{"sha": "6bed60428352c04d00341ad513a8efb9442e4d8a", "data": {"nexml": {"@about": "#study", "@generator": "Open Tree API", "@id": "study", "@nexml2json": "1.2.1", "@nexmljson": "http://purl.org/opentree/nexson", "@version": "0.9", "@xmlns": {"$": "http://www.nexml.org/2009", "nex": "http://www.nexml.org/2009", "ot": "http://purl.org/opentree-terms#", "xhtml": "http://www.w3.org/1999/xhtml/vocab#", "xsd": "http://www.w3.org/2001/XMLSchema#", "xsi": "http://www.w3.org/2001/XMLSchema-instance"}, "^ot:agents": {"agent": [{"@description": "Open Tree NexSON validation", "@id": "peyotl-validator", "@name": "api.opentreeoflife.org/validate", "@url": "https://github.com/OpenTreeOfLife/peyotl", "@version": "0.0.4a", "invocation": {"commandLine": [], "otherProperty": [{"name": "pythonVersion", "value": "2.7.9"}, {"name": "pythonImplementation", "value": "CPython"}]}}, {"@description": "Web-based interface for submitting, editing, and reviewing studies in the Open Tree of Life project.", "@id": "opentree-curation-webapp", "@name": "OpenTree curation webapp", "@url": "https://github.com/OpenTreeOfLife/opentree", "@version": "0.0.0"}]}, "^ot:annotationEvents": {"annotation": [{"@dateCreated": "2016-10-21T15:45:00.303Z", "@description": "Aids for mapping study OTUs to OTT taxa", "@id": "otu-mapping-hints", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "OTU_MAPPING_HINTS", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"searchContext": {"$": "Vertebrates"}, "substitutions": {"substitution": [{"@active": false, "@valid": true, "new": {"$": ""}, "old": {"$": ""}}]}, "useFuzzyMatching": false}, "refersTo": {"@top": {"$": "meta"}}}]}, {"@dateCreated": "2016-10-21T15:45:00.303Z", "@description": "Describes supporting data files for this study", "@id": "supporting-files-metadata", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "SUPPORTING_FILE_INFO", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"@movedToPermanentArchive": false, "files": {"file": [{"@filename": "BythitidaeTree_Moller.new", "@size": 166475, "@type": "nexus", "@url": "/curator/download/supporting_files.doc.97d45d8e47efdf8b.42797468697469646165547265655f4d6f6c6c65722e6e6577.new", "description": {"$": "Source data for tree(s) 'tree2'"}, "sourceForTree": [{"$": "tree2"}]}]}}, "refersTo": {"@top": {"$": "meta"}}}]}, {"@id": "peyotl-validator-event", "@description": "Open Tree NexSON validation", "@wasAssociatedWithAgentId": "peyotl-validator", "@passedChecks": true, "@preserve": false, "message": [{"@code": "MULTIPLE_TIPS_MAPPED_TO_OTT_ID", "data": ["otu23", "otu33", "otu35", "otu36", "otu49"], "refersTo": {"@top": "otus", "@idref": "otus1", "@otusID": "otus1"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:comment"], "refersTo": {"@top": "nexml", "@idref": "study"}, "@severity": "WARNING"}, {"@code": "MISSING_OPTIONAL_KEY", "data": ["^ot:branchLengthTimeUnit"], "refersTo": {"@top": "trees", "@idref": "tree2", "@treesID": "trees1", "@treeID": "tree2"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:nodeLabelMode", "^ot:nodeLabelTimeUnit", "^ot:reasonsToExcludeFromSynthesis"], "refersTo": {"@top": "trees", "@idref": "tree2", "@treesID": "trees1", "@treeID": "tree2"}, "@severity": "WARNING"}, {"@code": "MISSING_OPTIONAL_KEY", "data": ["^ot:ottId"], "refersTo": {"@top": "otus", "@idref": ["otu23", "otu33", "otu35", "otu36", "otu49"], "@otusID": "otus1", "@otuID": ["otu23", "otu33", "otu35", "otu36", "otu49"]}, "@severity": "WARNING"}]}]}, "^ot:candidateTreeForSynthesis": ["tree2"], "^ot:comment": "", "^ot:curatorName": ["Hannah