{"sha": "17ef8789bb8c7de13f285d5198c4e6c120695f80", "data": {"nexml": {"@about": "#study", "@generator": "Open Tree API", "@id": "study", "@nexml2json": "0.0.0", "@nexmljson": "http://purl.org/opentree/nexson", "@version": "0.9", "@xmlns": {"$": "http://www.nexml.org/2009", "nex": "http://www.nexml.org/2009", "ot": "http://purl.org/opentree-terms#", "xhtml": "http://www.w3.org/1999/xhtml/vocab#", "xsd": "http://www.w3.org/2001/XMLSchema#", "xsi": "http://www.w3.org/2001/XMLSchema-instance"}, "otus": {"@id": "otus1", "otu": [{"@id": "otu1", "@about": "#otu1", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Menura novaehollandiae"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 531206}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Menura novaehollandiae"}]}, {"@id": "otu10", "@about": "#otu10", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Newtonia brunneicauda"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 613886}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Newtonia brunneicauda"}]}, {"@id": "otu11", "@about": "#otu11", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Mystacornis crossleyi"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 503738}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Mystacornis crossleyi"}]}, {"@id": "otu12", "@about": "#otu12", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Tylas eduardi"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 891675}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Tylas eduardi"}]}, {"@id": "otu13", "@about": "#otu13", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Oriolus oriolus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 299687}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Oriolus oriolus"}]}, {"@id": "otu14", "@about": "#otu14", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Laniarius aethiopicus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 617802}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Laniarius aethiopicus"}]}, {"@id": "otu15", "@about": "#otu15", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Bias musicus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 826470}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Bias musicus"}]}, {"@id": "otu16", "@about": "#otu16", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Dryoscopus gambensis"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 331949}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Dryoscopus gambensis"}]}, {"@id": "otu17", "@about": "#otu17", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Lanius collurio"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 489155}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Lanius collurio"}]}, {"@id": "otu18", "@about": "#otu18", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Tchagra minuta"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 775144}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Tchagra minuta"}]}, {"@id": "otu19", "@about": "#otu19", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Pityriasis gymnocephala"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 639780}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Pityriasis gymnocephala"}]}, {"@id": "otu2", "@about": "#otu2", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Pycnonotus barbatus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 1054509}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Pycnonotus barbatus"}]}, {"@id": "otu20", "@about": "#otu20", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Calicalicus madagascariensis"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 606459}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Calicalicus madagascariensis"}]}, {"@id": "otu21", "@about": "#otu21", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Dicrurus forficatus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 489690}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Dicrurus forficatus"}]}, {"@id": "otu22", "@about": "#otu22", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Aegithina tiphia"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 1054561}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Aegithina tiphia"}]}, {"@id": "otu23", "@about": "#otu23", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Terpsiphone mutata"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 616161}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Terpsiphone mutata"}]}, {"@id": "otu24", "@about": "#otu24", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Grallina cyanoleuca"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 754846}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Grallina cyanoleuca"}]}, {"@id": "otu25", "@about": "#otu25", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Prionops plumatus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 269023}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Prionops plumatus"}]}, {"@id": "otu26", "@about": "#otu26", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Peltops montanus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 72045}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Peltops montanus"}]}, {"@id": "otu27", "@about": "#otu27", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Artamus leucorynchus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 