{"sha": "c33806c9ee11db205ee8c02a42e31b1c3128e299", "data": {"nexml": {"@generator": "Phylografter nexml-json exporter", "@id": "study", "@nexml2json": "0.0.0", "@nexmljson": "http://purl.org/opentree/nexson", "@version": "0.9", "@xmlns": {"$": "http://www.nexml.org/2009", "nex": "http://www.nexml.org/2009", "ot": "http://purl.org/opentree-terms#", "xsd": "http://www.w3.org/2001/XMLSchema#", "xsi": "http://www.w3.org/2001/XMLSchema-instance"}, "otus": {"@id": "otus2061", "otu": [{"@id": "otu310066", "@about": "#otu310066", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Prismatolaimus sp NE"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 455831}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Prismatolaimus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl15802"}]}, {"@id": "otu310067", "@about": "#otu310067", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Akrotonus vigor"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 427743}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Akrotonus vigor"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl15803"}]}, {"@id": "otu310068", "@about": "#otu310068", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Belondira apitica"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 3590033}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Belondira apitica"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl15804"}]}, {"@id": "otu310069", "@about": "#otu310069", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Metachromadora sp GB"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 299648}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Metachromadora"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl15806"}]}, {"@id": "otu310070", "@about": "#otu310070", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Paractinolaimus sp NE"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 852790}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Paractinolaimus sp. PM-2002"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl15807"}]}, {"@id": "otu310071", "@about": "#otu310071", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Mylonchulus subsimilis"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 3590151}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Mylonchulus subsimilis"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl15809"}]}, {"@id": "otu310072", "@about": "#otu310072", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Alaimus parvus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 1019333}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Alaimus parvus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl15811"}]}, {"@id": "otu310073", "@about": "#otu310073", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Tripyla affinis"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 3590607}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Tripyla affinis"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl15812"}]}, {"@id": "otu310074", "@about": "#otu310074", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Leptonchus microdens"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 165175}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Leptonchus microdens"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl15813"}]}, {"@id": "otu310075", "@about": "#otu310075", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Romanomermis culicivorax"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 18708}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Romanomermis culicivorax"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl15815"}]}, {"@id": "otu310076", "@about": "#otu310076", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Isolaimium sp NE"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 598619}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Isolaimium sp. 2-PM-2004"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl15816"}]}, {"@id": "otu310077", "@about": "#otu310077", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Pontonema vulgare"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 10154}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Pontonema vulgare"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl15817"}]}, {"@id": "otu310078", "@about": "#otu310078", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Miconchus fasciatus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 244569}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Miconchus cf. fasciatus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl15818"}]}, {"@id": "otu310079", "@about": "#otu310079", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Trichodorus proximus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 