--embed --agent-only pythonVersion 2.7.5+ pythonImplementation CPython false Mammals false ^ot:isTaxonExemplar ^ot:isTaxonExemplar ^ot:ottId otu264509 otu264636 ^ot:comment highestMintedElementIDs ^ot:nodeLabelMode ^ot:nodeLabelTimeUnit ^ot:reasonsToExcludeFromSynthesis tree3231 Looks like the Fig 2 tree from TreeBASE doesn't match the Figure in the article. See [https://github.com/OpenTreeOfLife/feedback/issues/89]() . Emailed authors re:discrepancy. Chris Owen Karen Cranston Joseph W. Brown Emily Jane McTavish 913935 Primates pg_1600 Perelman, P., Johnson W.E., Roos C., Seuánez H.N., Horvath J.E., Moreira M.A., Kessing B.D., Pontius J., Roelke M., Rumpler Y., Schneider M.C., Silva A., O'brien S., & Pecon-slattery J. 2011. A Molecular Phylogeny of Living Primates. PLoS Genetics 7(3): e1001342. 2011 Lepilemur jamesi LJA 1 3428 Lepilemur jamesi Tl677519 Cercopithecus cephus CCE 1 268334 Cercopithecus cephus Tl677520 Mirza zaza MCE 1 534565 Mirza zaza Tl677521 Propithecus edwardsi PED 1 571030 Propithecus edwardsi Tl677522 Lepilemur dorsalis LDO 1 231275 Lepilemur dorsalis Tl677523 Lagothrix cana LAC 2 968680 Lagothrix cana Tl677524 Cebus xanthosternos CXA 1 331561 Cebus xanthosternos Tl677525 Propithecus verreauxi coquereli PVC 2 402626 Propithecus coquereli Tl677526 Hapalemur occidentalis HOC 1 311692 Hapalemur occidentalis Tl677527 Aotus azarae infulatus AZI 1 210732 Aotus azarai infulatus Tl677528 Varecia variegata rubra VVA 7 462792 Varecia rubra Tl677529 Eulemur macaco flavifrons EMC 5 114057 Eulemur flavifrons Tl677530 Propithecus tattersalli PTA 1 311205 Propithecus tattersalli Tl677531 Lepilemur ankaranensis LAN 1 414211 Lepilemur ankaranensis Tl677532 Lophocebus albigena LAA 1 554556 Lophocebus albigena Tl677533 Ateles belzebuth ABZ 1 791705 Ateles belzebuth Tl677534 Callithrix aurita CAI 1 341886 Callithrix aurita Tl677535 Mico humeralifer MHU 1 683993 Callithrix humeralifera Tl677536 Nomascus leucogenys HCO 3 1029454 Nomascus leucogenys Tl677537 Lepilemur ruficaudatus LER 1 230531 Lepilemur ruficaudatus Tl677538 Hapalemur griseus HGR 1 789630 Hapalemur griseus Tl677539 Saguinus mystax SMY 3 1015219 Saguinus mystax Tl677540 Trachypithecus delacouri TDE 1 48788 Trachypithecus delacouri Tl677541 Cebus apella CAP 13 197026 Cebus apella Tl677542 Arctocebus calabarensis ACL 1 323051 Arctocebus calabarensis Tl677543 Cercopithecus hamlyni hamlyni CHH 1 311700 Cercopithecus hamlyni hamlyni Tl677544 Brachyteles hypoxanthus BHY 1 574171 Brachyteles hypoxanthus Tl677545 Trachypithecus hatinhensis THA 1 1038626 Trachypithecus hatinhensis Tl677546 Papio hamadryas PHM 1 115463 Papio hamadryas Tl677547 Published figure does not match tree. Pan troglodytes verus PTR 104 Tl677548 Symphalangus syndactylus SSY 2 417961 Symphalangus syndactylus Tl677549 Callithrix geoffroyi CGE 4 683989 Callithrix geoffroyi Tl677550 Trachypithecus vetulus monticola TVV 2 721477 Trachypithecus vetulus Tl677551 Otolemur garnetti GGR 2 885705 Otolemur garnettii Tl677552 Macaca nigra MNG 3 111862 Macaca nigra Tl677553 Microcebus murinus subspecies2 MMR 2 311211 Microcebus murinus Tl677554 Alouatta caraya ACA 3 791697 Alouatta caraya Tl677555 Papio anubis PAN 10 115449 Papio anubis Tl677556 