1054555}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Artamus leucorhynchus"}]}, {"@id": "otu28", "@about": "#otu28", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Cracticus nigrogularis"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 895518}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Cracticus nigrogularis"}]}, {"@id": "otu29", "@about": "#otu29", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Gymnorhina tibicen"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 464854}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Gymnorhina tibicen"}]}, {"@id": "otu3", "@about": "#otu3", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Vireo olivaceus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 604019}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Vireo olivaceus"}]}, {"@id": "otu30", "@about": "#otu30", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Leptopterus chabert"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 613875}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Leptopterus chabert"}]}, {"@id": "otu31", "@about": "#otu31", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Cyanolanius madagascarinus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 666904}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Cyanolanius madagascarinus"}]}, {"@id": "otu32", "@about": "#otu32", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Vanga curvirostris"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 317262}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Vanga curvirostris"}]}, {"@id": "otu33", "@about": "#otu33", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Schetba rufa"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 1015787}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Schetba rufa"}]}, {"@id": "otu34", "@about": "#otu34", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Euryceros prevostii"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 799934}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Euryceros prevostii"}]}, {"@id": "otu35", "@about": "#otu35", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Xenopirostris xenopirostris"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 976176}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Xenopirostris xenopirostris"}]}, {"@id": "otu36", "@about": "#otu36", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Falculea palliata"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 317248}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Falculea palliata"}]}, {"@id": "otu4", "@about": "#otu4", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Cyclarhis gujanensis"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 621721}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Cyclarhis gujanensis"}]}, {"@id": "otu5", "@about": "#otu5", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Vireolanius pulchellus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 3598043}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Vireolanius pulchellus"}]}, {"@id": "otu6", "@about": "#otu6", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Urocissa erythrorhyncha"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 662800}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Urocissa erythrorhyncha"}]}, {"@id": "otu7", "@about": "#otu7", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Pericrocotus ethologus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 269014}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Pericrocotus ethologus"}]}, {"@id": "otu8", "@about": "#otu8", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Batis minor"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 512192}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Batis minor"}]}, {"@id": "otu9", "@about": "#otu9", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Platysteira cyanea"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 21003}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Platysteira cyanea"}]}], "@about": "#otus1"}, "trees": {"@otus": "otus1", "@id": "trees1", "tree": [{"@label": "Untitled (tree1)", "@xsi:type": "nex:FloatTree", "node": [{"@root": true, "@id": "node1", "@about": "#node1"}, {"@otu": "otu1", "@id": "node2", "@about": "#node2", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node3", "@about": "#node3"}, {"@id": "node11", "@about": "#node11"}, {"@otu": "otu6", "@id": "node12", "@about": "#node12", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node13", "@about": "#node13"}, {"@otu": "otu7", "@id": "node14", "@about": "#node14", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node15", "@about": "#node15"}, {"@id": "node16", "@about": "#node16"}, {"@otu": "otu8", "@id": "node17", "@about": "#node17", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu9", "@id": "node18", "@about": "#node18", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node19", "@about": "#node19"}, {"@otu": "otu10", "@id": "node20", "@about": "#node20", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu11", "@id": "node21", "@about": "#node21", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node22", "@about": "#node22"}, {"@id": "node23", "@about": "#node23"}, {"@otu": "otu12", "@id": "node24", "@about": "#node24", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu13", "@id": "node25", "@about": "#node25", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node26", "@about": "#node26"}, {"@otu": "otu14", "@id": "node27", "@about": "#node27", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node28", "@about": "#node28"}, {"@id": "node29", "@about": "#node29"}, {"@otu": "otu15", "@id": "node30", "@about": "#node30", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node31", "@about": "#node31"}, {"@otu": "otu16", "@id": "node32", "@about": "#node32", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node33", "@about": "#node33"}, {"@otu": "otu17", "@id": "node34", "@about": "#node34", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node35", "@about": "#node35"}, {"@otu": "otu18", "@id": "node36", "@about": "#node36", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu19", "@id": "node37", "@about": "#node37", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node38", "@about": "#node38"}, {"@otu": "otu20", "@id": "node39", "@about": "#node39", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node40", "@about": "#node40"}, {"@otu": "otu21", "@id": "node41", "@about": "#node41", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node42", "@about": "#node42"}, {"@otu": "otu22", "@id": "node43", "@about": "#node43", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node44", "@about": "#node44"}, {"@otu": "otu23", "@id": "node45", "@about": "#node45", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu24", "@id": "node46", "@about": "#node46", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node47", "@about": "#node47"}, {"@otu": "otu25", "@id": "node48", "@about": "#node48", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node49", "@about": "#node49"}, {"@otu": "otu26", "@id": "node50", "@about": "#node50", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node51", "@about": "#node51"}, {"@otu": "otu27", "@id": "node52", "@about": "#node52", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node53", "@about": "#node53"}, {"@id": "node54", "@about": "#node54"}, {"@otu": "otu28", "@id": "node55", "@about": "#node55", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu29", "@id": "node56", "@about": "#node56", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node57", "@about": "#node57"}, {"@id": "node58", "@about": "#node58"}, {"@otu": "otu30", "@id": "node59", "@about": "#node59", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu31", "@id": "node60", "@about": "#node60", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node61", "@about": "#node61"}, {"@otu": "otu32", "@id": "node62", "@about": "#node62", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu33", "@id": "node63", "@about": "#node63", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node64", "@about": "#node64"}, {"@otu": "otu34", "@id": "node65", "@about": "#node65", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node66", "@about": "#node66"}, {"@otu": "otu35", "@id": "node67", "@about": "#node67", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu36", "@id": "node68", "@about": "#node68", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node4", "@about": "#node4"}, {"@id": "node5", "@about": "#node5"}, {"@otu": "otu2", "@id": "node6", "@about": "#node6", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu3", "@id": "node7", "@about": "#node7", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node8", "@about": "#node8"}, {"@otu": "otu4", "@id": "node9", "@about": "#node9", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu5", "@id": "node10", "@about": "#node10", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}], "edge": [{"@source": "node1", "@target": "node2", "@id": "edge1", "@about": "#edge1"}, {"@source": "node1", "@target": "node3", "@id": "edge2", "@about": "#edge2"}, {"@source": "node3", "@target": "node11", "@id": "edge10", "@about": "#edge10"}, {"@source": "node11", "@target": "node12", "@id": "edge11", "@about": "#edge11"}, {"@source": "node11", "@target": "node13", "@id": "edge12", "@about": "#edge12"}, {"@source": "node13", "@target": "node14", "@id": "edge13", "@about": "#edge13"}, {"@source": "node13", "@target": "node15", "@id": "edge14", "@about": "#edge14"}, {"@source": "node15", "@target": "node16", "@id": "edge15", "@about": "#edge15"}, {"@source": "node16", "@target": "node17", "@id": "edge16", "@about": "#edge16"}, {"@source": "node16", "@target": "node18", "@id": "edge17", "@about": "#edge17"}, {"@source": "node16", "@target": "node19", "@id": "edge18", "@about": "#edge18"}, {"@source": "node19", "@target": "node20", "@id": "edge19", "@about": "#edge19"}, {"@source": "node19", "@target": "node21", "@id": "edge20", "@about": "#edge20"}, {"@source": "node15", "@target": "node22", "@id": "edge21", "@about": "#edge21"}, {"@source": "node22", "@target": "node23", "@id": "edge22", "@about": "#edge22"}, {"@source": "node23", "@target": "node24", "@id": "edge23", "@about": "#edge23"}, {"@source": "node23", "@target": "node25", "@id": "edge24", "@about": "#edge24"}, {"@source": "node22", "@target": "node26", "@id": "edge25", "@about": "#edge25"}, {"@source": "node26", "@target": "node27", "@id": "edge26", "@about": "#edge26"}, {"@source": "node26", "@target": "node28", "@id": "edge27", "@about": "#edge27"}, {"@source": "node28", "@target