{"sha": "c33806c9ee11db205ee8c02a42e31b1c3128e299", "data": {"nexml": {"@about": "#study", "@generator": "Open Tree API", "@id": "study", "@nexml2json": "0.0.0", "@nexmljson": "http://purl.org/opentree/nexson", "@version": "0.9", "@xmlns": {"$": "http://www.nexml.org/2009", "nex": "http://www.nexml.org/2009", "ot": "http://purl.org/opentree-terms#", "xhtml": "http://www.w3.org/1999/xhtml/vocab#", "xsd": "http://www.w3.org/2001/XMLSchema#", "xsi": "http://www.w3.org/2001/XMLSchema-instance"}, "otus": {"@id": "otus1", "otu": [{"@id": "otu1", "@about": "#otu1", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Percopsis omiscomaycus"}]}, {"@id": "otu10", "@about": "#otu10", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Myripristis violacea"}]}, {"@id": "otu11", "@about": "#otu11", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Myripristis berndti"}]}, {"@id": "otu12", "@about": "#otu12", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Myripristis murdjan"}]}, {"@id": "otu13", "@about": "#otu13", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Myripristis amaena"}]}, {"@id": "otu14", "@about": "#otu14", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Myripristis hexagona"}]}, {"@id": "otu15", "@about": "#otu15", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Myripristis botche"}]}, {"@id": "otu16", "@about": "#otu16", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Myripristis adusta"}]}, {"@id": "otu17", "@about": "#otu17", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Myripristis randalli"}]}, {"@id": "otu18", "@about": "#otu18", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Ostichthys trachypoma"}]}, {"@id": "otu19", "@about": "#otu19", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Ostichthys japonicus"}]}, {"@id": "otu2", "@about": "#otu2", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Polymixia lowei"}]}, {"@id": "otu20", "@about": "#otu20", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Ostichthys sheni"}]}, {"@id": "otu21", "@about": "#otu21", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Corniger spinosus"}]}, {"@id": "otu22", "@about": "#otu22", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Plectrypops lima"}]}, {"@id": "otu23", "@about": "#otu23", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Plectrypops retrospinus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 692148}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Plectrypops retrospinis"}]}, {"@id": "otu24", "@about": "#otu24", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Sargocentron diadema"}]}, {"@id": "otu25", "@about": "#otu25", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Sargocentron punctassimum"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 584698}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Sargocentron punctatissimum"}]}, {"@id": "otu26", "@about": "#otu26", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Sargocentron microstoma"}]}, {"@id": "otu27", "@about": "#otu27", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Sargocentron ittodai"}]}, {"@id": "otu28", "@about": "#otu28", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Sargocentron coruscum"}]}, {"@id": "otu29", "@about": "#otu29", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Sargocentron vexillarium"}]}, {"@id": "otu3", "@about": "#otu3", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Sargocentron xantherythrum"}]}, {"@id": "otu30", "@about": "#otu30", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Sargocentron suborbitalis"}]}, {"@id": "otu31", "@about": "#otu31", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Neoniphon sammara"}]}, {"@id": "otu32", "@about": "#otu32", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Neoniphon argenteus"}]}, {"@id": "otu33", "@about": "#otu33", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Holocentrus