--embed --agent-only pythonVersion 2.7.5+ pythonImplementation CPython ^ot:ottId otu307715 otu307904 otu307718 otu307885 otu307727 otu307908 otu307728 otu307901 otu307734 otu307738 otu307754 otu307894 otu307760 otu307912 otu307774 otu307882 otu307776 otu307886 otu307783 otu307889 otu307795 otu307892 otu307796 otu307898 otu307824 otu307890 otu307834 otu307893 otu307876 otu307907 otu307880 otu307915 otu307887 otu307888 otu307905 otu307911 tree4212 bryan drew 23373 Orobanchaceae pg_2044 McNeal, J. R., Bennett, J. R., Wolfe, A. D., & Mathews, S. (2013). Phylogeny and origins of holoparasitism in Orobanchaceae. American journal of botany, 100(5), 971-983. 2013 Cordylanthus ramosus 86249 Cordylanthus ramosus Tl1049712 Bellardia trixago 76694 Bellardia trixago Tl1049713 Triphysaria floribunda 679308 Triphysaria floribunda Tl1049714 Castilleja exserta 131886 Castilleja exserta Tl1049715 Orobanche cernua 1041561 Orobanche cernua Tl1049716 Alectra sessiliflora 651149 Alectra sessiliflora Tl1049717 Escobedia grandiflora 1 706386 Escobedia grandiflora Tl1049718 Lindenbergia indica 404934 Lindenbergia indica Tl1049719 Euphrasia collina 86239 Euphrasia collina Tl1049720 Odontites himalayicus 404940 Odontites himalayicus Tl1049721 Seymeria pectinata 97345 Seymeria pectinata Tl1049722 Aeginetia indica 714982 Aeginetia indica Tl1049723 Siphonostegia chinensis 981056 Siphonostegia chinensis Tl1049724 Harveya bolusii 949873 Harveya bolusii Tl1049725 Rhinanthus glacialis 389296 Rhinanthus glacialis Tl1049726 Lamourouxia rhinanthifolia 404930 Lamourouxia rhinanthifolia Tl1049727 Orthocarpus bracteosus 643864 Orthocarpus bracteosus Tl1049728 Pedicularis julica 389282 Pedicularis julica Tl1049729 Cycnium racemosum 658281 Cycnium racemosum Tl1049730 Seymeria laciniata 389294 Seymeria laciniata Tl1049731 Pedicularis ingens 869593 Pedicularis ingens Tl1049732 Orobanche ludoviciana 722918 Orobanche ludoviciana Tl1049733 Striga orobanchoides 812102 Striga gesnerioides Tl1049734 Pedicularis tuberosa 721192 Pedicularis tuberosa Tl1049735 Euphrasia alsa 930679 Euphrasia alsa Tl1049736 Mannagettaea hummelii B 5144556 Mannagettaea hummelii Tl1049737 Striga gesnerioides 812102 Striga gesnerioides Tl1049738 Triphysaria pusilla 701050 Triphysaria pusilla Tl1049739 Boschniakia himalaica 1097761 Boschniakia himalaica Tl1049740 Striga linearifolia 1 455135 Striga bilabiata subsp. linearifolia Tl1049741 Striga asiatica 648846 Striga asiatica Tl1049742 Pterygiella nigrescens 904561 Pterygiella nigrescens Tl1049743 Macranthera flammea 643859 Macranthera flammea Tl1049744 Monochasma sheareri 706393 Monochasma sheareri Tl1049745 Orthocarpus tenuifolius 981068 Orthocarpus tenuifolius Tl1049746 Escobedia crassipes 5144566 Escobedia crassipes Tl1049747 Cistanche tubulosa 368050 Cistanche tubulosa Tl1049748 Boschniakia strobilacea 3882479 Boschniakia strobilacea Tl1049749 Solanum tuberosum 494835 Solanum tuberosum Tl1049750 Melampyrum arvense 404923 Melampyrum arvense Tl1049751 Lindenbergia muraria 404936 Lindenbergia muraria Tl1049752 Brandisia hancei 562074 Brandisia hancei Tl1049753 Aureolaria pedicularia 1099133 Aureolaria pedicularia Tl1049754 Graderia fruticosa 5144565 Graderia fruticosa Tl1049755 Striga bilabiata 25295 Striga bilabiata Tl1049756 Melampyrum carstiense 404925 Melampyrum carstiense Tl1049757 Nesogenes africanus 