Weller", "Karen Cranston"], "^ot:dataDeposit": {"@href": ""}, "^ot:focalClade": 363181, "^ot:focalCladeOTTTaxonName": "Bythitidae", "^ot:otusElementOrder": ["otus1"], "^ot:studyId": "ot_935", "^ot:studyPublication": {"@href": "http://dx.doi.org/10.1016/j.ympev.2016.04.008"}, "^ot:studyPublicationReference": "Peter Rask M\u00f8ller, Steen Wilhelm Knudsen, Werner Schwarzhans, J\u00f8rgen G. Nielsen, 2016, 'A new classification of viviparous brotulas (Bythitidae) \u2013 with family status for Dinematichthyidae \u2013 based on molecular, morphological and fossil data', Molecular Phylogenetics and Evolution, vol. 100, pp. 391-408", "^ot:studyYear": 2016, "^ot:tag": ["Bythitinae", "Aphyonidae", "Pedomorphism", "Coral reef fishes", "Deep-sea fishes", "Cave fishes"], "^ot:treesElementOrder": ["trees1"], "otusById": {"otus1": {"otuById": {"otu10": {"^ot:originalLabel": "FJ215303 Ventrifossa garmani NCBI", "^ot:ottId": 400678, "^ot:ottTaxonName": "Ventrifossa garmani"}, "otu11": {"^ot:originalLabel": "EF094952 Stylephorus chordatus NCBI", "^ot:ottId": 146678, "^ot:ottTaxonName": "Stylephorus chordatus"}, "otu12": {"^ot:originalLabel": "NC 016870 Seriola dumerili NCBI", "^ot:ottId": 986392, "^ot:ottTaxonName": "Seriola dumerili"}, "otu13": {"^ot:originalLabel": "NC 011219 Rachycentron canadum NCBI", "^ot:ottId": 424305, "^ot:ottTaxonName": "Rachycentron canadum"}, "otu14": {"^ot:originalLabel": "EU477493 Scomber scombrus NCBI", "^ot:ottId": 70561, "^ot:ottTaxonName": "Scomber scombrus"}, "otu15": {"^ot:originalLabel": "EU167899 Rastrelliger brachysoma NCBI", "^ot:ottId": 916275, "^ot:ottTaxonName": "Rastrelliger brachysoma"}, "otu16": {"^ot:originalLabel": "NC 013136 Platax orbicularis NCBI", "^ot:ottId": 773225, "^ot:ottTaxonName": "Platax orbicularis"}, "otu17": {"^ot:originalLabel": "NC 009852 Zanclus cornutus NCBI", "^ot:ottId": 199070, "^ot:ottTaxonName": "Zanclus cornutus"}, "otu18": {"^ot:originalLabel": "JX190872 Macroramphosus scolopax NCBI", "^ot:ottId": 111660, "^ot:ottTaxonName": "Macroramphosus scolopax"}, "otu19": {"^ot:originalLabel": "JX189801 Aeoliscus strigatus NCBI", "^ot:ottId": 652346, "^ot:ottTaxonName": "Aeoliscus strigatus"}, "otu2": {"^ot:originalLabel": "FJ215297 Trachyrincus murrayi NCBI", "^ot:ottId": 476239, "^ot:ottTaxonName": "Trachyrincus murrayi"}, "otu20": {"^ot:originalLabel": "Acanthonus armatus MNHN 2004 1311 E Atlantic Prm81", "^ot:ottId": 3629836, "^ot:ottTaxonName": "Acanthonus armatus"}, "otu21": {"^ot:originalLabel": "Chilara taylori KU28277 NE Pacific PrmB", "^ot:ottId": 426418, "^ot:ottTaxonName": "Chilara taylori"}, "otu22": {"^ot:originalLabel": "Lepophidium profundorum KU27197 NW Atlantic PrmE", "^ot:ottId": 941271, "^ot:ottTaxonName": "Lepophidium profundorum"}, "otu23": {"^ot:altLabel": "Dicrolene