adscensionis"}]}, {"@id": "otu34", "@about": "#otu34", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Holocentrus rufus"}]}, {"@id": "otu35", "@about": "#otu35", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Neoniphon marianus"}]}, {"@id": "otu36", "@about": "#otu36", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Sargocentron rubrum"}]}, {"@id": "otu37", "@about": "#otu37", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Sargocentron cornutum"}]}, {"@id": "otu38", "@about": "#otu38", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Sargocentron praslin"}]}, {"@id": "otu39", "@about": "#otu39", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Sargocentron melanospilos"}]}, {"@id": "otu4", "@about": "#otu4", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Myripristis jacobus"}]}, {"@id": "otu40", "@about": "#otu40", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Sargocentron seychellense"}]}, {"@id": "otu41", "@about": "#otu41", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Sargocentron spiniferum"}]}, {"@id": "otu42", "@about": "#otu42", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Sargocentron violoceum"}]}, {"@id": "otu43", "@about": "#otu43", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Sargocentron caudimaculatum"}]}, {"@id": "otu44", "@about": "#otu44", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Sargocentron tiere"}]}, {"@id": "otu45", "@about": "#otu45", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Sargocentron tiereoides"}]}, {"@id": "otu46", "@about": "#otu46", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Beryx decadactylus"}]}, {"@id": "otu47", "@about": "#otu47", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Aulotrachichthys sajademalensis"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 403035}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Paratrachichthys sajademalensis"}]}, {"@id": "otu48", "@about": "#otu48", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Hoplostethus melanopus"}]}, {"@id": "otu5", "@about": "#otu5", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Myripristis kuntee"}]}, {"@id": "otu6", "@about": "#otu6", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Myripristis vittata"}]}, {"@id": "otu7", "@about": "#otu7", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Myripristis chryseres"}]}, {"@id": "otu8", "@about": "#otu8", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Myripristis pralinia"}]}, {"@id": "otu9", "@about": "#otu9", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Myripristis leioganthus"}]}], "@about": "#otus1"}, "trees": {"@otus": "otus1", "@id": "trees1", "tree": [{"@label": "Holocentridae", "@xsi:type": "nex:FloatTree", "node": [{"@root": true, "@id": "tree1_ROOT", "@about": "#tree1_ROOT"}, {"@otu": "otu1", "@id": "node95", "@about": "#node95", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node1", "@about": "#node1"}, {"@id": "node2", "@about": "#node2"}, {"@id": "node3", "@about": "#node3"}, {"@id": "node4", "@about": "#node4"}, {"@id": "node5", "@about": "#node5"}, {"@id": "node49", "@about": "#node49"}, {"@id": "node50", "@about": "#node50"}, {"@id": "node51", "@about": "#node51"}, {"@id": "node52", "@about": "#node52"}, {"@id": "node53", "@about": "#node53"}, {"@id": "node54", "@about": "#node54"}, {"@id": "node55", "@about": "#node55"}, {"@id": "node56", "@about": "#node56"}, {"@otu": "otu12", "@id": "node57", "@about": "#node57", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu13", "@id": "node58", "@about": "#node58", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu11", "@id": "node59", "@about": "#node59", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node60", "@about": "#node60"}, {"@id": "node61", "@about": "#node61"}, {"@otu": "otu14", "@id": "node62", "@about": "#node62", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu15", "@id": "node63", "@about": "#node63", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu16", "@id": "node64", "@about": "#node64", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu17", "@id": "node65", "@about": "#node65", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu10", "@id": "node66", "@about": "#node66", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu9", "@id": "node67", "@about": "#node67", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node68", "@about": "#node68"}, {"@id": "node69", "@about": "#node69"}, {"@id": "node70", "@about": "#node70"}, {"@otu": "otu4", "@id": "node71", "@about": "#node71", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu5", "@id": "node72", "@about": "#node72", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node73", "@about": "#node73"}, {"@otu": "otu6", "@id": "node74", "@about": "#node74", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu7", "@id": "node75", "@about": "#node75", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu8", "@id": "node76", "@about": "#node76", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node77", "@about": "#node77"}, {"@id": "node78", "@about": "#node78"}, {"@id": "node79", "@about": "#node79"}, {"@otu": "otu19", "@id": "node80", "@about": "#node80", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu20", "@id": "node81", "@about": "#node81", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu18", "@id": "node82", "@about": "#node82", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node83", "@about": "#node83"}, {"@id": "node84", "@about": "#node84"}, {"@otu": "otu22", "@id": "node85", "@about": "#node85", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu23", "@id": "node86", "@about": "#node86", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu21", "@id": "node87", "@about": "#node87", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node6", "@about": "#node6"}, {"@id": "node40", "@about": "#node40"}, {"@id": "node41", "@about": "#node41"}, {"@id": "node42", "@about": "#node42"}, {"@id": "node43", "@about": "#node43"}, {"@otu": "otu24", "@id": "node44", "@about": "#node44", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu25", "@id": "node45", "@about": "#node45", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu26", "@id": "node46", "@about": "#node46", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu27", "@id": "node47", "@about": "#node47", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu28", "@id": "node48", "@about": "#node48", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node7", "@about": "#node7"}, {"@id": "node29", "@about": "#node29"}, {"@id": "node30", "@about": "#node30"}, {"@id": "node31", "@about": "#node31"}, {"@otu": "otu29", "@id": "node32", "@about": "#node32", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu30", "@id": "node33", "@about": "#node33", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node34", "@about": "#node34"}, {"@otu": "otu31", "@id": "node35", "@about": "#node35", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu32", "@id": "node36", "@about": "#node36", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node37", "@about": "#node37"}, {"@otu": "otu33", "@id": "node38", "@about": "#node38", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu34", "@id": "node39", "@about": "#node39", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node8", "@about": "#node8"}, {"@otu": "otu35", "@id": "node28", "@about": "#node28", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node9", "@about": "#node9"}, {"@id": "node19", "@about": "#node19"}, {"@id": "node20", "@about": "#node20"}, {"@id": "node21", "@about": "#node21"}, {"@id": "node22", "@about": "#node22"}, {"@otu": "otu42", "@id": "node23", "@about": "#node23", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu43", "@id": "node24", "@about": "#node24", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu41", "@id": "node25", "@about": "#node25", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu44", "@id": "node26", "@about": "#node26", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu45", "@id": "node27", "@about": "#node27", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node10", "@about": "#node10"}, {"@id": "node11", "@about": "#node11"}, {"@id": "node12", "@about": "#node12"}, {"@otu": "otu36", "@id": "node13", "@about": "#node13", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu37", "@id": "node14", "@about": "#node14", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node15", "@about": "#node15"}, {"@otu": "otu38", "@id": "node16", "@about": "#node16", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu39", "@id": "node17", "@about": "#node17", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu40", "@id": "node18", "@about": "#node18", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu46", "@id": "node88", "@about": "#node88", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node89", "@about": "#node89"}, {"@otu": "otu47", "@id": "node90", "@about": "#node90", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu48", "@id": "node91", "@about": "#node91", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node92", "@about": "#node92"}, {"@otu": "otu2", "@id": "node93", "@about": "#node93", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu3", "@id": "node94", "@about": "#node94", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}], "edge": [{"@length": 0, "@source": "tree1_ROOT", "@target": "node95", "@id": "edge94", "@about": "#edge94"}, {"@source": "tree1_ROOT", "@target": "node1", "@id": "tree1_ROOT_EDGE", "@about": "#tree1_ROOT_EDGE"}, {"@length": 3.310267, "@source": "node1", "@target": "node2", "@id": "edge1", "@about": "#edge1"}, {"@length": 26.08446, "@source": "node2", "@target": "node3", "@id": "edge2", "@about": "#edge2"}, {"@length": 6.976257, "@source": "node3", "@target": "node4", "@id": "edge3", "@about": "#edge3"}, {"@length": 22.11622, "@source": "node4", "@target": "node5", "@id": "edge4", "@about": "#edge4"}, {"@length": 15.787989, "@source": "node5", "@target": "node49", "@id": "edge48", "@about": "#edge48"}, {"@length": 13.956843, "@source": "node49", "@target": "node50", "@id": "edge49", "@about": "#edge49"}, {"@length": 0.959784, "@source": "node50", "@target": "node51", "@id": "edge50", "@about": "#edge50"}, {"@length": 1.567154, "@source": "node51", "@target": "node52", "@id": "edge51", "@about": "#edge51"}, {"@length": 1.139683, "@source": "node52", "@target": "node53", "@id": "edge52", "@about": "#edge52"}, {"@length": 0.890921, "@source": "node53", "@target": "node54", "@id": "edge53", "@about": "#edge53"}, {"@length": 0.792281, "@source": "node54", "@target": "node55", "@id": "edge54", "@about": "#edge54"}, {"@length": 0.60203, "@source": "node55", "@target": "node56", "@id": "edge55", "@about": "#edge55"}, {"@length": 3.930934, "@source": "node56", "@target": "node57", "@id": "edge56", "@about": "#edge56"}, {"@length": 3.930934, "@source": "node56", "@target": "node58", "@id": "edge57", "@about": "#edge57"}, {"@length": 4.532964, "@source": "node55", "@target": "node59", "@id": "edge58", "@about": "#edge58"}, {"@length": 0.87706, "@source": "node54", "@target": "node60", "@id": "edge59", "@about": "#edge59"}, {"@length": 1.148461, "@source": "node60", "@target": "node61", "@id": "edge60", "@about": "#edge60"}, {"@length": 3.299725, "@source": "node61", "@target": "node62", "@id": "edge61", "@about": "#edge61"}, {"@length": 3.299725, "@source": "node61", "@target": "node63", "@id": "edge62", "@about": "#edge62"}, {"@length": 4.448185, "@source": "node60", "@target": "node64", "@id": "edge63", "@about": "#edge63"}, {"@length": 6.216166, "@source": "node53", "@target": "node65", "@id": "edge64", "@about": "#edge64"}, {"@length": 