131870 Nesogenes africanus Tl1049758 Radamaea montana 383592 Radamaea montana Tl1049759 Castilleja coccinea 131882 Castilleja coccinea Tl1049760 Orobanche raddeana 23493 Orobanche raddeana Tl1049761 Striga elegans 25297 Striga elegans Tl1049762 Agalinis tenuifolia 1099129 Agalinis tenuifolia Tl1049763 Rhinanthus minor 146124 Rhinanthus minor Tl1049764 Lindenbergia philippensis 51396 Lindenbergia philippensis Tl1049765 Orobanche pinorum 23489 Orobanche pinorum Tl1049766 Orobanche ramosa 710207 Orobanche ramosa Tl1049767 Siphonostegia syriaca 5144548 Siphonostegia syriaca Tl1049768 Alonsoa sp. 895308 Alonsoa sp. Wood 18362 Tl1049769 Nesogenes dupontii 404938 Nesogenes dupontii Tl1049770 Euphrasia regelii 930688 Euphrasia regelii Tl1049771 Pedicularis gyrorhyncha 982498 Pedicularis gyrorhyncha Tl1049772 Castilleja densiflora 83189 Castilleja densiflora Tl1049773 Melasma scabrum 1 705543 Melasma scabrum Tl1049774 Lamourouxia dasyantha 5144559 Lamourouxia dasyantha Tl1049775 Lathraea clandestina 1 178174 Lathraea clandestina Tl1049776 Tozzia alpina 83779 Tozzia alpina Tl1049777 Pedicularis kansuensis 388725 Pedicularis kansuensis Tl1049778 Castilleja tenuis 86251 Castilleja tenuis Tl1049779 Orobanche corymbosa 710202 Orobanche corymbosa Tl1049780 Harveya speciosa 722924 Harveya speciosa Tl1049781 Rhinanthus freynii 389288 Rhinanthus alectorolophus subsp. freynii Tl1049782 Hyobanche sanguinea 658278 Hyobanche sanguinea Tl1049783 Pedicularis elwesii 95136 Pedicularis elwesii Tl1049784 Boschniakia rossica 722922 Boschniakia rossica Tl1049785 Cymbaria mongolica 706397 Cymbaria mongolica Tl1049786 Epifagus virginiana 648839 Epifagus virginiana Tl1049787 Antirrhinum majus 596457 Antirrhinum majus Tl1049788 Pedicularis densispica 456524 Pedicularis densispica Tl1049789 Buchnera americana 3882462 Buchnera americana Tl1049790 Buchnera glabrata 1097759 Buchnera glabrata Tl1049791 Rhynchocorys orientalis 76704 Rhynchocorys orientalis Tl1049792 Xylocalyx carterae 1 383596 Xylocalyx carterae Tl1049793 Cistanche phelypaea 675210 Cistanche phelypaea Tl1049794 Castilleja rubicundula 86233 Castilleja rubicundula Tl1049795 Agalinis purpurea 131876 Agalinis purpurea Tl1049796 Pedicularis kerneri 95131 Pedicularis kerneri Tl1049797 Hedbergia abyssinica 230015 Hedbergia abyssinica Tl1049798 Sopubia cana 651117 Sopubia cana Tl1049799 Cycnium adonense 1097768 Cycnium adonense Tl1049800 Castilleja lasiorhyncha 930674 Castilleja lasiorhyncha Tl1049801 Sopubia ramosa 540394 Sopubia ramosa Tl1049802 Scrophularia arguta 912491 Scrophularia arguta Tl1049803 Melampyrum pratense 503405 Melampyrum pratense Tl1049804 Melampyrum nemorosum 404928 Melampyrum nemorosum Tl1049805 Centranthera cochinchinensis 5144552 Centranthera cochinchinensis Tl1049806 Xylocalyx asper 1 455151 Xylocalyx asper Tl1049807 Hyobanche rubra 157062 Hyobanche rubra Tl1049808 Esterhazya campestris 706389 Esterhazya campestris Tl1049809 Sopubia lanata 455141 Sopubia lanata Tl1049810 Siphonostegia laeta 5144549 Siphonostegia laeta Tl1049811 Orobanche fasciculata 875520 Orobanche fasciculata Tl1049812 Conopholis alpina 598150 Conopholis alpina Tl1049813 Harveya leucopharynx 373589 Harveya leucopharynx Tl1049814 Hyobanche atropurpurea 875513 Hyobanche atropurpurea Tl1049815 Boschniakia hookeri 3882489 Boschniakia hookeri Tl1049816 Cycnium tubulosum 826605 