intronigra", "^ot:originalLabel": "Dicrolene intronigra MCZ158834 NW Atlantic Prm14"}, "otu24": {"^ot:originalLabel": "Monomitopus garmani ZMUC P771573 SW Pacific 89", "^ot:ottId": 3629746, "^ot:ottTaxonName": "Monomitopus garmani"}, "otu25": {"^ot:originalLabel": "Dannevigia tusca none discarded SW Pacific Prm95", "^ot:ottId": 3629741, "^ot:ottTaxonName": "Dannevigia tusca"}, "otu26": {"^ot:originalLabel": "Ventichthys biospeedoi MNHN 2004 2038 PT SE Pacific Prm19", "^ot:ottId": 4134350, "^ot:ottTaxonName": "Ventichthys biospeedoi"}, "otu27": {"^ot:originalLabel": "Holcomycteronus brucei ZMUC P771528 S Indian Ocean Prm116", "^ot:ottId": 3629771, "^ot:ottTaxonName": "Holcomycteronus brucei"}, "otu28": {"^ot:originalLabel": "Apagesoma australis ZMUC P771525 S Indian Ocean Prm120", "^ot:ottId": 3629759, "^ot:ottTaxonName": "Apagesoma australis"}, "otu29": {"^ot:originalLabel": "Bassogigas walkeri SIO 08 109 SW Pacific 151", "^ot:ottId": 3629769, "^ot:ottTaxonName": "Bassogigas walkeri"}, "otu3": {"^ot:originalLabel": "JN230904 Merluccius merluccius NCBI", "^ot:ottId": 62642, "^ot:ottTaxonName": "Merluccius merluccius"}, "otu30": {"^ot:originalLabel": "Leucicorus atlanticus ZMUC P771571 SW Pacific 87", "^ot:ottId": 3629862, "^ot:ottTaxonName": "Leucicorus atlanticus"}, "otu31": {"^ot:originalLabel": "Porogadus miles ZMUB MAR 2661 N Atlantic Prm06", "^ot:ottId": 3629849, "^ot:ottTaxonName": "Porogadus miles"}, "otu32": {"^ot:originalLabel": "Luciobrotula bartschi ZMUC P771572 SW Pacific 88", "^ot:ottId": 3629776, "^ot:ottTaxonName": "Luciobrotula bartschi"}, "otu33": {"^ot:altLabel": "Ogilbia sp", "^ot:originalLabel": "Ogilbia sp ZMUC P771733 NW Atlantic 149"}, "otu34": {"^ot:originalLabel": "Ogilbia cayorum ZMUC P771463 NW Atlantic Prm48", "^ot:ottId": 3629934, "^ot:ottTaxonName": "Ogilbia cayorum"}, "otu35": {"^ot:altLabel": "Ogilbichthys sp", "^ot:originalLabel": "Ogilbichthys sp n USNM 349073 NW Atlantic Prm11"}, "otu36": {"^ot:altLabel": "Typhliacina pearsei", "^ot:originalLabel": "Typhliacina pearsei ZMUC P771455 W Atlantic PrmV "}, "otu37": {"^ot:originalLabel": "Dinematichthys iluocoeteoides USNM 334123 SE Pacific Prm12", "^ot:ottId": 80330, "^ot:ottTaxonName": "Dinematichthys iluocoeteoides"}, "otu38": {"^ot:originalLabel": "Diancistrus jeffjohnsoni NT 159 1 of 2 E Indian Ocean Prm21", "^ot:ottId": 3630005, "^ot:ottTaxonName": "Diancistrus jeffjohnsoni"}, "otu39": {"^ot:originalLabel": "Diancistrus typhlops uncat E Indian Ocean 1148", "^ot:ottId": 3630049, "^ot:ottTaxonName": "Diancistrus typhlops"}, "otu4": {"^ot:originalLabel": "JX190851 Lota lota NCBI", "^ot:ottId": 440414, "^ot:ottTaxonName": "Lota lota"}, "otu40": {"^ot:originalLabel": "Diancistrus tongaensis USNM 374200 SE Pacific Prm16", "^ot:ottId": 3629983, "^ot:ottTaxonName": "Diancistrus tongaensis"}, "otu41": {"^ot:originalLabel": "Tuamotuichthys schwarzhansi ZMUC P771583 SW Pacific 76", "^ot:ottId": 3630050, "^ot:ottTaxonName": "Tuamotuichthys schwarzhansi"}, "otu42": {"^ot:originalLabel": "Sciadonus galatheae ZMUC P771588 SW Pacific 72", "^ot:ottId": 3630117, "^ot:ottTaxonName": "Sciadonus galatheae"}, "otu43": {"^ot:originalLabel": "Barathronus