": "node29", "@id": "edge28", "@about": "#edge28"}, {"@source": "node29", "@target": "node30", "@id": "edge29", "@about": "#edge29"}, {"@source": "node29", "@target": "node31", "@id": "edge30", "@about": "#edge30"}, {"@source": "node31", "@target": "node32", "@id": "edge31", "@about": "#edge31"}, {"@source": "node31", "@target": "node33", "@id": "edge32", "@about": "#edge32"}, {"@source": "node33", "@target": "node34", "@id": "edge33", "@about": "#edge33"}, {"@source": "node33", "@target": "node35", "@id": "edge34", "@about": "#edge34"}, {"@source": "node35", "@target": "node36", "@id": "edge35", "@about": "#edge35"}, {"@source": "node35", "@target": "node37", "@id": "edge36", "@about": "#edge36"}, {"@source": "node29", "@target": "node38", "@id": "edge37", "@about": "#edge37"}, {"@source": "node38", "@target": "node39", "@id": "edge38", "@about": "#edge38"}, {"@source": "node38", "@target": "node40", "@id": "edge39", "@about": "#edge39"}, {"@source": "node40", "@target": "node41", "@id": "edge40", "@about": "#edge40"}, {"@source": "node40", "@target": "node42", "@id": "edge41", "@about": "#edge41"}, {"@source": "node42", "@target": "node43", "@id": "edge42", "@about": "#edge42"}, {"@source": "node42", "@target": "node44", "@id": "edge43", "@about": "#edge43"}, {"@source": "node44", "@target": "node45", "@id": "edge44", "@about": "#edge44"}, {"@source": "node44", "@target": "node46", "@id": "edge45", "@about": "#edge45"}, {"@source": "node28", "@target": "node47", "@id": "edge46", "@about": "#edge46"}, {"@source": "node47", "@target": "node48", "@id": "edge47", "@about": "#edge47"}, {"@source": "node47", "@target": "node49", "@id": "edge48", "@about": "#edge48"}, {"@source": "node49", "@target": "node50", "@id": "edge49", "@about": "#edge49"}, {"@source": "node49", "@target": "node51", "@id": "edge50", "@about": "#edge50"}, {"@source": "node51", "@target": "node52", "@id": "edge51", "@about": "#edge51"}, {"@source": "node51", "@target": "node53", "@id": "edge52", "@about": "#edge52"}, {"@source": "node53", "@target": "node54", "@id": "edge53", "@about": "#edge53"}, {"@source": "node54", "@target": "node55", "@id": "edge54", "@about": "#edge54"}, {"@source": "node54", "@target": "node56", "@id": "edge55", "@about": "#edge55"}, {"@source": "node53", "@target": "node57", "@id": "edge56", "@about": "#edge56"}, {"@source": "node57", "@target": "node58", "@id": "edge57", "@about": "#edge57"}, {"@source": "node58", "@target": "node59", "@id": "edge58", "@about": "#edge58"}, {"@source": "node58", "@target": "node60", "@id": "edge59", "@about": "#edge59"}, {"@source": "node57", "@target": "node61", "@id": "edge60", "@about": "#edge60"}, {"@source": "node61", "@target": "node62", "@id": "edge61", "@about": "#edge61"}, {"@source": "node61", "@target": "node63", "@id": "edge62", "@about": "#edge62"}, {"@source": "node61", "@target": "node64", "@id": "edge63", "@about": "#edge63"}, {"@source": "node64", "@target": "node65", "@id": "edge64", "@about": "#edge64"}, {"@source": "node64", "@target": "node66", "@id": "edge65", "@about": "#edge65"}, {"@source": "node66", "@target": "node67", "@id": "edge66", "@about": "#edge66"}, {"@source": "node66", "@target": "node68", "@id": "edge67", "@about": "#edge67"}, {"@source": "node3", "@target": "node4", "@id": "edge3", "@about": "#edge3"}, {"@source": "node4", "@target": "node5", "@id": "edge4", "@about": "#edge4"}, {"@source": "node5", "@target": "node6", "@id": "edge5", "@about": "#edge5"}, {"@source": "node5", "@target": "node7", "@id": "edge6", "@about": "#edge6"}, {"@source": "node4", "@target": "node8", "@id": "edge7", "@about": "#edge7"}, {"@source": "node8", "@target": "node9", "@id": "edge8", "@about": "#edge8"}, {"@source": "node8", "@target": "node10", "@id": "edge9", "@about": "#edge9"}], "@id": "tree1", "@about": "#tree1", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:branchLengthDescription", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:branchLengthMode", "@datatype": "xsd:string", "$": "ot:undefined"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:curatedType", "@datatype": "xsd:string", "$": "Maximum parsimony "}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:inGroupClade", "@datatype": "xsd:string", "$": "node3"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:nodeLabelMode", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:nodeLabelTimeUnit", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:outGroupEdge", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:specifiedRoot", "@datatype": "xsd:string", "$": "node1"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:unrootedTree", "@datatype": "xsd:boolean", "$": false}]}], "@about": "#trees1"}, "meta": [{"agent": [{"@description": "Open Tree NexSON validation", "@id": "peyotl-validator", "@name": "api.opentreeoflife.org/validate", "@url": "https://github.com/OpenTreeOfLife/peyotl", "@version": "0.0.4a", "invocation": {"commandLine": [], "otherProperty": [{"name": "pythonVersion", "value": "2.7.9"}, {"name": "pythonImplementation", "value": "CPython"}]}, "@about": "#peyotl-validator"}, {"@description": "Web-based interface for submitting, editing, and reviewing studies in the Open Tree of Life project.", "@id": "opentree-curation-webapp", "@name": "OpenTree curation