--embed --agent-only pythonVersion 2.7.5+ pythonImplementation CPython ^ot:ottId otu239245 otu239358 otu239249 otu239420 otu239250 otu239253 otu239263 otu239412 otu239286 otu239345 otu239291 otu239340 otu239308 otu239398 otu239311 otu239318 otu239313 otu239332 otu239324 otu239366 otu239326 otu239336 otu239333 otu239380 otu239352 otu239360 otu239359 otu239421 otu239368 otu239384 otu239370 otu239404 tree2572 bryan drew 56601 Marchantiophyta pg_1278 Forrest L., Davis E., Long D., Crandall-stotler B., Clark A., & Hollingsworth M. 2006. Unraveling the evolutionary history of the liverworts (Marchantiophyta): multiple taxa, genomes and analyses. The Bryologist, 109(3): 303-334. 2006 ingroup added; Equisetum telmateia 93158 Equisetum telmateia Tl13815 Porella pinnata 802658 Porella pinnata Tl16577 Polytrichum pallidisetum 569917 Polytrichastrum pallidisetum Tl16579 Sphagnum palustre 738988 Sphagnum palustre Tl16589 Andreaeobryum macrosporum 777047 Andreaeobryum macrosporum Tl16601 Dendrohypopterygium arbuscula 173043 Arbusculohypopterygium arbusculum Tl174019 Takakia lepidozioides 79112 Takakia lepidozioides Tl174041 Hookeria lucens 148621 Hookeria lucens Tl174057 Mnium hornum 199298 Mnium hornum Tl174105 Marchantia polymorpha 56596 Marchantia polymorpha Tl174106 Psilotum nudum 144810 Psilotum nudum Tl174117 Chlamydomonas reinhardtii 33153 Chlamydomonas reinhardtii Tl174132 Nephroselmis olivacea 439268 Nephroselmis olivacea Tl174146 Haplomitrium mnioides 751925 Haplomitrium mnioides Tl32707 Marsupella emarginata 3224 Marsupella emarginata Tl32708 Ricciocarpos natans Australia 108927 Ricciocarpos natans Tl32709 Anastrophyllum michauxii 407370 Anastrophyllum michauxii Tl32710 Adelanthus lindenbergianus 118241 Adelanthus lindenbergianus Tl32711 Acrolejeunea fertilis 234491 Acrolejeunea fertilis Tl32712 Radula complanata 692281 Radula complanata Tl32713 Odontolejeunea lunulata 38188 Odontolejeunea lunulata Tl32714 Nowellia curvifolia 94643 Nowellia curvifolia Tl32715 Symphyogyna brongniartii 108923 Symphyogyna brongniartii Tl32716 Asterella africana 753448 Asterella africana Tl32717 Weisnerella denudata 753432 Wiesnerella denudata Tl32718 Jubulopsis novaezelandiae 385868 Jubulopsis novae-zelandiae Tl32719 Jubula pennsylvanica 751936 Jubula hutchinsiae subsp. pennsylvanica Tl32720 Fossombronia foveolata 126784 Fossombronia foveolata Tl32721 Takakia ceratophylla 3228 Takakia ceratophylla Tl32722 Monoclea gottschei Long et al. 177582 Monoclea gottschei Tl32723 Schiffneria hyalina 952917 Schiffneria hyalina Tl32724 Bryopteris filicina 367054 Bryopteris filicina Tl32725 Stenorrhipis madagascariensis 43003 Kymatocalyx madagascariensis Tl32726 Targionia hypophylla CA 311663 Targionia hypophylla Tl32727 Haplomitrium andinum Tl32728 Austrofossombronia australis 969282 Austrofossombronia australis Tl32729 Pellia endiviifolia 431620 Pellia endiviifolia Tl32730 Greeneothallus gemmiparus Tl32731 Mannia androgyna 258853 Mannia androgyna Tl32732 Marchantia inflexa 15887 Marchantia inflexa Tl32733 Plagiochasma wrightii 258849 Plagiochasma wrightii Tl32734 Herbertus sakurai 34002 Herbertus sakurai Tl32735 Symphyogyna aspera 890929 Symphyogyna aspera Tl32736 Schistochila appendiculata 961872 Schistochila appendiculata