7.355848, "@source": "node52", "@target": "node66", "@id": "edge65", "@about": "#edge65"}, {"@length": 8.923003, "@source": "node51", "@target": "node67", "@id": "edge66", "@about": "#edge66"}, {"@length": 2.183937, "@source": "node50", "@target": "node68", "@id": "edge67", "@about": "#edge67"}, {"@length": 2.738746, "@source": "node68", "@target": "node69", "@id": "edge68", "@about": "#edge68"}, {"@length": 3.76505, "@source": "node69", "@target": "node70", "@id": "edge69", "@about": "#edge69"}, {"@length": 1.195053, "@source": "node70", "@target": "node71", "@id": "edge70", "@about": "#edge70"}, {"@length": 1.195053, "@source": "node70", "@target": "node72", "@id": "edge71", "@about": "#edge71"}, {"@length": 2.096595, "@source": "node69", "@target": "node73", "@id": "edge72", "@about": "#edge72"}, {"@length": 2.863508, "@source": "node73", "@target": "node74", "@id": "edge73", "@about": "#edge73"}, {"@length": 2.863508, "@source": "node73", "@target": "node75", "@id": "edge74", "@about": "#edge74"}, {"@length": 7.698849, "@source": "node68", "@target": "node76", "@id": "edge75", "@about": "#edge75"}, {"@length": 7.406465, "@source": "node49", "@target": "node77", "@id": "edge76", "@about": "#edge76"}, {"@length": 4.259779, "@source": "node77", "@target": "node78", "@id": "edge77", "@about": "#edge77"}, {"@length": 12.034313, "@source": "node78", "@target": "node79", "@id": "edge78", "@about": "#edge78"}, {"@length": 0.139073, "@source": "node79", "@target": "node80", "@id": "edge79", "@about": "#edge79"}, {"@length": 0.139073, "@source": "node79", "@target": "node81", "@id": "edge80", "@about": "#edge80"}, {"@length": 12.173386, "@source": "node78", "@target": "node82", "@id": "edge81", "@about": "#edge81"}, {"@length": 2.703471, "@source": "node77", "@target": "node83", "@id": "edge82", "@about": "#edge82"}, {"@length": 7.147998, "@source": "node83", "@target": "node84", "@id": "edge83", "@about": "#edge83"}, {"@length": 6.581696, "@source": "node84", "@target": "node85", "@id": "edge84", "@about": "#edge84"}, {"@length": 6.581696, "@source": "node84", "@target": "node86", "@id": "edge85", "@about": "#edge85"}, {"@length": 13.729694, "@source": "node83", "@target": "node87", "@id": "edge86", "@about": "#edge86"}, {"@length": 20.847812, "@source": "node5", "@target": "node6", "@id": "edge5", "@about": "#edge5"}, {"@length": 4.735557, "@source": "node6", "@target": "node40", "@id": "edge39", "@about": "#edge39"}, {"@length": 5.905645, "@source": "node40", "@target": "node41", "@id": "edge40", "@about": "#edge40"}, {"@length": 3.042146, "@source": "node41", "@target": "node42", "@id": "edge41", "@about": "#edge41"}, {"@length": 0.916251, "@source": "node42", "@target": "node43", "@id": "edge42", "@about": "#edge42"}, {"@length": 4.180208, "@source": "node43", "@target": "node44", "@id": "edge43", "@about": "#edge43"}, {"@length": 4.180208, "@source": "node43", "@target": "node45", "@id": "edge44", "@about": "#edge44"}, {"@length": 5.09646, "@source": "node42", "@target": "node46", "@id": "edge45", "@about": "#edge45"}, {"@length": 8.138605, "@source": "node41", "@target": "node47", "@id": "edge46", "@about": "#edge46"}, {"@length": 14.04425, "@source": "node40", "@target": "node48", "@id": "edge47", "@about": "#edge47"}, {"@length": 1.000984, "@source": "node6", "@target": "node7", "@id": "edge6", "@about": "#edge6"}, {"@length": 1.666138, "@source": "node7", "@target": "node29", "@id": "edge28", "@about": "#edge28"}, {"@length": 3.066499, "@source": "node29", "@target": "node30", "@id": "edge29", "@about": "#edge29"}, {"@length": 7.608959, "@source": "node30", "@target": "node31", "@id": "edge30", "@about": "#edge30"}, {"@length": 5.437226, "@source": "node31", "@target": "node32", "@id": "edge31", "@about": "#edge31"}, {"@length": 5.437226, "@source": "node31", "@target": "node33", "@id": "edge32", "@about": "#edge32"}, {"@length": 