webapp", "@url": "https://github.com/OpenTreeOfLife/opentree", "@version": "0.0.0", "@about": "#opentree-curation-webapp"}], "@xsi:type": "nex:LiteralMeta", "@property": "ot:agents"}, {"annotation": [{"@dateCreated": "2016-09-29T18:30:56.418Z", "@description": "Aids for mapping study OTUs to OTT taxa", "@id": "otu-mapping-hints", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "OTU_MAPPING_HINTS", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"searchContext": {"$": "Birds"}, "substitutions": {"substitution": [{"@active": false, "@valid": true, "new": {"$": ""}, "old": {"$": ""}}]}, "useFuzzyMatching": false}, "refersTo": {"@top": {"$": "meta"}}}], "@about": "#otu-mapping-hints"}, {"@dateCreated": "2016-09-29T18:30:56.418Z", "@description": "Describes supporting data files for this study", "@id": "supporting-files-metadata", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "SUPPORTING_FILE_INFO", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"@movedToPermanentArchive": false, "files": {"file": [{"@filename": "PASTED.tre", "@size": 778, "@type": "newick", "@url": "/curator/download/supporting_files.doc.bcda204ab069b019.5041535445442e747265.tre", "description": {"$": "Source data for tree(s) 'tree1'"}, "sourceForTree": [{"$": "tree1"}]}]}}, "refersTo": {"@top": {"$": "meta"}}}], "@about": "#supporting-files-metadata"}, {"@id": "peyotl-validator-event", "@description": "Open Tree NexSON validation", "@wasAssociatedWithAgentId": "peyotl-validator", "@passedChecks": true, "@preserve": false, "message": [{"@code": "UNRECOGNIZED_KEY", "data": ["^ot:comment"], "refersTo": {"@top": "nexml", "@idref": "study"}, "@severity": "WARNING"}, {"@code": "MISSING_OPTIONAL_KEY", "data": ["^ot:branchLengthTimeUnit"], "refersTo": {"@top": "trees", "@idref": "tree1", "@treesID": "trees1", "@treeID": "tree1"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:nodeLabelMode", "^ot:nodeLabelTimeUnit"], "refersTo": {"@top": "trees", "@idref": "tree1", "@treesID": "trees1", "@treeID": "tree1"}, "@severity": "WARNING"}], "@about": "#peyotl-validator-event"}], "@xsi:type": "nex:LiteralMeta", "@property": "ot:annotationEvents"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:candidateTreeForSynthesis", "@datatype": "xsd:string", "$": "tree1"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:comment", "@datatype": "xsd:string", "$": "tree from Davis 2014."}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:curatorName", "@datatype": "xsd:string", "$": "ningwang83"}, {"@href": "", "@xsi:type": "nex:ResourceMeta", "@rel": "ot:dataDeposit"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:focalClade", "@datatype": "xsd:int", "$": 1041547}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:focalCladeOTTTaxonName", "@datatype": "xsd:string", "$": "Passeriformes"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:notIntendedForSynthesis", "@datatype": "xsd:boolean", "$": false}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:studyId", "@datatype": "xsd:string", "$": "ot_847"}, {"@href": "http://dx.doi.org/10.1111/j.1439-0469.2008.00458.x", "@xsi:type": "nex:ResourceMeta", "@rel": "ot:studyPublication"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:studyPublicationReference", "@datatype": "xsd:string", "$": "A. Manegold, 2008, 'Composition and phylogenetic affinities of vangas (Vangidae, Oscines, Passeriformes) based on morphological characters', Journal of Zoological Systematics and Evolutionary Research, vol. 46, no. 3, pp. 267-277"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:studyYear", "@datatype": "xsd:int", "$": 2008}]}}, "branch2sha": {"master": "783c337d3b467b6f3d70bb8decd56861e6050bb1"}, "commentHTML": "
tree from Davis 2014.
", "duplicateStudyIDs": [], "shardName": "phylesystem-1", "versionHistory": [{"id": "e4fedd5a1e5a274a7e93c68d9bd2c8537dd26d26", "author_name": "ningwang83", "author_email": "ANONYMOUS", "date": "Thu, 29 Sep 2016 18:49:53 +0000", "date_ISO_8601": "2016-09-29 18:49:53 +0000", "relative_date": "8 years ago", "message_subject": "make comments", "message_body": "(Update document 'ot_847' via OpenTree API)"}, {"id": "572f0f79e51bb4b5270a50011ed4f31cffde0084", "author_name": "ningwang83", "author_email": "ANONYMOUS", "date": "Thu, 29 Sep 2016 18:49:25 +0000", "date_ISO_8601": "2016-09-29 18:49:25 +0000", "relative_date": "8 years ago", "message_subject": "setup tree", "message_body": "(Update document 'ot_847' via OpenTree API)"}, {"id": "657f7cd8b0898d436b7bfa2e60454a434a0a5a7d", "author_name": "ningwang83", "author_email": "ANONYMOUS", "date": "Thu, 29 Sep 2016 18:45:14 +0000", "date_ISO_8601": "2016-09-29 18:45:14 +0000", "relative_date": "8 years ago", "message_subject": "map OTUs", "message_body": "(Update document 'ot_847' via OpenTree API)"}, {"id": "beae3586bc90d7f83ab37eb3aa35287ef5a21960", "author_name": "ningwang83", "author_email": "ANONYMOUS", "date": "Thu, 29 Sep 2016 18:31:18 +0000", "date_ISO_8601": "2016-09-29 18:31:18 +0000", "relative_date": "8 years ago", "message_subject": "init", "message_body": "(Update document 'ot_847' via OpenTree API)"}, {"id": "ba52089a75c6b8ed04f229bd656fbf0cdd9e67fd", "author_name": "ningwang83", "author_email": "ANONYMOUS", "date": "Thu, 29 Sep 2016 18:30:55 +0000", "date_ISO_8601": "2016-09-29 18:30:55 +0000", "relative_date": "8 years ago", "message_subject": "Update document 'ot_847' via OpenTree API"}]}