Cycnium tubulosum Tl1049817 Harveya purpurea 83787 Harveya purpurea Tl1049818 Schwalbea americana 373773 Schwalbea americana Tl1049819 Chelone obliqua 710204 Chelone obliqua Tl1049820 Harveya capensis 671550 Harveya capensis Tl1049821 Rhinanthus alectorolophus 5144544 Rhinanthus alectorolophus Tl1049822 Bartsia alpina 83791 Bartsia alpina Tl1049823 Lathraea squamaria 1 404932 Lathraea squamaria Tl1049824 Orobanche californica 496133 Orobanche californica Tl1049825 Parentucellia latifolia 981066 Bellardia latifolia Tl1049826 Melampyrum sylvaticum 373775 Melampyrum sylvaticum Tl1049827 Euphrasia randii 523098 Euphrasia randii Tl1049828 Bungea trifida 131884 Bungea trifida Tl1049829 Parentucellia viscosa 83798 Bellardia viscosa Tl1049830 Lindenbergia sokotrana 404921 Lindenbergia sokotrana Tl1049831 Paulownia tomentosa 305916 Paulownia tomentosa Tl1049832 Hyobanche glabrata 157064 Hyobanche glabrata Tl1049833 Phtheirospermum japonicum 981070 Phtheirospermum japonicum Tl1049834 Bartsia crenata 131880 Bartsia crenata Tl1049835 Orobanche gracilis 444214 Orobanche gracilis Tl1049836 Conopholis americana 648868 Conopholis americana Tl1049837 Orobanche densiflora Sarah 74949 Orobanche densiflora Tl1049838 Christisonia siamensis 775278 Christisonia siamensis Tl1049839 Xylocalyx aculeolatus 5144564 Xylocalyx aculeolatus Tl1049840 Agalinis fasciculata 471388 Agalinis fasciculata Tl1049841 Pedicularis lanceolata 989662 Pedicularis lanceolata Tl1049842 Xylocalyx carterae 383596 Xylocalyx carterae Tl1049843 Xylocalyx asper 455151 Xylocalyx asper Tl1049844 Triphysaria floribunda 1387 4 679308 Triphysaria floribunda Tl1049845 Striga linearifolia 455135 Striga bilabiata subsp. linearifolia Tl1049846 Lathraea clandestina 178174 Lathraea clandestina Tl1049847 Escobedia laevis 5144567 Escobedia laevis Tl1049848 Escobedia grandiflora 706386 Escobedia grandiflora Tl1049849 Macranthera flava 643859 Macranthera flammea Tl1049850 Graderia fruticosa 1266 7 5144565 Graderia fruticosa Tl1049851 Castilleja densiflora 1429 14 83189 Castilleja densiflora Tl1049852 Lindenbergia grandiflora 1737 10 1 5144554 Lindenbergia grandiflora Tl1049853 Pedicularis foliosa 317428 Pedicularis foliosa Tl1049854 Orobanche minor 1091762 Orobanche minor Tl1049855 Pedicularis reticulata 1585 01 02 Tl1049856 Cycnium volkensii 1215 8 826607 Cycnium volkensii Tl1049857 Harveya bolusii 1429 9 949873 Harveya bolusii Tl1049858 Melampyrum velebiticum 742484 Melampyrum velebiticum Tl1049859 Mannagettaea sp. 5144555 Mannagettaea Tl1049860 Orobanche densiflora 74949 Orobanche densiflora Tl1049861 Castilleja linariifolia 237561 Castilleja linariifolia Tl1049862 Pedicularis contorta 1097777 Pedicularis contorta Tl1049863 Xylocalyx aculeolatus 1594 10 01 5144564 Xylocalyx aculeolatus Tl1049864 Castilleja fissifolia 930676 Castilleja fissifolia Tl1049865 Orobanche hederae 404883 Orobanche hederae Tl1049866 Siphonostegia syriaca 1737 5 1 5144548 Siphonostegia syriaca Tl1049867 Pedicularis canadensis 1586 09 01 3882309 Pedicularis canadensis Tl1049868 Pedicularis sudetica 1085692 Pedicularis sudetica Tl1049869 Lathraea squamaria 404932 Lathraea squamaria Tl1049870 Triphysaria pusilla 1689 4 1 701050 Triphysaria pusilla Tl1049871 Castilleja sp. 317400 Castilleja Tl1049872 Castilleja sessiliflora 567308 Castilleja sessiliflora Tl1049873 Bartsia mutica 