319613}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Trichodorus cf. proximus Konza IAC-11"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl15819"}]}, {"@id": "otu310080", "@about": "#otu310080", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Ironus sp NE"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 598617}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Ironus sp. 2-PM-2004"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl15820"}]}, {"@id": "otu310081", "@about": "#otu310081", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Xiphinema vuittenezi"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 1018557}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Xiphinema vuittenezi"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl235733"}]}, {"@id": "otu310082", "@about": "#otu310082", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Campydora demonstrans"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 1019318}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Campydora demonstrans"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl235734"}]}, {"@id": "otu310083", "@about": "#otu310083", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Diphtherophora obesus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 729690}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Diphtherophora obesus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl235735"}]}, {"@id": "otu310084", "@about": "#otu310084", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Aquatides christei"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 963781}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Aquatides christei"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl235737"}]}, {"@id": "otu310085", "@about": "#otu310085", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Enoplus brevis"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 910208}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Enoplus brevis"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl235744"}]}, {"@id": "otu310086", "@about": "#otu310086", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Trichinella spiralis"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 567340}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Trichinella spiralis"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl235746"}]}], "@about": "#otus2061"}, "trees": {"@otus": "otus2061", "@id": "trees2061", "tree": [{"@label": "Fig. 1", "@xsi:type": "nex:FloatTree", "node": [{"@root": true, "@id": "node787876", "@about": "#node787876"}, {"@otu": "otu310078", "@id": "node787877", "@about": "#node787877", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node787878", "@about": "#node787878"}, {"@otu": "otu310071", "@id": "node787879", "@about": "#node787879", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node787880", "@about": "#node787880"}, {"@otu": "otu310075", "@id": "node787881", "@about": "#node787881", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node787882", "@about": "#node787882"}, {"@otu": "otu310086", "@id": "node787883", "@about": "#node787883", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node787884", "@about": "#node787884"}, {"@id": "node787885", "@about": "#node787885"}, {"@id": "node787886", "@about": "#node787886"}, {"@id": "node787887", "@about": "#node787887"}, {"@id": "node787888", "@about": "#node787888"}, {"@otu": "otu310067", "@id": "node787889", "@about": "#node787889", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node787890", "@about": "#node787890"}, {"@otu": "otu310068", "@id": "node787891", "@about": "#node787891", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310074", "@id": "node787892", "@about": "#node787892", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310081", "@id": "node787893", "@about": "#node787893", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310070", "@id": "node787894", "@about": "#node787894", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310084", "@id": "node787895", "@about": "#node787895", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node787896", "@about": "#node787896"}, {"@id": "node787897", "@about": "#node787897"}, {"@otu": "otu310076", "@id": "node787898", "@about": "#node787898", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310069", "@id": "node787899", "@about": "#node787899", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node787900", "@about": "#node787900"}, {"@id": "node787901", "@about": "#node787901"}, {"@id": "node787902", "@about": "#node787902"}, {"@otu": "otu310083", "@id": "node787903", "@about": "#node787903", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310079", "@id": "node787904", "@about": "#node787904", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310066", "@id": "node787905", "@about": "#node787905", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node787906", "@about": "#node787906"}, {"@id": "node787907", "@about": "#node787907"}, {"@otu": "otu310085", "@id": "node787908", "@about": "#node787908", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310080", "@id": "node787909", "@about": "#node787909", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node787910", "@about": "#node787910"}, {"@otu": "otu310073", "@id": "node787911", "@about": "#node787911", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node787912", "@about": "#node787912"}, {"@id": "node787913", "@about": "#node787913"}, {"@otu": "otu310082", "@id": "node787914", "@about": "#node787914", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310077", "@id": "node787915", "@about": "#node787915", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310072", "@id": "node787916", "@about": "#node787916", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}], "edge": [{"@source": "node787876", "@target": "node787877", "@id": "edge787877", "@about": "#edge787877"}, {"@source": "node787876", "@target": "node787878", "@id": "edge787878", "@about": "#edge787878"}, {"@source": "node787878", "@target": "node787879", "@id": "edge787879", "@about": "#edge787879"}, {"@source": "node787878", "@target": "node787880", "@id": "edge787880", "@about": "#edge787880"}, {"@source": "node787880", "@target": "node787881", "@id": "edge787881", "@about": "#edge787881"}, {"@source": "node787880", "@target": "node787882", "@id": "edge787882", "@about": "#edge787882"}, {"@source": "node787882", "@target": "node787883", "@id": "edge787883", "@about": "#edge787883"}, {"@source": "node787882", "@target": "node787884", "@id": "edge787884", "@about": "#edge787884"}, {"@source": "node787884", "@target": "node787885", "@id": "edge787885", "@about": "#edge787885"}, {"@source": "node787885", "@target": "node787886", "@id": "edge787886", "@about": "#edge787886"}, {"@source": "node787886", "@target": "node787887", "@id": "edge787887", "@about": "#edge787887"}, {"@source": "node787887", "@target": "node787888", "@id": "edge787888", "@about": "#edge787888"}, {"@source": "node787888", "@target": "node787889", "@id": "edge787889", "@about": "#edge787889"}, {"@source": "node787888", "@target": "node787890", "@id": "edge787890", "@about": "#edge787890"}, {"@source": "node787890", "@target": "node787891", "@id": "edge787891", "@about": "#edge787891"}, {"@source": "node787890", "@target": "node787892", "@id": "edge787892", "@about": "#edge787892"}, {"@source": "node787887", "@target": "node787893", "@id": "edge787893", "@about": "#edge787893"}, {"@source": "node787886", "@target": "node787894", "@id": "edge787894", "@about": "#edge787894"}, {"@source": "node787885", "@target": "node787895", "@id": "edge787895", "@about": "#edge787895"}, {"@source": "node787884", "@target": "node787896", "@id": "edge787896", "@about": "#edge787896"}, {"@source": "node787896", "@target": "node787897", "@id": "edge787897", "@about": "#edge787897"}, {"@source": "node787897", "@target": "node787898", "@id": "edge787898", "@about": "#edge787898"}, {"@source": "node787897", "@target": "node787899", "@id": "edge787899", "@about": "#edge787899"}, {"@source": "node787896", "@target": "node787900", "@id": "edge787900", "@about": "#edge787900"}, {"@source": "node787900", "@target": "node787901", "@id": "edge787901", "@about": "#edge787901"}, {"@source": "node787901", "@target": "node787902", "@id": "edge787902", "@about": "#edge787902"}, {"@source": "node787902", "@target": "node787903", "@id": "edge787903", "@about": "#edge787903"}, {"@source": "node787902", "@target": "node787904", "@id": "edge787904", "@about": "#edge787904"}, {"@source": "node787901", "@target": "node787905", "@id": "edge787905", "@about": "#edge787905"}, {"@source": "node787900", "@target": "node787906", "@id": "edge787906", "@about": "#edge787906"}, {"@source": "node787906", "@target": "node787907", "@id": "edge787907", "@about": "#edge787907"}, {"@source": "node787907", "@target": "node787908", "@id": "edge787908", "@about": "#edge787908"}, {"@source": "node787907", "@target": "node787909", "@id": "edge787909", "@about": "#edge787909"}, {"@source": "node787906", "@target": "node787910", "@id": "edge787910", "@about": "#edge787910"}, {"@source": "node787910", "@target": "node787911", "@id": "edge787911", "@about": "#edge787911"}, {"@source": "node787910", "@target": "node787912", "@id": "edge787912", "@about": "#edge787912"}, {"@source": "node787912", "@target": "node787913", "@id": "edge787913", "@about": "#edge787913"}, {"@source": "node787913", "@target": "node787914", "@id": "edge787914", "@about": "#edge787914"}, {"@source": "node787913", "@target": "node787915", "@id": "edge787915", "@about": "#edge787915"}, {"@source": "node787912", "@target": "node787916", "@id": "edge787916", "@about": "#edge787916"}], "@id": "tree4244", "@about": "#tree4244", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:branchLengthDescription", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:branchLengthTimeUnit", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:curatedType", "@datatype": "xsd:string", "$": "Maximum