Brachyteles arachnoides BAR 1 1058645 Brachyteles arachnoides Tl677557 Chlorocebus cynosuros CAE 4 250767 Chlorocebus cynosuros Tl677558 Tupaia glis TGL 4 574727 Tupaia glis Tl677559 Alouatta sara ASA 1 814670 Alouatta sara Tl677560 Pan paniscus PPN 8 158484 Pan paniscus Tl677561 Macaca arctoides MAC 1 689665 Macaca arctoides Tl677562 Eulemur mongoz EMO 1 696004 Eulemur mongoz Tl677563 Tupaia minor TMI 1 67360 Tupaia minor Tl677564 Callicebus coimbrai CCO 1 210726 Callicebus coimbrai Tl677565 Hylobates lar HLA 1 995038 Hylobates lar Tl677566 Nomascus gabriellae NGA 2 847446 Nomascus gabriellae Tl677567 Erythrocebus patas EPA 9 268326 Erythrocebus patas Tl677568 Galago thomasi GTH 1 202831 Galago thomasi Tl677569 Callicebus caligatus CCG 1 210729 Callicebus caligatus Tl677570 Pygathrix cinerea PCN 2 786 Pygathrix cinerea Tl677571 Cercopithecus lhoesti CIH 1 954691 Cercopithecus lhoesti Tl677572 Lemur catta LCT 10 913930 Lemur catta Tl677573 Macaca tonkeana MTO 6 407753 Macaca tonkeana Tl677574 Macaca ochreata Moc 1 575293 Macaca ochreata Tl677575 Cheirogaleus medius CMD 1 863759 Cheirogaleus medius Tl677576 Daubentonia madagascariensis DMD 5 50727 Daubentonia madagascariensis Tl677577 Varecia variegata variegata VVA 2 114058 Varecia variegata variegata Tl677578 Tarsius bancanus TBA 1 339050 Tarsius bancanus Tl677579 Leontopithecus chrysomelas LCH 1 341890 Leontopithecus chrysomelas Tl677580 Propithecus diadema PDI 2 979430 Propithecus diadema Tl677581 Cercopithecus wolfi wolfi CWW 1 311699 Cercopithecus wolfi wolfi Tl677582 Semnopithecus entellus entellus SEE 1 1038629 Semnopithecus entellus entellus Tl677583 Saguinus bicolor SBI 1 254273 Saguinus bicolor Tl677584 Pongo pygmaeus PPY 157 770302 Pongo pygmaeus Tl677585 Propithecus verreauxi PVE 1 696018 Propithecus verreauxi Tl677586 Tarsius syrichta TSY 1 339031 Tarsius syrichta Tl677587 Pithecia irrorata PIR 1 1058640 Pithecia irrorata Tl677588 Mandrillus sphinx MSP 12 741047 Mandrillus sphinx Tl677589 Ateles fusciceps AFC 7 791687 Ateles fusciceps Tl677590 Leontopithecus rosalia LRO 244 921451 Leontopithecus rosalia Tl677591 Eulemur collaris EFL 15 589604 Eulemur fulvus collaris Tl677592 Saguinus fuscicollis SFU 6 1015238 Saguinus fuscicollis Tl677593 Theropithecus gelada TGE 2 741053 Theropithecus gelada Tl677594 Nomascus siki NSI 1 995043 Nomascus siki Tl677595 Hylobates muelleri HMU 6 995050 Hylobates muelleri Tl677596 Cercopithecus mitis CMT 1 203191 Cercopithecus mitis Tl677597 Hylobates agilis HAG 6 166550 Hylobates agilis Tl677598 Saguinus imperator SIM 2 489221 Saguinus imperator Tl677599 Callithrix jacchus CJA 1 1015223 Callithrix jacchus Tl677600 Eulemur rufus ERF 1 22554 Eulemur rufus Tl677601 Piliocolobus badius PBD 1 640572 Piliocolobus badius Tl677602 Aotus lemurinus griseimembra ALM 1 583084 Aotus griseimembra Tl677603 Macaca maura MCA 1 169928 Macaca maura Tl677604 Pithecia pithecia PPT 1 235545 Pithecia pithecia Tl677605 Cebus capucinus CCP 3 217252 Cebus capucinus Tl677606 Saimiri oerstedii oerstedii SOO 1 737540 Saimiri oerstedii oerstedii Tl677607 Callicebus moloch CMH 1 842880 Callicebus moloch Tl677608 Mico argentatus CAR 1 3607887 Mico argentatus Tl677609 Alouatta belzebul ABE 1 1058654 