6.788238, "@source": "node30", "@target": "node34", "@id": "edge33", "@about": "#edge33"}, {"@length": 6.257947, "@source": "node34", "@target": "node35", "@id": "edge34", "@about": "#edge34"}, {"@length": 6.257947, "@source": "node34", "@target": "node36", "@id": "edge35", "@about": "#edge35"}, {"@length": 11.881214, "@source": "node29", "@target": "node37", "@id": "edge36", "@about": "#edge36"}, {"@length": 4.231469, "@source": "node37", "@target": "node38", "@id": "edge37", "@about": "#edge37"}, {"@length": 4.231469, "@source": "node37", "@target": "node39", "@id": "edge38", "@about": "#edge38"}, {"@length": 1.441957, "@source": "node7", "@target": "node8", "@id": "edge7", "@about": "#edge7"}, {"@length": 16.336865, "@source": "node8", "@target": "node28", "@id": "edge27", "@about": "#edge27"}, {"@length": 2.058107, "@source": "node8", "@target": "node9", "@id": "edge8", "@about": "#edge8"}, {"@length": 4.458611, "@source": "node9", "@target": "node19", "@id": "edge18", "@about": "#edge18"}, {"@length": 2.818218, "@source": "node19", "@target": "node20", "@id": "edge19", "@about": "#edge19"}, {"@length": 2.04929, "@source": "node20", "@target": "node21", "@id": "edge20", "@about": "#edge20"}, {"@length": 0.426885, "@source": "node21", "@target": "node22", "@id": "edge21", "@about": "#edge21"}, {"@length": 4.525754, "@source": "node22", "@target": "node23", "@id": "edge22", "@about": "#edge22"}, {"@length": 4.525754, "@source": "node22", "@target": "node24", "@id": "edge23", "@about": "#edge23"}, {"@length": 4.952639, "@source": "node21", "@target": "node25", "@id": "edge24", "@about": "#edge24"}, {"@length": 7.001929, "@source": "node20", "@target": "node26", "@id": "edge25", "@about": "#edge25"}, {"@length": 9.820147, "@source": "node19", "@target": "node27", "@id": "edge26", "@about": "#edge26"}, {"@length": 7.326797, "@source": "node9", "@target": "node10", "@id": "edge9", "@about": "#edge9"}, {"@length": 1.604212, "@source": "node10", "@target": "node11", "@id": "edge10", "@about": "#edge10"}, {"@length": 1.322068, "@source": "node11", "@target": "node12", "@id": "edge11", "@about": "#edge11"}, {"@length": 4.025682, "@source": "node12", "@target": "node13", "@id": "edge12", "@about": "#edge12"}, {"@length": 4.025682, "@source": "node12", "@target": "node14", "@id": "edge13", "@about": "#edge13"}, {"@length": 2.775278, "@source": "node11", "@target": "node15", "@id": "edge14", "@about": "#edge14"}, {"@length": 2.572472, "@source": "node15", "@target": "node16", "@id": "edge15", "@about": "#edge15"}, {"@length": 2.572472, "@source": "node15", "@target": "node17", "@id": "edge16", "@about": "#edge16"}, {"@length": 6.951961, "@source": "node10", "@target": "node18", "@id": "edge17", "@about": "#edge17"}, {"@length": 61.743839, "@source": "node4", "@target": "node88", "@id": "edge87", "@about": "#edge87"}, {"@length": 51.696653, "@source": "node3", "@target": "node89", "@id": "edge88", "@about": "#edge88"}, {"@length": 17.023443, "@source": "node89", "@target": "node90", "@id": "edge89", "@about": "#edge89"}, {"@length": 17.023443, "@source": "node89", "@target": "node91", "@id": "edge90", "@about": "#edge90"}, {"@length": 90.950244, "@source": "node2", "@target": "node92", "@id": "edge91", "@about": "#edge91"}, {"@length": 3.854312, "@source": "node92", "@target": "node93", "@id": "edge92", "@about": "#edge92"}, {"@length": 3.854312, "@source": "node92", "@target": "node94", "@id": "edge93", "@about": "#edge93"}], "@id": "tree1", "@about": "#tree1", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:branchLengthDescription", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:branchLengthMode", "@datatype": "xsd:string", "$": "ot:undefined"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:curatedType", "@datatype": "xsd:string", "$": "Bayesian inference "}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:inGroupClade", "@datatype": "xsd:string", "$": "node4"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:nodeLabelMode", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:nodeLabelTimeUnit", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:outGroupEdge", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:specifiedRoot", "@datatype": "xsd:string", "$": "tree1_ROOT"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:unrootedTree", "@datatype": "xsd:boolean", "$": false}]}], "@about": "#trees1"}, "meta": [{"agent": [{"@description": "Open Tree NexSON validation", "@id": "peyotl-validator", "@name": "api.opentreeoflife.org/validate", "@url": "https://github.com/OpenTreeOfLife/peyotl", "@version": "0.0.4a", "invocation": {"commandLine": [], "otherProperty": [{"name": "pythonVersion", "value": "2.7.9"}, {"name": "pythonImplementation", "value": "CPython"}]}, "@about": "#peyotl-validator"}, {"@description": "Web-based interface for submitting, editing, and reviewing studies in the Open Tree of Life project.", "@id": "opentree-curation-webapp", "@name": "OpenTree curation webapp", "@url": "https://github.com/OpenTreeOfLife/opentree", "@version": "0.0.0", "@about": "#opentree-curation-webapp"}], "@xsi:type": "nex:LiteralMeta", "@property": "ot:agents"}, {"annotation": [{"@dateCreated": "2016-10-22T16:23:47.401Z", "@description": "Aids for mapping study OTUs to OTT taxa", "@id": "otu-mapping-hints", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "OTU_MAPPING_HINTS", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"searchContext": {"$": "All life"}, "substitutions": {"substitution": [{"@active": false, "@valid": true, "new": {"$": ""}, "old": {"$": ""}}]}, "useFuzzyMatching": false}, "refersTo": {"@top": {"$": "meta"}}}], "@about": "#otu-mapping-hints"}, {"@dateCreated": "2016-10-22T16:23:47.401Z", "@description": "Describes supporting data files for this study", "@id": "supporting-files-metadata", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "SUPPORTING_FILE_INFO", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"@movedToPermanentArchive": false, "files": {"file": [{"@filename": "Holocentridae.txt", "@size": 2861, "@type": "newick", "@url": "/curator/download/supporting_files.doc.90faeed0aec12a98.486f6c6f63656e7472696461652e747874.txt", "description": {"$": "Source data for tree(s) 'tree1'"}, "sourceForTree": [{"$": "tree1"}]}, {"@filename": "Holocentridae.txt", "@size": 2869, "@type": "newick", "@url": "/curator/download/supporting_files.doc.add0bb9651cd0537.486f6c6f63656e7472696461652e747874.txt", "description": {"$": "Source data for tree(s) 'tree1'"}, "sourceForTree": [{"$": "tree1"}]}]}}, "refersTo": {"@top": {"$": "meta"}}}], "@about": "#supporting-files-metadata"}, {"@id": "peyotl-validator-event", "@description": "Open Tree NexSON validation", "@wasAssociatedWithAgentId": "peyotl-validator", "@passedChecks": true, "@preserve": false, "message": [{"@code": "MULTIPLE_TIPS_MAPPED_TO_OTT_ID", "data": ["otu1", "otu10", "otu11", "otu12", "otu13", "otu14", "otu15", "otu16", "otu17", "otu18", "otu19", "otu2", "otu20", "otu21", "otu22", "otu24", "otu26", "otu27", "otu28", "otu29", "otu3", "otu30", "otu31", "otu32", "otu33", "otu34", "otu35", "otu36", "otu37", "otu38", "otu39", "otu4", "otu40", "otu41", "otu42", "otu43", "otu44", "otu45", "otu46", "otu48", "otu5", "otu6", "otu7", "otu8", "otu9"], "refersTo": {"@top": "otus", "@idref": "otus1", "@otusID": "otus1"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:comment"], "refersTo": {"@top": "nexml", "@idref": "study"}, "@severity": "WARNING"}, {"@code": "MISSING_OPTIONAL_KEY", "data": ["^ot:branchLengthTimeUnit"], "refersTo": {"@top": "trees", "@idref": "tree1", "@treesID": "trees1", "@treeID": "tree1"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:nodeLabelMode", "^ot:nodeLabelTimeUnit"], "refersTo": {"@top": "trees", "@idref": "tree1", "@treesID": "trees1", "@treeID": "tree1"