diaphanus ZMUC P771586 SW Pacific 73", "^ot:ottId": 3630097, "^ot:ottTaxonName": "Barathronus diaphanus"}, "otu44": {"^ot:originalLabel": "Aphyonus gelatinosus ZMUB MAR 3880 N Atlantic Prm41", "^ot:ottId": 3630109, "^ot:ottTaxonName": "Aphyonus gelatinosus"}, "otu45": {"^ot:originalLabel": "Cataetyx niki NMNZ P41257 SW Pacific Prm53", "^ot:ottId": 3629910, "^ot:ottTaxonName": "Cataetyx niki"}, "otu46": {"^ot:originalLabel": "Diplacanthopoma brachysoma MCZ155341 NW Atlantic Prm13", "^ot:ottId": 363183, "^ot:ottTaxonName": "Diplacanthopoma brachysoma"}, "otu47": {"^ot:originalLabel": "Bidenichthys capensis SAIAB uncat not seen SE Indian Ocean Prm18", "^ot:ottId": 3630024, "^ot:ottTaxonName": "Bidenichthys capensis"}, "otu48": {"^ot:originalLabel": "Cataetyx messieri ZMUC P771617 SE Pacific 75", "^ot:ottId": 3629909, "^ot:ottTaxonName": "Cataetyx messieri"}, "otu49": {"^ot:altLabel": "Bellotia galathea", "^ot:originalLabel": "Bellotia galathea ZMUC P771582 SW Pacific 74"}, "otu5": {"^ot:originalLabel": "FJ215294 Gadus chalcogrammus NCBI", "^ot:ottId": 1056842, "^ot:ottTaxonName": "Gadus chalcogrammus"}, "otu50": {"^ot:originalLabel": "JX190863 Monocentris japonicus NCBI", "^ot:ottId": 837716, "^ot:ottTaxonName": "Monocentris japonicus"}, "otu51": {"^ot:originalLabel": "JX190859 Rondeletia loricata NCBI", "^ot:ottId": 765014, "^ot:ottTaxonName": "Rondeletia loricata"}, "otu52": {"^ot:originalLabel": "JX190855 Barbourisia rufa NCBI", "^ot:ottId": 118778, "^ot:ottTaxonName": "Barbourisia rufa"}, "otu53": {"^ot:originalLabel": "EF095636 Beryx splendens NCBI", "^ot:ottId": 118780, "^ot:ottTaxonName": "Beryx splendens"}, "otu54": {"^ot:originalLabel": "JX189798 Beryx decadactylus NCBI", "^ot:ottId": 1068314, "^ot:ottTaxonName": "Beryx decadactylus"}, "otu6": {"^ot:originalLabel": "FJ215262 Melanogrammus aeglefinus NCBI", "^ot:ottId": 635904, "^ot:ottTaxonName": "Melanogrammus aeglefinus"}, "otu7": {"^ot:originalLabel": "FJ215265 Merlangius merlangus NCBI", "^ot:ottId": 635911, "^ot:ottTaxonName": "Merlangius merlangus"}, "otu8": {"^ot:originalLabel": "FJ215289 Pollachius virens NCBI", "^ot:ottId": 62649, "^ot:ottTaxonName": "Pollachius virens"}, "otu9": {"^ot:originalLabel": "AF369064 Gadus morhua NCBI", "^ot:ottId": 114170, "^ot:ottTaxonName": "Gadus morhua (species in domain Eukaryota)"}}}}, "treesById": {"trees1": {"@otus": "otus1", "^ot:treeElementOrder": ["tree2"], "treeById": {"tree2": {"@label": "TREE1", "@xsi:type": "nex:FloatTree", "^ot:branchLengthDescription": "", "^ot:branchLengthMode": "ot:bootstrapValues", "^ot:curatedType": "Bayesian inference ", "^ot:inGroupClade": "node22", "^ot:nodeLabelMode": "", "^ot:nodeLabelTimeUnit": "", "^ot:outGroupEdge": "", "^ot:reasonsToExcludeFromSynthesis": [], "^ot:rootNodeId": "tree2_ROOT", "^ot:specifiedRoot": "tree2_ROOT", "^ot:tag": [], "^ot:unrootedTree": false, "edgeBySourceId": {"node100": {"edge100": {"@length": 20.536312, "@source": "node100", "@target": "node101"}, "edge103": {"@length": 56.952588, "@source": "node100", "@target": "node104"}}, "node101": {"edge101": {"@length": 43.475145, "@source": "node101", "@target": "node102"}, "edge102": {"@length": 