Tl32737 Pallavicinia xiphoides 283283 Pallavicinia xiphoides Tl32738 Anthoceros punctatus 769687 Anthoceros punctatus Tl32739 Trichocolea tomentosa 34009 Trichocolea tomentosa Tl32740 Neohodgsonia mirabilis DL 702600 Neohodgsonia mirabilis Tl32741 Plagiochila austinii 896856 Plagiochila austinii Tl32742 Makinoa crispata 177577 Makinoa crispata Tl32743 Triandrophyllum subtrifidum 952908 Triandrophyllum subtrifidum Tl32744 Temnoma pulchellum 103536 Temnoma pulchellum Tl32745 Moerckia flotoviana 693245 Moerckia flotoviana Tl32746 Anthoceros angustus 539796 Anthoceros angustus Tl32747 Pallavicinia lyellii ARK 177575 Pallavicinia lyellii Tl32748 Pallavicinia rubristipa 962859 Pallavicinia rubristipa Tl32749 Apotreubia nana 916267 Apotreubia nana Tl32750 Jubula hutchinsiae 553043 Jubula hutchinsiae Tl32751 Frullania moniliata 293322 Frullania moniliata Tl32752 Mastigophora diclados 94620 Mastigophora diclados Tl32753 Calycularia crispula 443123 Calycularia crispula Tl32754 Austrofossombronia peruviana 979596 Austrofossombronia peruviana Tl32755 Jungermannia exsertifolia 94623 Jungermannia exsertifolia Tl32756 Chara connivens 245314 Chara connivens Tl32757 Peltolepis quadrata 182282 Peltolepis quadrata Tl32758 Lepicolea ochroleuca 160473 Lepicolea ochroleuca Tl32759 Phymatoceros bulbiculosus 491883 Phymatoceros bulbiculosus Tl32760 Diplophyllum obtusifolium 831945 Diplophyllum obtusifolium Tl32761 Herbertus subdentatus 369282 Herbertus subdentatus Tl32762 Metzgeria conjugata 454396 Metzgeria conjugata Tl32763 Pellia epiphylla NC 231495 Pellia epiphylla Tl32764 Monoselenium tenerum 230405 Monosolenium tenerum Tl32765 Mastigolejeunea auriculata 1028712 Mastigolejeunea auriculata Tl32766 Nardia insecta 367800 Nardia insecta Tl32767 Schistochila lehmanniana 896885 Schistochila lehmanniana Tl32768 Preissia quadrata USA 683244 Preissia quadrata Tl32769 Mannia fragrans 753436 Mannia fragrans Tl32770 Neotrichocolea bisset 3855640 Neotrichocolea bisseti Tl32771 Conocephalum conicum 199292 Conocephalum conicum Tl32772 Riella helicophylla 160020 Riella helicophylla Tl32773 Ptilidium ciliare 692283 Ptilidium ciliare Tl32774 Chiloscyphys polyanthos 663872 Chiloscyphus polyanthos Tl32775 Riccia fluitans IOWA 851187 Riccia fluitans Tl32776 Fossombronia sp. ined. 1002117 Fossombronia sp. Stotler & Crandall-Stotler 3940 Tl32777 Cryptomitrium himalayense 258840 Cryptomitrium himalayense Tl32778 Xenothallus vulcanicolus 319034 Xenothallus vulcanicola Tl32779 Balantiopsis diplophylla 669012 Balantiopsis diplophylla Tl32780 Symphyogyna undulata 431612 Symphyogyna undulata Tl32781 Pellia appalachiana 431621 Pellia appalachiana Tl32782 Riccardia multifida 639856 Riccardia multifida Tl32783 Sauteria alpina 753440 Sauteria alpina Tl32784 Sphagnum cuspidatum 851191 Sphagnum cuspidatum Tl32785 Pleurozia purpurea Bhutan 33997 Pleurozia purpurea Tl32786 Marchantia chenopoda 258847 Marchantia chenopoda Tl32787 Haplomitrium blumei 186267 Haplomitrium blumei Tl32788 Blasia pusilla NC 756399 Blasia pusilla Tl32789 Phyllothallia nivicola 969284 Phyllothallia nivicola Tl32790 Haplomitrium gibbsiae Mt Arthur 722575 Haplomitrium gibbsiae Tl32791 Gackstroemia weindorferi 34004 Gackstroemia weindorferi Tl32792 Symphyogyna hymenophyllum 770042 