}, "@severity": "WARNING"}, {"@code": "MISSING_OPTIONAL_KEY", "data": ["^ot:ottId"], "refersTo": {"@top": "otus", "@idref": ["otu1", "otu10", "otu11", "otu12", "otu13", "otu14", "otu15", "otu16", "otu17", "otu18", "otu19", "otu2", "otu20", "otu21", "otu22", "otu24", "otu26", "otu27", "otu28", "otu29", "otu3", "otu30", "otu31", "otu32", "otu33", "otu34", "otu35", "otu36", "otu37", "otu38", "otu39", "otu4", "otu40", "otu41", "otu42", "otu43", "otu44", "otu45", "otu46", "otu48", "otu5", "otu6", "otu7", "otu8", "otu9"], "@otusID": "otus1", "@otuID": ["otu1", "otu10", "otu11", "otu12", "otu13", "otu14", "otu15", "otu16", "otu17", "otu18", "otu19", "otu2", "otu20", "otu21", "otu22", "otu24", "otu26", "otu27", "otu28", "otu29", "otu3", "otu30", "otu31", "otu32", "otu33", "otu34", "otu35", "otu36", "otu37", "otu38", "otu39", "otu4", "otu40", "otu41", "otu42", "otu43", "otu44", "otu45", "otu46", "otu48", "otu5", "otu6", "otu7", "otu8", "otu9"]}, "@severity": "WARNING"}], "@about": "#peyotl-validator-event"}], "@xsi:type": "nex:LiteralMeta", "@property": "ot:annotationEvents"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:candidateTreeForSynthesis", "@datatype": "xsd:string", "$": "tree1"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:comment", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:curatorName", "@datatype": "xsd:string", "$": "Charlene &quot;Charlie&quot; McCord"}, {"@href": "", "@xsi:type": "nex:ResourceMeta", "@rel": "ot:dataDeposit"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:focalCladeOTTTaxonName", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:notIntendedForSynthesis", "@datatype": "xsd:boolean", "$": false}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:studyId", "@datatype": "xsd:string", "$": "ot_988"}, {"@href": "http://dx.doi.org/10.1111/evo.12562", "@xsi:type": "nex:ResourceMeta", "@rel": "ot:studyPublication"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:studyPublicationReference", "@datatype": "xsd:string", "$": "Alex Dornburg, Jon Moore, Jeremy M. Beaulieu, Ron I. Eytan, Thomas J. Near, 2014, 'The impact of shifts in marine biodiversity hotspots on patterns of range evolution: Evidence from the Holocentridae (squirrelfishes and soldierfishes)', Evolution, vol. 69, no. 1, pp. 146-161"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:studyYear", "@datatype": "xsd:int", "$": 2014}]}}, "branch2sha": {"master": "c33806c9ee11db205ee8c02a42e31b1c3128e299"}, "commentHTML": "", "duplicateStudyIDs": [], "shardName": "phylesystem-1", "versionHistory": [{"id": "1b89329f64a83f16c57f02c1694f8701103df48f", "author_name": "Charlene &quot;Charlie&quot; McCord", "author_email": "charlene.l.mccord@gmail.com", "date": "Sat, 22 Oct 2016 16:31:47 +0000", "date_ISO_8601": "2016-10-22 16:31:47 +0000", "relative_date": "9 years ago", "message_subject": "Update document 'ot_988' via OpenTree API"}, {"id": "47ea144391c970500a54e4ebc452b112bacfee5d", "author_name": "Charlene &quot;Charlie&quot; McCord", "author_email": "charlene.l.mccord@gmail.com", "date": "Sat, 22 Oct 2016 16:30:29 +0000", "date_ISO_8601": "2016-10-22 16:30:29 +0000", "relative_date": "9 years ago", "message_subject": "Update document 'ot_988' via OpenTree API"}, {"id": "7f1479e0292b918ee8d690d9d5109ec3e57a273f", "author_name": "Charlene &quot;Charlie&quot; McCord", "author_email": "charlene.l.mccord@gmail.com", "date": "Sat, 22 Oct 2016 16:30:03 +0000", "date_ISO_8601": "2016-10-22 16:30:03 +0000", "relative_date": "9 years ago", "message_subject": "Update document 'ot_988' via OpenTree API"}, {"id": "cad06dda8c44c9cd81c6271f376e9c96c8e75371", "author_name": "Charlene &quot;Charlie&quot; McCord", "author_email": "charlene.l.mccord@gmail.com", "date": "Sat, 22 Oct 2016 16:23:46 +0000", "date_ISO_8601": "2016-10-22 16:23:46 +0000", "relative_date": "9 years ago", "message_subject": "Update document 'ot_988' via OpenTree API"}]}