43.475145, "@source": "node101", "@target": "node103"}}, "node104": {"edge104": {"@length": 7.05887, "@source": "node104", "@target": "node105"}, "edge105": {"@length": 7.05887, "@source": "node104", "@target": "node106"}}, "node11": {"edge11": {"@length": 6.364673, "@source": "node11", "@target": "node12"}, "edge18": {"@length": 22.763979, "@source": "node11", "@target": "node19"}}, "node12": {"edge12": {"@length": 2.855179, "@source": "node12", "@target": "node13"}, "edge17": {"@length": 16.399306, "@source": "node12", "@target": "node18"}}, "node13": {"edge13": {"@length": 13.544127, "@source": "node13", "@target": "node14"}, "edge14": {"@length": 3.937386, "@source": "node13", "@target": "node15"}}, "node15": {"edge15": {"@length": 9.606741, "@source": "node15", "@target": "node16"}, "edge16": {"@length": 9.606741, "@source": "node15", "@target": "node17"}}, "node2": {"edge21": {"@length": 28.432568, "@source": "node2", "@target": "node22"}}, "node22": {"edge22": {"@length": 8.218252, "@source": "node22", "@target": "node23"}, "edge97": {"@length": 10.213241, "@source": "node22", "@target": "node98"}}, "node23": {"edge23": {"@length": 8.750772, "@source": "node23", "@target": "node24"}, "edge38": {"@length": 9.798645, "@source": "node23", "@target": "node39"}}, "node24": {"edge24": {"@length": 11.771527, "@source": "node24", "@target": "node25"}, "edge35": {"@length": 27.910017, "@source": "node24", "@target": "node36"}}, "node25": {"edge25": {"@length": 7.906701, "@source": "node25", "@target": "node26"}, "edge32": {"@length": 17.483016, "@source": "node25", "@target": "node33"}}, "node26": {"edge26": {"@length": 16.498751, "@source": "node26", "@target": "node27"}, "edge29": {"@length": 49.381892, "@source": "node26", "@target": "node30"}}, "node27": {"edge27": {"@length": 58.446881, "@source": "node27", "@target": "node28"}, "edge28": {"@length": 58.446881, "@source": "node27", "@target": "node29"}}, "node3": {"edge20": {"@length": 97.641474, "@source": "node3", "@target": "node21"}, "edge3": {"@length": 19.546178, "@source": "node3", "@target": "node4"}}, "node30": {"edge30": {"@length": 25.563739, "@source": "node30", "@target": "node31"}, "edge31": {"@length": 25.563739, "@source": "node30", "@target": "node32"}}, "node33": {"edge33": {"@length": 65.369316, "@source": "node33", "@target": "node34"}, "edge34": {"@length": 65.369316, "@source": "node33", "@target": "node35"}}, "node36": {"edge36": {"@length": 66.713843, "@source": "node36", "@target": "node37"}, "edge37": {"@length": 66.713843, "@source": "node36", "@target": "node38"}}, "node39": {"edge39": {"@length": 8.86409, "@source": "node39", "@target": "node40"}, "edge64": {"@length": 19.216263, "@source": "node39", "@target": "node65"}}, "node4": {"edge19": {"@length": 78.095296, "@source": "node4", "@target": "node20"}, "edge4": {"@length": 14.178481, "@source": "node4", "@target": "node5"}}, "node40": {"edge40": {"@length": 84.711897, "@source": "node40", "@target": "node41"}, "edge41": {"@length": 11.41615, "@source": "node40", "@target": "node42"}}, "node42": {"edge42": {"@length": 27.750045, "@source": "node42", "@target": "node43"}, "edge45": {"@length": 