1215 1 4724555 Bellardia mutica Tl1049874 Cistanche tubulosa 1594 8 2 368050 Cistanche tubulosa Tl1049875 Castilleja crista-galli 131889 Castilleja crista-galli Tl1049876 Melasma scabrum 705543 Melasma scabrum Tl1049877 Boschniakia himalaica B 1097761 Boschniakia himalaica Tl1049878 Centranthera cochinchinensis 1280 6 5144552 Centranthera cochinchinensis Tl1049879 Castilleja miniata 722928 Castilleja miniata Tl1049880 Ophiocephalus angustifolius 1387 5 679302 Castilleja ophiocephala Tl1049881 Melasma scabrum 2 705543 Melasma scabrum Tl1049882 Castilleja sp.1 317400 Castilleja Tl1049883 Euphrasia stricta 930686 Euphrasia stricta Tl1049884 Escobedia grandiflora 2 706386 Escobedia grandiflora Tl1049885 Lathraea clandestina 2 178174 Lathraea clandestina Tl1049886 Castilleja sulphurea 2 701052 Castilleja sulphurea Tl1049887 Castilleja sulphurea 1 701052 Castilleja sulphurea Tl1049888 Hyobanche sanguinea Sarah 658278 Hyobanche sanguinea Tl1049889 Lathraea squamaria 2 404932 Lathraea squamaria Tl1049890 Harveya pulchra 474310 Harveya pulchra Tl1049891 Castilleja rubicundula Bii 86233 Castilleja rubicundula Tl1049892 Phtheirospermum japonicum Bii 981070 Phtheirospermum japonicum Tl1049893 Aureolaria pedicularia Bii 1099133 Aureolaria pedicularia Tl1049894 Euphrasia pectinata 140737 Euphrasia pectinata Tl1049895 Orobanche pinorum 1130 8 6 23489 Orobanche pinorum Tl1049896 Castilleja tenuis Bii 86251 Castilleja tenuis Tl1049897 Agalinis purpurea Bii 131876 Agalinis purpurea Tl1049898 Pedicularis confertiflora Bii 456518 Pedicularis confertiflora Tl1049899 Euphrasia salisburgensis 1049292 Euphrasia salisburgensis Tl1049900 Orthocarpus bracteosus Bii 643864 Orthocarpus bracteosus Tl1049901 Triphysaria pusilla Bii 701050 Triphysaria pusilla Tl1049902 Striga bilabiata JnJconsensus 25295 Striga bilabiata Tl1049903 Castilleja exserta Bii 131886 Castilleja exserta Tl1049904 Castilleja sulphurea 701052 Castilleja sulphurea Tl1049905 Castilleja sessiliflora Bii 567308 Castilleja sessiliflora Tl1049906 Castilleja crista-galli Bii 131889 Castilleja crista-galli Tl1049907 Lamourouxia rhinanthifolia Bii 404930 Lamourouxia rhinanthifolia Tl1049908 Seymeria laciniata Bii 389294 Seymeria laciniata Tl1049909 Seymeria pectinata Bii 97345 Seymeria pectinata Tl1049910 Castilleja sulphurea Bii 701052 Castilleja sulphurea Tl1049911 Castilleja coccinea Bii 131882 Castilleja coccinea Tl1049912 Castilleja lasiorhyncha Bii 930674 Castilleja lasiorhyncha Tl1049913 Pedicularis anthemifolia Bii 5144562 Pedicularis anthemifolia Tl1049914 Castilleja miniata Bii 722928 Castilleja miniata Tl1049915 Pedicularis canadensis Bii 3882309 Pedicularis canadensis Tl1049916 Pedicularis cranolopha Bii 562107 Pedicularis cranolopha Tl1049917 Mannagettaea hummelii 5144556 Mannagettaea hummelii Tl1049918 ot:substitutionCount phyB 111 taxa node780286 true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true ot:substitutionCount plastid 119 taxa node780509 true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true ot:substitutionCount ITS node780738 true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true ot:substitutionCount all genes node781029 true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true ot:substitutionCount phyA 112 taxa node781284 node781276 false true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true