Alouatta belzebul Tl677610 Saguinus oedipus SOE 3 489218 Saguinus oedipus Tl677611 Lophocebus aterrimus LAT 2 554550 Lophocebus aterrimus Tl677612 Cercopithecus albogularis kolbi CAB 1 311701 Cercopithecus albogularis kolbi Tl677613 Nycticebus coucang NCO 2 339043 Nycticebus coucang Tl677614 Otolemur crassicaudatus OCR 1 863763 Otolemur crassicaudatus Tl677615 Macaca sylvanus MSY 3 689645 Macaca sylvanus Tl677616 Cercopithecus neglectus CNE 1 918233 Cercopithecus neglectus Tl677617 Allenopithecus nigroviridis ANI 1 721471 Allenopithecus nigroviridis Tl677618 Galago senegalensis GSE 1 863751 Galago senegalensis Tl677619 Cercopithecus diana CDA 3 203187 Cercopithecus diana Tl677620 Eulemur fulvus EFL 4 394961 Eulemur fulvus Tl677621 Eulemur macaco EMC 1 763521 Eulemur macaco Tl677622 Perodicticus potto PEP 2 339040 Perodicticus potto Tl677623 Cacajao calvus CCL 1 1058649 Cacajao calvus Tl677624 Macaca thibetana MTH 3 111859 Macaca thibetana Tl677625 Semnopithecus hector SHE 1 737534 Semnopithecus hector Tl677626 Saguinus labiatus SLA 1 68899 Saguinus labiatus Tl677627 Pongo abelii PPY 155 770295 Pongo abelii Tl677628 Callithrix kuhlii CKU 1 947308 Callithrix kuhlii Tl677629 Ateles chamek ACM 1 814889 Ateles belzebuth chamek Tl677630 Colobus polykomos CPO 2 989400 Colobus polykomos Tl677631 Trachypithecus francoisi TFR 1 43805 Trachypithecus francoisi Tl677632 Pan troglodytes troglodytes PTR 60 767875 Pan troglodytes troglodytes Tl677633 Nasalis larvatus NLA 2 860954 Nasalis larvatus Tl677634 Callicebus nigrifrons CNI 1 210741 Callicebus nigrifrons Tl677635 Callicebus personatus CLP 1 546503 Callicebus personatus Tl677636 Trachypithecus obscurus TOB 4 43798 Trachypithecus obscurus Tl677637 Callicebus donacophilus CDO 1 282614 Callicebus donacophilus Tl677638 Alouatta palliata APL 1 1012045 Alouatta palliata Tl677639 Eulemur rubriventer ERB 4 696007 Eulemur rubriventer Tl677640 Macaca nemestrina MNE 5 689656 Macaca nemestrina Tl677641 Oryctolagus cuniculus 864596 Oryctolagus cuniculus Tl677642 Macaca fascicularis MFA 18 689668 Macaca fascicularis Tl677643 Gorilla gorilla GGO 9 417965 Gorilla gorilla Tl677644 Chlorocebus aethiops CAE 8 268337 Chlorocebus aethiops Tl677645 Pygathrix nigripes PNI 1 473243 Pygathrix nigripes Tl677646 Presbytis comata PCM 1 68893 Presbytis comata Tl677647 Aotus azarae AZA 1 1058659 Aotus azarai Tl677648 Homo sapiens HSA 34 770315 Homo sapiens Tl677649 Aotus trivirgatus ATR 1 791711 Aotus trivirgatus Tl677650 Callicebus cupreus CCU 2 34118 Callicebus cupreus Tl677651 Mandrillus leucophaeus MLE 2 741057 Mandrillus leucophaeus Tl677652 Callithrix penicillata CPE 10 341908 Callithrix penicillata Tl677653 Cebus albifrons CEA 1 197032 Cebus albifrons Tl677654 Cercopithecus petaurista petaurista CPP 1 526951 Cercopithecus petaurista petaurista Tl677655 Macaca siberu MSE 1 311720 Macaca siberu Tl677656 Saimiri sciureus SSC 7 842875 Saimiri sciureus Tl677657 Eulemur sanfordi EFL 16 3607538 Eulemur sanfordi Tl677658 Cynocephalus volans CVO 1 781510 Cynocephalus volans Tl677659 Saguinus martinsi SSI 1 156862 Saguinus martinsi Tl677660 Chiropotes israelita CIS 1 571889 Chiropotes israelita Tl677661 Ateles paniscus APC 1 217258 Ateles paniscus Tl677662 