19.00949, "@source": "node42", "@target": "node46"}}, "node43": {"edge43": {"@length": 45.545702, "@source": "node43", "@target": "node44"}, "edge44": {"@length": 45.545702, "@source": "node43", "@target": "node45"}}, "node46": {"edge46": {"@length": 4.57406, "@source": "node46", "@target": "node47"}, "edge63": {"@length": 54.286258, "@source": "node46", "@target": "node64"}}, "node47": {"edge47": {"@length": 5.733076, "@source": "node47", "@target": "node48"}, "edge52": {"@length": 11.071668, "@source": "node47", "@target": "node53"}}, "node48": {"edge48": {"@length": 43.979122, "@source": "node48", "@target": "node49"}, "edge49": {"@length": 7.884634, "@source": "node48", "@target": "node50"}}, "node5": {"edge5": {"@length": 9.572494, "@source": "node5", "@target": "node6"}, "edge8": {"@length": 28.957169, "@source": "node5", "@target": "node9"}}, "node50": {"edge50": {"@length": 36.094487, "@source": "node50", "@target": "node51"}, "edge51": {"@length": 36.094487, "@source": "node50", "@target": "node52"}}, "node53": {"edge53": {"@length": 8.054154, "@source": "node53", "@target": "node54"}, "edge60": {"@length": 9.617923, "@source": "node53", "@target": "node61"}}, "node54": {"edge54": {"@length": 30.586376, "@source": "node54", "@target": "node55"}, "edge55": {"@length": 3.181544, "@source": "node54", "@target": "node56"}}, "node56": {"edge56": {"@length": 27.404832, "@source": "node56", "@target": "node57"}, "edge57": {"@length": 7.306055, "@source": "node56", "@target": "node58"}}, "node58": {"edge58": {"@length": 20.098777, "@source": "node58", "@target": "node59"}, "edge59": {"@length": 20.098777, "@source": "node58", "@target": "node60"}}, "node6": {"edge6": {"@length": 54.34432, "@source": "node6", "@target": "node7"}, "edge7": {"@length": 54.34432, "@source": "node6", "@target": "node8"}}, "node61": {"edge61": {"@length": 29.022606, "@source": "node61", "@target": "node62"}, "edge62": {"@length": 29.022606, "@source": "node61", "@target": "node63"}}, "node65": {"edge65": {"@length": 36.450655, "@source": "node65", "@target": "node66"}, "edge80": {"@length": 19.73217, "@source": "node65", "@target": "node81"}}, "node66": {"edge66": {"@length": 12.364184, "@source": "node66", "@target": "node67"}, "edge73": {"@length": 13.653742, "@source": "node66", "@target": "node74"}}, "node67": {"edge67": {"@length": 4.649831, "@source": "node67", "@target": "node68"}, "edge72": {"@length": 25.544884, "@source": "node67", "@target": "node73"}}, "node68": {"edge68": {"@length": 18.519308, "@source": "node68", "@target": "node69"}, "edge71": {"@length": 20.895053, "@source": "node68", "@target": "node72"}}, "node69": {"edge69": {"@length": 2.375745, "@source": "node69", "@target": "node70"}, "edge70": {"@length": 2.375745, "@source": "node69", "@target": "node71"}}, "node74": {"edge74": {"@length": 24.255326, "@source": "node74", "@target": "node75"}, "edge75": {"@length": 5.410758, "@source": "node74", "@target": "node76"}}, "node76": {"edge76": {"@length": 18.844569, "@source": "node76", "@target": "node77"}, "edge77": {"@length": 7.365217, "@source": "node76", "@target": "node78"}}, "node78": {"edge78": {"@length": 