Symphyogyna hymenophyllum Tl32793 Jensenia connivens 639853 Jensenia connivens Tl32794 Lethocolea glossophylla 43008 Lethocolea glossophylla Tl32795 Blasia pusilla DUKE 756399 Blasia pusilla Tl32796 Lepicolea rara 94627 Lepicolea rara Tl32797 Marchantia paleacea 565727 Marchantia paleacea Tl32798 Treubia pygmaea 884920 Treubia pygmaea Tl32799 Herzogobryum teres 257370 Herzogobryum teres Tl32800 Cephaloziella hirta 407183 Cephaloziella hirta Tl32801 Noteroclada confluens Argentina 158889 Noteroclada confluens Tl32802 Corsinia coriandrina 386618 Corsinia coriandra Tl32803 Scapania nemorea IL 851174 Scapania nemorea Tl32804 Megaceros flagellaris 639745 Megaceros flagellaris Tl32805 Frullania albertii 1090193 Frullania albertii Tl32806 Telaranea pulcherrima 669010 Telaranea pulcherrima Tl32808 Podomitrium malaccense 504247 Podomitrium malaccense Tl32809 Riccia ciliifera 469985 Riccia ciliifera Tl32810 Haplomitrium gibbsiae DUKE 722575 Haplomitrium gibbsiae Tl32811 Haplomitrium hookeri USA 27568 Haplomitrium hookeri Tl32812 Cyathodium tuberosum 258851 Cyathodium tuberosum Tl32813 Riccardia capillacea 431618 Riccardia capillacea Tl32814 Scapania nemorosa DUKE 851174 Scapania nemorea Tl32815 Metzgeria furcata 985292 Metzgeria furcata Tl32816 Monoclea gottschei elongata 224260 Monoclea gottschei subsp. elongata Tl32817 Metzgeria liebmanniana 504249 Metzgeria liebmanniana Tl32818 Preissia quadrata Scotland 683244 Preissia quadrata Tl32819 Diplophyllum albicans 1055640 Diplophyllum albicans Tl32820 Hymenophyton leptopodum 1018206 Hymenophyton leptopodum Tl32821 Reboulia hemisphaerica 985279 Reboulia hemisphaerica Tl32822 Metzgeria fruticola 34000 Metzgeria sp. Davis 361 Tl32823 Pellia epiphylla DUKE 231495 Pellia epiphylla Tl32824 Verdoornia succulenta 639852 Verdoornia succulenta Tl32825 Fossombronia pusilla 790142 Fossombronia pusilla Tl32826 Lejeunea cladogyna 94629 Lejeunea cladogyna Tl32827 Jungermannia crenuliformis 94621 Jungermannia crenuliformis Tl32828 Anthelia julacea 360418 Anthelia julacea Tl32829 Isotachis lyallii 34001 Isotachis lyallii Tl32830 Dumortiera hirsuta USA 126782 Dumortiera hirsuta Tl32831 Acromastigum exile 616061 Acromastigum exile Tl32832 Cheilolejeunea trifaria 870940 Cheilolejeunea trifaria Tl32833 Allisonia cockaynii 443128 Allisonia cockaynii Tl32834 Gyrothyra underwoodiana 1063369 Gyrothyra underwoodiana Tl32835 Jungermannia leiantha 985272 Jungermannia leiantha Tl32836 Monoclea gottschei Shaw 177582 Monoclea gottschei Tl32837 Aneura pinguis Russia 818064 Aneura pinguis Tl32838 Dumortiera hirsuta Mexico 126782 Dumortiera hirsuta Tl32839 Apometzgeria frontipilis 616065 Metzgeria frontipilis Tl32840 Myriocolea irrorata 80698 Colura irrorata Tl32841 Treubia lacunosa 54762 Treubia lacunosa Tl32842 Bazzania affinis 1090202 Bazzania affinis Tl32843 Athalamia hyalina 182277 Athalamia hyalina Tl32844 Noteroclada confluens Venezuela 158889 Noteroclada confluens Tl32845 Cyclolejeunea convexistipa 669005 Cyclolejeunea convexistipa Tl32846 Sphaerocarpos texanus IL 548796 Sphaerocarpos texanus Tl32847 Ceratolejeunea coarina 34006 Ceratolejeunea coarina Tl32848 Lunularia cruciata Scotland 177579 Lunularia cruciata Tl32849 Cavicularia densa 443125 Cavicularia densa Tl32850 Harpanthus