parsimony "}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:inGroupClade", "@datatype": "xsd:string", "$": "node787884"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:nearestTaxonMRCAName", "@datatype": "xsd:string", "$": "Nematoda"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:nearestTaxonMRCAOttId", "@datatype": "xsd:string", "$": "395057"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:outGroupEdge", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:specifiedRoot", "@datatype": "xsd:string", "$": "node787876"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:unrootedTree", "@datatype": "xsd:boolean", "$": false}]}, {"@label": "Fig. 2", "@xsi:type": "nex:FloatTree", "node": [{"@root": true, "@id": "node787917", "@about": "#node787917"}, {"@otu": "otu310078", "@id": "node787918", "@about": "#node787918", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node787919", "@about": "#node787919"}, {"@otu": "otu310071", "@id": "node787920", "@about": "#node787920", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node787921", "@about": "#node787921"}, {"@otu": "otu310075", "@id": "node787922", "@about": "#node787922", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node787923", "@about": "#node787923"}, {"@otu": "otu310086", "@id": "node787924", "@about": "#node787924", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node787925", "@about": "#node787925"}, {"@id": "node787926", "@about": "#node787926"}, {"@id": "node787927", "@about": "#node787927"}, {"@id": "node787928", "@about": "#node787928"}, {"@id": "node787929", "@about": "#node787929"}, {"@id": "node787930", "@about": "#node787930"}, {"@otu": "otu310067", "@id": "node787931", "@about": "#node787931", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node787932", "@about": "#node787932"}, {"@otu": "otu310081", "@id": "node787933", "@about": "#node787933", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310070", "@id": "node787934", "@about": "#node787934", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310068", "@id": "node787935", "@about": "#node787935", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310074", "@id": "node787936", "@about": "#node787936", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310084", "@id": "node787937", "@about": "#node787937", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310076", "@id": "node787938", "@about": "#node787938", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node787939", "@about": "#node787939"}, {"@otu": "otu310069", "@id": "node787940", "@about": "#node787940", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node787941", "@about": "#node787941"}, {"@id": "node787942", "@about": "#node787942"}, {"@id": "node787943", "@about": "#node787943"}, {"@otu": "otu310083", "@id": "node787944", "@about": "#node787944", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310079", "@id": "node787945", "@about": "#node787945", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310066", "@id": "node787946", "@about": "#node787946", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node787947", "@about": "#node787947"}, {"@id": "node787948", "@about": "#node787948"}, {"@id": "node787949", "@about": "#node787949"}, {"@id": "node787950", "@about": "#node787950"}, {"@id": "node787951", "@about": "#node787951"}, {"@otu": "otu310085", "@id": "node787952", "@about": "#node787952", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310073", "@id": "node787953", "@about": "#node787953", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310080", "@id": "node787954", "@about": "#node787954", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310077", "@id": "node787955", "@about": "#node787955", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310072", "@id": "node787956", "@about": "#node787956", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310082", "@id": "node787957", "@about": "#node787957", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}], "edge": [{"@source": "node787917", "@target": "node787918", "@id": "edge787918", "@about": "#edge787918"}, {"@source": "node787917", "@target": "node787919", "@id": "edge787919", "@about": "#edge787919"}, {"@source": "node787919", "@target": "node787920", "@id": "edge787920", "@about": "#edge787920"}, {"@source": "node787919", "@target": "node787921", "@id": "edge787921", "@about": "#edge787921"}, {"@source": "node787921", "@target": "node787922", "@id": "edge787922", "@about": "#edge787922"}, {"@source": "node787921", "@target": "node787923", "@id": "edge787923", "@about": "#edge787923"}, {"@source": "node787923", "@target": "node787924", "@id": "edge787924", "@about": "#edge787924"}, {"@source": "node787923", "@target": "node787925", "@id": "edge787925", "@about": "#edge787925"}, {"@source": "node787925", "@target": "node787926", "@id": "edge787926", "@about": "#edge787926"}, {"@source": "node787926", "@target": "node787927", "@id": "edge787927", "@about": "#edge787927"}, {"@source": "node787927", "@target": "node787928", "@id": "edge787928", "@about": "#edge787928"}, {"@source": "node787928", "@target": "node787929", "@id": "edge787929", "@about": "#edge787929"}, {"@source": "node787929", "@target": "node787930", "@id": "edge787930", "@about": "#edge787930"}, {"@source": "node787930", "@target": "node787931", "@id": "edge787931", "@about": "#edge787931"}, {"@source": "node787930", "@target": "node787932", "@id": "edge787932", "@about": "#edge787932"}, {"@source": "node787932", "@target": "node787933", "@id": "edge787933", "@about": "#edge787933"}, {"@source": "node787932", "@target": "node787934", "@id": "edge787934", "@about": "#edge787934"}, {"@source": "node787929", "@target": "node787935", "@id": "edge787935", "@about": "#edge787935"}, {"@source": "node787928", "@target": "node787936", "@id": "edge787936", "@about": "#edge787936"}, {"@source": "node787927", "@target": "node787937", "@id": "edge787937", "@about": "#edge787937"}, {"@source": "node787926", "@target": "node787938", "@id": "edge787938", "@about": "#edge787938"}, {"@source": "node787925", "@target": "node787939", "@id": "edge787939", "@about": "#edge787939"}, {"@source": "node787939", "@target": "node787940", "@id": "edge787940", "@about": "#edge787940"}, {"@source": "node787939", "@target": "node787941", "@id": "edge787941", "@about": "#edge787941"}, {"@source": "node787941", "@target": "node787942", "@id": "edge787942", "@about": "#edge787942"}, {"@source": "node787942", "@target": "node787943", "@id": "edge787943", "@about": "#edge787943"}, {"@source": "node787943", "@target": "node787944", "@id": "edge787944", "@about": "#edge787944"}, {"@source": "node787943", "@target": "node787945", "@id": "edge787945", "@about": "#edge787945"}, {"@source": "node787942", "@target": "node787946", "@id": "edge787946", "@about": "#edge787946"}, {"@source": "node787941", "@target": "node787947", "@id": "edge787947", "@about": "#edge787947"}, {"@source": "node787947", "@target": "node787948", "@id": "edge787948", "@about": "#edge787948"}, {"@source": "node787948", "@target": "node787949", "@id": "edge787949", "@about": "#edge787949"}, {"@source": "node787949", "@target": "node787950", "@id": "edge787950", "@about": "#edge787950"}, {"@source": "node787950", "@target": "node787951", "@id": "edge787951", "@about": "#edge787951"}, {"@source": "node787951", "@target": "node787952", "@id": "edge787952", "@about": "#edge787952"}, {"@source": "node787951", "@target": "node787953", "@id": "edge787953", "@about": "#edge787953"}, {"@source": "node787950", "@target": "node787954", "@id": "edge787954", "@about": "#edge787954"}, {"@source": "node787949", "@target": "node787955", "@id": "edge787955", "@about": "#edge787955"}, {"@source": "node787948", "@target": "node787956", "@id": "edge787956", "@about": "#edge787956"}, {"@source": "node787947", "@target": "node787957", "@id": "edge787957", "@about": "#edge787957"}], "@id": "tree4245", "@about": "#tree4245", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:branchLengthDescription", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:branchLengthTimeUnit", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:curatedType", "@datatype": "xsd:string", "$": "Maximum likelihood "}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:inGroupClade", "@datatype": "xsd:string", "$": "node787925"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:nearestTaxonMRCAName", "@datatype": "xsd:string", "$": "Nematoda"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:nearestTaxonMRCAOttId", "@datatype": "xsd:string", "$": "395057"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:outGroupEdge", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:specifiedRoot", "@datatype": "xsd:string", "$": "node787917"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:unrootedTree", "@datatype": "xsd:boolean", "$": false}]}, {"@label": "Fig. 