11.479352, "@source": "node78", "@target": "node79"}, "edge79": {"@length": 11.479352, "@source": "node78", "@target": "node80"}}, "node81": {"edge81": {"@length": 54.627554, "@source": "node81", "@target": "node82"}, "edge82": {"@length": 5.065076, "@source": "node81", "@target": "node83"}}, "node83": {"edge83": {"@length": 4.988532, "@source": "node83", "@target": "node84"}, "edge96": {"@length": 49.562478, "@source": "node83", "@target": "node97"}}, "node84": {"edge84": {"@length": 2.785757, "@source": "node84", "@target": "node85"}, "edge91": {"@length": 5.868524, "@source": "node84", "@target": "node92"}}, "node85": {"edge85": {"@length": 5.512517, "@source": "node85", "@target": "node86"}, "edge90": {"@length": 41.788189, "@source": "node85", "@target": "node91"}}, "node86": {"edge86": {"@length": 19.364771, "@source": "node86", "@target": "node87"}, "edge89": {"@length": 36.275673, "@source": "node86", "@target": "node90"}}, "node87": {"edge87": {"@length": 16.910902, "@source": "node87", "@target": "node88"}, "edge88": {"@length": 16.910902, "@source": "node87", "@target": "node89"}}, "node9": {"edge10": {"@length": 12.195666, "@source": "node9", "@target": "node11"}, "edge9": {"@length": 34.959645, "@source": "node9", "@target": "node10"}}, "node92": {"edge92": {"@length": 2.511805, "@source": "node92", "@target": "node93"}, "edge95": {"@length": 38.705423, "@source": "node92", "@target": "node96"}}, "node93": {"edge93": {"@length": 36.193618, "@source": "node93", "@target": "node94"}, "edge94": {"@length": 36.193618, "@source": "node93", "@target": "node95"}}, "node98": {"edge98": {"@length": 101.379642, "@source": "node98", "@target": "node99"}, "edge99": {"@length": 37.368185, "@source": "node98", "@target": "node100"}}, "tree2_ROOT": {"edge2": {"@length": 42.383977, "@source": "tree2_ROOT", "@target": "node3"}, "tree2_ROOT_EDGE": {"@source": "tree2_ROOT", "@target": "node2"}}}, "nodeById": {"node10": {"@otu": "otu4"}, "node100": {}, "node101": {}, "node102": {"@otu": "otu51"}, "node103": {"@otu": "otu52"}, "node104": {}, "node105": {"@otu": "otu53"}, "node106": {"@otu": "otu54"}, "node11": {}, "node12": {}, "node13": {}, "node14": {"@otu": "otu5"}, "node15": {}, "node16": {"@otu": "otu6"}, "node17": {"@otu": "otu7"}, "node18": {"@otu": "otu8"}, "node19": {"@otu": "otu9"}, "node2": {}, "node20": {"@otu": "otu10"}, "node21": {"@otu": "otu11"}, "node22": {}, "node23": {}, "node24": {}, "node25": {}, "node26": {}, "node27": {}, "node28": {"@otu": "otu12"}, "node29": {"@otu": "otu13"}, "node3": {}, "node30": {}, "node31": {"@otu": "otu14"}, "node32": {"@otu": "otu15"}, "node33": {}, "node34": {"@otu": "otu16"}, "node35": {"@otu": "otu17"}, "node36": {}, "node37": {"@otu": "otu18"}, "node38": {"@otu": "otu19"}, "node39": {}, "node4": {}, "node40": {}, "node41": {"@otu": "otu20"}, "node42": {}, "node43": {}, "node44": {"@otu": "otu21"}, "node45": {"@otu": "otu22"}, "node46": {}, "node47": {}, "node48": {}, "node49": {"@otu": "otu23"}, "node5": {}, "node50": {}, "node51": {"@otu": "otu24"}, "node52": {"@otu": "otu25"}, "node53": {}, "node54": {}, "node55": {"@otu": "otu26"}, "node56": {}, "node57": {"@otu": "