scutatus 257376 Harpanthus scutatus Tl32851 Plagiochasma rupestre 108918 Plagiochasma rupestre Tl32852 Gymnomitrion concinnatum 1024369 Gymnomitrion concinnatum Tl32853 Lophocolea appalachianus 407186 Chiloscyphus appalachianus Tl32854 Lepicolea attenuata 66639 Lepicolea attenuata Tl32855 Lophocolea heterophylla 246574 Lophocolea heterophylla Tl32856 Hattorianthus erimonus 443120 Hattorianthus erimonus Tl32857 Riccia huebeneriana 233165 Riccia huebeneriana Tl32858 Haplomitrium hookeri Scotland 27568 Haplomitrium hookeri Tl32859 Conocephalum salebrosum 504251 Conocephalum salebrosum Tl32860 Odontoschisma denudatum 33998 Odontoschisma denudatum Tl32861 Podomitrium phyllanthus 969286 Podomitrium phyllanthus Tl32862 Sphaerocarpos texanus DUKE 548796 Sphaerocarpos texanus Tl32863 Cephaloziella varians 247516 Cephaloziella varians Tl32864 Nardia scalaris 94644 Nardia scalaris Tl32865 Radula perrottetii 896868 Radula perrottetii Tl32866 Fossombronia angulosa 969276 Fossombronia angulosa Tl32867 Riccardia fucoides 78921 Riccardia fucoides Tl32868 Athalamia pingius 258838 Athalamia pinguis Tl32869 Marsupidium latifolium 34007 Marsupidium latifolium Tl32870 Lepidozia reptans 751942 Lepidozia reptans Tl32871 Goebeliella cornigera 6539 Goebeliella cornigera Tl32872 Tetralophozia setiformis 257580 Tetralophozia setiformis Tl32873 Jensenia spinosa 962842 Jensenia spinosa Tl32874 Moerckia blyttii 652683 Moerckia blyttii Tl32875 Conocephalum japonicum 621608 Conocephalum japonicum Tl32876 Pleurozia purpurea USA 33997 Pleurozia purpurea Tl32878 Asterella grollei 471893 Asterella grollei Tl32879 Apometzgeria pubescens 1080901 Metzgeria pubescens Tl32880 Calypogeia muelleriana 126779 Calypogeia muelleriana Tl32881 Leiocolea heterocolpos 672325 Mesoptychia heterocolpos Tl32882 Petalophyllum ralfsii 802662 Petalophyllum ralfsii Tl32883 Lunularia cruciata Mexico 177579 Lunularia cruciata Tl32884 Tritomaria quinquedentata 831953 Tritomaria quinquedentata Tl32885 Asterella wallichiana 1048484 Asterella wallichiana Tl32886 Andreaea rothii 449331 Andreaea rothii Tl32887 Leiosporoceros dussii 118110 Leiosporoceros dussii Tl32888 Herbertus oldfieldianus 337029 Herbertus oldfieldianus Tl32889 Cephalozia catenulata 669008 Cephalozia catenulata Tl32890 Frullania eboracensis 431616 Frullania eboracensis Tl32891 Neohodgsonia mirabilis 702600 Neohodgsonia mirabilis Tl32892 Jungermannia subelliptica 367803 Jungermannia subelliptica Tl32893 Hymenophyton flabellatum 220656 Hymenophyton flabellatum Tl32894 Lepidolaena clavigera 80971 Lepidolaena clavigera Tl32895 Ascidiota blepharophylla 360422 Ascidiota blepharophylla Tl32896 Isotachis multiceps 293330 Isotachis multiceps Tl32897 Exormotheca pustulosa 230401 Exormotheca pustulosa Tl32898 Porella navicularis 652684 Porella navicularis Tl32899 Targionia hypophylla Portugal 311663 Targionia hypophylla Tl32900 Aneura pinguis WN 818064 Aneura pinguis Tl32901 Drepanolejeunea biocellata 861903 Drepanolejeunea biocellata Tl32902 Cryptothallus mirabilis 257397 Aneura mirabilis Tl32903 Lobatiriccardia lobata 652686 Lobatiriccardia lobata Tl32904 Chlorella vulgaris 804978 Chlorella vulgaris Tl4897 Fig. 2 node580266 node580264 false true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true