3", "@xsi:type": "nex:FloatTree", "node": [{"@root": true, "@id": "node787958", "@about": "#node787958"}, {"@otu": "otu310078", "@id": "node787959", "@about": "#node787959", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node787960", "@about": "#node787960"}, {"@otu": "otu310071", "@id": "node787961", "@about": "#node787961", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node787962", "@about": "#node787962"}, {"@otu": "otu310075", "@id": "node787963", "@about": "#node787963", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node787964", "@about": "#node787964"}, {"@otu": "otu310086", "@id": "node787965", "@about": "#node787965", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node787966", "@about": "#node787966"}, {"@id": "node787967", "@about": "#node787967"}, {"@id": "node787968", "@about": "#node787968"}, {"@id": "node787969", "@about": "#node787969"}, {"@id": "node787970", "@about": "#node787970"}, {"@id": "node787971", "@about": "#node787971"}, {"@otu": "otu310067", "@id": "node787972", "@about": "#node787972", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310081", "@id": "node787973", "@about": "#node787973", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310070", "@id": "node787974", "@about": "#node787974", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310068", "@id": "node787975", "@about": "#node787975", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310074", "@id": "node787976", "@about": "#node787976", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310084", "@id": "node787977", "@about": "#node787977", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node787978", "@about": "#node787978"}, {"@id": "node787979", "@about": "#node787979"}, {"@otu": "otu310076", "@id": "node787980", "@about": "#node787980", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310069", "@id": "node787981", "@about": "#node787981", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node787982", "@about": "#node787982"}, {"@id": "node787983", "@about": "#node787983"}, {"@id": "node787984", "@about": "#node787984"}, {"@otu": "otu310083", "@id": "node787985", "@about": "#node787985", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310079", "@id": "node787986", "@about": "#node787986", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310066", "@id": "node787987", "@about": "#node787987", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node787988", "@about": "#node787988"}, {"@id": "node787989", "@about": "#node787989"}, {"@id": "node787990", "@about": "#node787990"}, {"@id": "node787991", "@about": "#node787991"}, {"@id": "node787992", "@about": "#node787992"}, {"@otu": "otu310085", "@id": "node787993", "@about": "#node787993", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310077", "@id": "node787994", "@about": "#node787994", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310073", "@id": "node787995", "@about": "#node787995", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310080", "@id": "node787996", "@about": "#node787996", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310072", "@id": "node787997", "@about": "#node787997", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu310082", "@id": "node787998", "@about": "#node787998", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}], "edge": [{"@source": "node787958", "@target": "node787959", "@id": "edge787959", "@about": "#edge787959"}, {"@source": "node787958", "@target": "node787960", "@id": "edge787960", "@about": "#edge787960"}, {"@source": "node787960", "@target": "node787961", "@id": "edge787961", "@about": "#edge787961"}, {"@source": "node787960", "@target": "node787962", "@id": "edge787962", "@about": "#edge787962"}, {"@source": "node787962", "@target": "node787963", "@id": "edge787963", "@about": "#edge787963"}, {"@source": "node787962", "@target": "node787964", "@id": "edge787964", "@about": "#edge787964"}, {"@source": "node787964", "@target": "node787965", "@id": "edge787965", "@about": "#edge787965"}, {"@source": "node787964", "@target": "node787966", "@id": "edge787966", "@about": "#edge787966"}, {"@source": "node787966", "@target": "node787967", "@id": "edge787967", "@about": "#edge787967"}, {"@source": "node787967", "@target": "node787968", "@id": "edge787968", "@about": "#edge787968"}, {"@source": "node787968", "@target": "node787969", "@id": "edge787969", "@about": "#edge787969"}, {"@source": "node787969", "@target": "node787970", "@id": "edge787970", "@about": "#edge787970"}, {"@source": "node787970", "@target": "node787971", "@id": "edge787971", "@about": "#edge787971"}, {"@source": "node787971", "@target": "node787972", "@id": "edge787972", "@about": "#edge787972"}, {"@source": "node787971", "@target": "node787973", "@id": "edge787973", "@about": "#edge787973"}, {"@source": "node787970", "@target": "node787974", "@id": "edge787974", "@about