otu27"}, "node58": {}, "node59": {"@otu": "otu28"}, "node6": {}, "node60": {"@otu": "otu29"}, "node61": {}, "node62": {"@otu": "otu30"}, "node63": {"@otu": "otu31"}, "node64": {"@otu": "otu32"}, "node65": {}, "node66": {}, "node67": {}, "node68": {}, "node69": {}, "node7": {"@otu": "otu2"}, "node70": {"@otu": "otu33"}, "node71": {"@otu": "otu34"}, "node72": {"@otu": "otu35"}, "node73": {"@otu": "otu36"}, "node74": {}, "node75": {"@otu": "otu37"}, "node76": {}, "node77": {"@otu": "otu38"}, "node78": {}, "node79": {"@otu": "otu39"}, "node8": {"@otu": "otu3"}, "node80": {"@otu": "otu40"}, "node81": {}, "node82": {"@otu": "otu41"}, "node83": {}, "node84": {}, "node85": {}, "node86": {}, "node87": {}, "node88": {"@otu": "otu42"}, "node89": {"@otu": "otu43"}, "node9": {}, "node90": {"@otu": "otu44"}, "node91": {"@otu": "otu45"}, "node92": {}, "node93": {}, "node94": {"@otu": "otu46"}, "node95": {"@otu": "otu47"}, "node96": {"@otu": "otu48"}, "node97": {"@otu": "otu49"}, "node98": {}, "node99": {"@otu": "otu50"}, "tree2_ROOT": {"@root": true}}}}}}}}, "branch2sha": {"master": "6bed60428352c04d00341ad513a8efb9442e4d8a"}, "commentHTML": "", "duplicateStudyIDs": [], "shardName": "phylesystem-1", "versionHistory": [{"id": "390254a5396d77b2df1789bb580fd5ffb1556a46", "author_name": "Karen Cranston", "author_email": "karen.cranston@gmail.com", "date": "Tue, 13 Dec 2016 22:59:26 +0000", "date_ISO_8601": "2016-12-13 22:59:26 +0000", "relative_date": "9 years ago", "message_subject": "Mapped exact match OTUs", "message_body": "(Update document 'ot_935' via OpenTree API)"}, {"id": "face4b14546a8d2c41adb6802b1a38680c1ae291", "author_name": "Hannah Weller", "author_email": "ANONYMOUS", "date": "Fri, 21 Oct 2016 17:59:39 +0000", "date_ISO_8601": "2016-10-21 17:59:39 +0000", "relative_date": "9 years ago", "message_subject": "Update document 'ot_935' via OpenTree API"}, {"id": "6675dfb68e8a40f05ba0135eaa2edf83d25e3273", "author_name": "Hannah Weller", "author_email": "ANONYMOUS", "date": "Fri, 21 Oct 2016 17:50:14 +0000", "date_ISO_8601": "2016-10-21 17:50:14 +0000", "relative_date": "9 years ago", "message_subject": "Update document 'ot_935' via OpenTree API"}, {"id": "acca52f4bb7e979875922fa79f56310d164e22a2", "author_name": "Hannah Weller", "author_email": "ANONYMOUS", "date": "Fri, 21 Oct 2016 16:25:02 +0000", "date_ISO_8601": "2016-10-21 16:25:02 +0000", "relative_date": "9 years ago", "message_subject": "Brotula tree by Moller et al", "message_body": "(Update document 'ot_935' via OpenTree API)"}, {"id": "cabd2effe19e323fcaa846179e71642421ee07b9", "author_name": "Hannah Weller", "author_email": "ANONYMOUS", "date": "Fri, 21 Oct 2016 16:15:48 +0000", "date_ISO_8601": "2016-10-21 16:15:48 +0000", "relative_date": "9 years ago", "message_subject": "Brotula tree by Moller et al", "message_body": "(Update document 'ot_935' via OpenTree API)"}, {"id": "f36f1ca2720a4d6b2bf54f8b12e265fbc2422dc9", "author_name": "Hannah Weller", "author_email": "ANONYMOUS", "date": "Fri, 21 Oct 2016 15:44:58 +0000", "date_ISO_8601": "2016-10-21 15:44:58 +0000", "relative_date": "9 years ago", "message_subject": "Update document 'ot_935' via OpenTree API"}]}