Macaca fuscata MFS 2 689660 Macaca fuscata Tl677663 Lepilemur septentrionalis LSP 1 231273 Lepilemur septentrionalis Tl677664 Avahi laniger ALN 1 516002 Avahi laniger Tl677665 Cebus olivaceus COV 1 913293 Cebus olivaceus Tl677666 Aotus nancymaae ANA 1 913299 Aotus nancymaae Tl677667 Eulemur coronatus ECR 2 394965 Eulemur coronatus Tl677668 Macaca mulatta MMA 14 689650 Macaca mulatta Tl677669 Cercocebus chrysogaster CCY 1 554545 Cercocebus chrysogaster Tl677670 Chiropotes satanas chiropotes CSA 2 101531 Chiropotes chiropotes Tl677671 Nycticebus bengalensis NBE 1 1049687 Nycticebus bengalensis Tl677672 Eulemur albifrons EFL 7 259258 Eulemur albifrons Tl677673 Saimiri boliviensis boliviensis SBO 3 326801 Saimiri boliviensis boliviensis Tl677674 Miopithecus ogouensis MOG 1 949834 Miopithecus ogouensis Tl677675 Trachypithecus phayrei TPH 1 703784 Trachypithecus phayrei Tl677676 Saguinus midas SMD 1 532397 Saguinus midas Tl677677 Callimico goeldii CGO 1 489230 Callimico goeldii Tl677678 Chlorocebus sabaeus CSB 1 571316 Chlorocebus sabaeus Tl677679 Colobus angolensis palliatus CAN 1 713997 Colobus angolensis palliatus Tl677680 Microcebus murinus subspecies1 CMI 3 311211 Microcebus murinus Tl677681 Cercopithecus ascanius schmidti CAS 1 5513 Cercopithecus ascanius schmidti Tl677682 Cercopithecus mona CMO 2 918231 Cercopithecus mona Tl677683 Trachypithecus auratus TAU 1 240209 Trachypithecus auratus Tl677684 Nomascus concolor NCN 2 180370 Nomascus concolor Tl677685 Cercocebus torquatus CTR 1 268353 Cercocebus torquatus Tl677686 Cacajao melanocephalus CAM 1 1022358 Cacajao melanocephalus Tl677687 Pygathrix nemaeus PNE 2 721486 Pygathrix nemaeus Tl677688 Cebus robustus CRO 1 886281 Cebus nigritus robustus Tl677689 Aotus azarae boliviensis AZB 1 56003 Aotus azarai boliviensis Tl677690 Papio papio PPP 2 513904 Papio papio Tl677691 Rhinopithecus brelichi RBR 1 1068677 Rhinopithecus brelichi Tl677692 Nycticebus pygmaeus NPY 1 101793 Nycticebus pygmaeus Tl677693 Saimiri ustus SAU 1 455668 Saimiri ustus Tl677694 Macaca silenus MSI 7 111864 Macaca silenus Tl677695 Cercocebus agilis CAC 1 363077 Cercocebus agilis Tl677696 Ateles geoffroyi AGO 2 791691 Ateles geoffroyi Tl677697 Galeopterus variegatus CVA 5 617014 Galeopterus variegatus Tl677698 Lagothrix lagotricha LLG 1 297528 Lagothrix lagotricha Tl677699 Macaca cyclopis MCY 3 1067495 Macaca cyclopis Tl677700 Cebuella pygmaea CPY 5 489225 Callithrix pygmaea Tl677701 Colobus guereza CGU 7 565569 Colobus guereza Tl677702 Callicebus brunneus CBS 1 645175 Callicebus brunneus Tl677703 Semnopithecus entellus SEF 2 276589 Semnopithecus entellus Tl677704 Loris tardigradus LTA 2 152022 Loris tardigradus Tl677705 Saguinus geoffroyi SGE 3 235534 Saguinus geoffroyi Tl677706 Galago moholi GMO 4 311214 Galago moholi Tl677707 Ateles hybridus AHY 1 645692 Ateles hybridus Tl677708 Presbytis melalophos PME 2 406006 Presbytis melalophos Tl677709 ot:substitutionCount Myr Maximum likelihood node653018 node653015 false true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true false true true true true true true true true true true true true true true true true true true true true true true true true true 0 0 653395 0 653395 264664 1600 3231 1600