90"}}, "node77": {"edge77": {"@source": "node77", "@target": "node78", "^ot:posteriorSupport": 0.93}, "edge84": {"@source": "node77", "@target": "node85", "^ot:posteriorSupport": 0.95}}, "node78": {"edge78": {"@source": "node78", "@target": "node79", "^ot:posteriorSupport": 0.51}, "edge83": {"@source": "node78", "@target": "node84"}}, "node79": {"edge79": {"@source": "node79", "@target": "node80", "^ot:posteriorSupport": 1}, "edge82": {"@source": "node79", "@target": "node83"}}, "node8": {"edge33": {"@source": "node8", "@target": "node34", "^ot:posteriorSupport": 1}, "edge8": {"@source": "node8", "@target": "node9", "^ot:posteriorSupport": 1}}, "node80": {"edge80": {"@source": "node80", "@target": "node81"}, "edge81": {"@source": "node80", "@target": "node82"}}, "node85": {"edge85": {"@source": "node85", "@target": "node86", "^ot:posteriorSupport": 1}, "edge88": {"@source": "node85", "@target": "node89"}}, "node86": {"edge86": {"@source": "node86", "@target": "node87"}, "edge87": {"@source": "node86", "@target": "node88"}}, "node9": {"edge28": {"@source": "node9", "@target": "node29", "^ot:posteriorSupport": 1}, "edge9": {"@source": "node9", "@target": "node10", "^ot:posteriorSupport": 1}}, "node91": {"edge91": {"@source": "node91", "@target": "node92", "^ot:posteriorSupport": 1}, "edge96": {"@source": "node91", "@target": "node97"}}, "node92": {"edge92": {"@source": "node92", "@target": "node93", "^ot:posteriorSupport": 1}, "edge95": {"@source": "node92", "@target": "node96"}}, "node93": {"edge93": {"@source": "node93", "@target": "node94"}, "edge94": {"@source": "node93", "@target": "node95"}}, "node98": {"edge105": {"@source": "node98", "@target": "node106", "^ot:posteriorSupport": 0.86}, "edge98": {"@source": "node98", "@target": "node99", "^ot:posteriorSupport": 1}}, "node99": {"edge102": {"@source": "node99", "@target": "node103", "^ot:posteriorSupport": 0.54}, "edge99": {"@source": "node99", "@target": "node100", "^ot:posteriorSupport": 1}}}, "nodeById": {"node1": {"@root": true}, "node10": {}, "node100": {}, "node101": {"@otu": "otu46"}, "node102": {"@otu": "otu47"}, "node103": {}, "node104": {"@otu": "otu48"}, "node105": {"@otu": "otu49"}, "node106": {}, "node107": {"@otu": "otu50"}, "node108": {"@otu": "otu51"}, "node109": {}, "node11": {}, "node110": {}, "node111": {"@otu": "otu52"}, "node112": {"@otu": "otu53"}, "node113": {"@otu": "otu54"}, "node114": {}, "node115": {}, "node116": {"@otu": "otu55"}, "node117": {"@otu": "otu56"}, "node118": {"@otu": "otu57"}, "node119": {}, "node12": {}, "node120": {"@otu": "otu58"}, "node121": {"@otu": "otu59"}, "node122": {}, "node123": {}, "node124": {}, "node125": {"@otu": "otu60"}, "node126": {"@otu": "otu61"}, "node127": {}, "node128": {"@otu": "otu62"}, "node129": {"@otu": "otu63"}, "node13": {}, "node130": {"@otu": "otu64"}, "node131": {}, "node132": {}, "node133": {}, "node134": {}, "node135": {}, "node136": {}, "node137": {"@otu": "otu65"}, "node138": {"@otu": "otu66"}, "node139": {"@otu": "otu67"}, "node14": {}, "node140": {"@otu": "otu68"}, "node141": {}, "node142": {"@otu": "otu69"}, "node143": {"@otu": "otu70"}, "node144": {"@otu": "otu71"}, "node145": {"@otu": "otu72"}, "node146": {}, "node147": {}, "node148": {}, "node149": {}, "node15": {"@otu": "otu1"}, "node150": {}, "node151": {"@otu": "otu73"}, "node152": {"@otu": "otu74"}, "node153": {"@otu": "otu75"}, "node154": {}, "node155": {"@otu": "otu76"}, "node156": {"@otu": "otu77"}, "node157": {}, "node158": {"@otu": "otu78"}, "node159": {"@otu": "otu79"}, "node16": {"@otu": "otu2"}, "node160": {}, "node161": {}, "node162": {}, "node163": {"@otu": "otu80"}, "node164": {"@otu": "otu81"}, "node165": {}, "node166": {"@otu": "otu82"}, "node167": {"@otu": "otu83"}, "node168": {"@otu": "otu84"}, "node169": {}, "node17": {"@otu": "otu3"}, "node170": {"@otu": "otu85"}, "node171": {"@otu": "otu86"}, "node18": {}, "node19": {}, "node2": {}, "node20": {"@otu": "otu4"}, "node21": {"@otu": "otu5"}, "node22": {"@otu": "otu6"}, "node23": {}, "node24": {"@otu": "otu7"}, "node25": {"@otu": "otu8"}, "node26": {}, "node27": {"@otu": "otu9"}, "node28": {"@otu": "otu10"}, "node29": {}, "node3": {}, "node30": {}, "node31": {"@otu": "otu11"}, "node32": {"@otu": "otu12"}, "node33": {"@otu": "otu13"}, "node34": {}, "node35": {"@otu": "otu14"}, "node36": {"@otu": "otu15"}, "node37": {}, "node38": {}, "node39": {}, "node4": {}, "node40": {"@otu": "otu16"}, "node41": {"@otu": "otu17"}, "node42": {"@otu": "otu18"}, "node43": {"@otu": "otu19"}, "node44": {}, "node45": {}, "node46": {}, "node47": {}, "node48": {}, "node49": {}, "node5": {}, "node50": {}, "node51": {"@otu": "otu20"}, "node52": {"@otu": "otu21"}, "node53": {"@otu": "otu22"}, "node54": {"@otu": "otu23"}, "node55": {}, "node56": {"@otu": "otu24"}, "node57": {"@otu": "otu25"}, "node58": {}, "node59": {}, "node6": {}, "node60": {"@otu": "otu26"}, "node61": {"@otu": "otu27"}, "node62": {"@otu": "otu28"}, "node63": {}, "node64": {"@otu": "otu29"}, "node65": {"@otu": "otu30"}, "node66": {}, "node67": {}, "node68": {"@otu": "otu31"}, "node69": {"@otu": "otu32"}, "node7": {}, "node70": {"@otu": "otu33"}, "node71": {}, "node72": {}, "node73": {}, "node74": {}, "node75": {}, "node76": {}, "node77": {}, "node78": {}, "node79": {}, "node8": {}, "node80": {}, "node81": {"@otu": "otu34"}, "node82": {"@otu": "otu35"}, "node83": {"@otu": "otu36"}, "node84": {"@otu": "otu37"}, "node85": {}, "node86": {}, "node87": {"@otu": "otu38"}, "node88": {"@otu": "otu39"}, "node89": {"@otu": "otu40"}, "node9": {}, "node90": {"@otu": "otu41"}, "node91": {}, "node92": {}, "node93": {}, "node94": {"@otu": "otu42"}, "node95": {"@otu": "otu43"}, "node96": {"@otu": "otu44"}, "node97": {"@otu": "otu45"}, "node98": {}, "node99": {}}}}}}}}, "branch2sha": {"master": "6bed60428352c04d00341ad513a8efb9442e4d8a"}, "commentHTML": "", "duplicateStudyIDs": [], "shardName": "phylesystem-1", "versionHistory": [{"id": "eedf7fc66a57f4899d65631210ec04652305f08a", "author_name": "jwaterford", "author_email": "jwaterford@ucsd.edu", "date": "Wed, 12 Jul 2023 15:50:00 +0000", "date_ISO_8601": "2023-07-12 15:50:00 +0000", "relative_date": "2 years, 9 months ago", "message_subject": "Mapped tips to CLO taxa", "message_body": "(Update document 'ot_816' via OpenTree API)"}, {"id": "83747bcaed273314437a31f6fb11ee2cd92a64f2", "author_name": "Joseph W. Brown", "author_email": "ANONYMOUS", "date": "Mon, 26 Sep 2016 20:23:05 +0000", "date_ISO_8601": "2016-09-26 20:23:05 +0000", "relative_date": "10 years ago", "message_subject": "inexact map", "message_body": "(Update document 'ot_816' via OpenTree API)"}, {"id": "d4aa3efe50f4f1058a50c7d4154510dd444730f5", "author_name": "Joseph W. Brown", "author_email": "ANONYMOUS", "date": "Mon, 26 Sep 2016 20:22:48 +0000", "date_ISO_8601": "2016-09-26 20:22:48 +0000", "relative_date": "10 years ago", "message_subject": "exact map", "message_body": "(Update document 'ot_816' via OpenTree API)"}, {"id": "2dfa6700999aa1f7ff19a9049953b9234f847f59", "author_name": "Joseph W. Brown", "author_email": "ANONYMOUS", "date": "Mon, 26 Sep 2016 20:22:02 +0000", "date_ISO_8601": "2016-09-26 20:22:02 +0000", "relative_date": "10 years ago", "message_subject": "tree", "message_body": "(Update document 'ot_816' via OpenTree API)"}, {"id": "a06b283be7746de033b3a1016414701658340e46", "author_name": "Joseph W. Brown", "author_email": "ANONYMOUS", "date": "Mon, 26 Sep 2016 20:21:11 +0000", "date_ISO_8601": "2016-09-26 20:21:11 +0000", "relative_date": "10 years ago", "message_subject": "init", "message_body": "(Update document 'ot_816' via OpenTree API)"}, {"id": "d662fe2703f210aba5a0af7f54163d6181e9700b", "author_name": "Joseph W. Brown", "author_email": "ANONYMOUS", "date": "Mon, 26 Sep 2016 20:19:55 +0000", "date_ISO_8601": "2016-09-26 20:19:55 +0000", "relative_date": "10 years ago", "message_subject": "Update document 'ot_816' via OpenTree API"}]}