": "#edge787974"}, {"@source": "node787969", "@target": "node787975", "@id": "edge787975", "@about": "#edge787975"}, {"@source": "node787968", "@target": "node787976", "@id": "edge787976", "@about": "#edge787976"}, {"@source": "node787967", "@target": "node787977", "@id": "edge787977", "@about": "#edge787977"}, {"@source": "node787966", "@target": "node787978", "@id": "edge787978", "@about": "#edge787978"}, {"@source": "node787978", "@target": "node787979", "@id": "edge787979", "@about": "#edge787979"}, {"@source": "node787979", "@target": "node787980", "@id": "edge787980", "@about": "#edge787980"}, {"@source": "node787979", "@target": "node787981", "@id": "edge787981", "@about": "#edge787981"}, {"@source": "node787978", "@target": "node787982", "@id": "edge787982", "@about": "#edge787982"}, {"@source": "node787982", "@target": "node787983", "@id": "edge787983", "@about": "#edge787983"}, {"@source": "node787983", "@target": "node787984", "@id": "edge787984", "@about": "#edge787984"}, {"@source": "node787984", "@target": "node787985", "@id": "edge787985", "@about": "#edge787985"}, {"@source": "node787984", "@target": "node787986", "@id": "edge787986", "@about": "#edge787986"}, {"@source": "node787983", "@target": "node787987", "@id": "edge787987", "@about": "#edge787987"}, {"@source": "node787982", "@target": "node787988", "@id": "edge787988", "@about": "#edge787988"}, {"@source": "node787988", "@target": "node787989", "@id": "edge787989", "@about": "#edge787989"}, {"@source": "node787989", "@target": "node787990", "@id": "edge787990", "@about": "#edge787990"}, {"@source": "node787990", "@target": "node787991", "@id": "edge787991", "@about": "#edge787991"}, {"@source": "node787991", "@target": "node787992", "@id": "edge787992", "@about": "#edge787992"}, {"@source": "node787992", "@target": "node787993", "@id": "edge787993", "@about": "#edge787993"}, {"@source": "node787992", "@target": "node787994", "@id": "edge787994", "@about": "#edge787994"}, {"@source": "node787991", "@target": "node787995", "@id": "edge787995", "@about": "#edge787995"}, {"@source": "node787990", "@target": "node787996", "@id": "edge787996", "@about": "#edge787996"}, {"@source": "node787989", "@target": "node787997", "@id": "edge787997", "@about": "#edge787997"}, {"@source": "node787988", "@target": "node787998", "@id": "edge787998", "@about": "#edge787998"}], "@id": "tree4246", "@about": "#tree4246", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:branchLengthDescription", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:branchLengthTimeUnit", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:curatedType", "@datatype": "xsd:string", "$": "Neighbor-joining "}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:inGroupClade", "@datatype": "xsd:string", "$": "node787966"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:nearestTaxonMRCAName", "@datatype": "xsd:string", "$": "Nematoda"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:nearestTaxonMRCAOttId", "@datatype": "xsd:string", "$": "395057"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:outGroupEdge", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:specifiedRoot", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:tag", "@datatype": "xsd:string", "$": "choose me"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:unrootedTree", "@datatype": "xsd:boolean", "$": true}]}], "@about": "#trees2061"}, "@about": "#study", "meta": [{"agent": [{"@description": "validator of NexSON constraints as well as constraints that would allow a study to be imported into the Open Tree of Life's phylogenetic synthesis tools", "@id": "peyotl-validator", "@name": "validate_ot_nexson.py", "@url": "https://github.com/OpenTreeOfLife/peyotl", "@version": "0.0.4a", "invocation": {"commandLine": ["--embed", "--agent-only"], "otherProperty": [{"name": "pythonVersion", "value": "2.7.5+"}, {"name": "pythonImplementation", "value": "CPython"}]}, "@about": "#peyotl-validator"}, {"@description": "Web-based interface for submitting, editing, and reviewing studies in the Open Tree of Life project.", "@id": "opentree-curation-webapp", "@name": "OpenTree curation webapp", "@url": "https://github.com/OpenTreeOfLife/opentree", "@version": "0.0.0", "@about": "#opentree-curation-webapp"}], "@xsi:type": "nex:LiteralMeta", "@property": "ot:agents"}, {"annotation": [{"@dateCreated": "2014-08-15T18:20:36.102Z", "@description": "Aids for mapping study OTUs to OTT taxa", "@id": "otu-mapping-hints", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "OTU_MAPPING_HINTS", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"searchContext": {"$": "All life"}, "substitutions": {"substitution": [{"@active": false, "@valid": true, "new": {"$": ""}, "old": {"$": ""}}]}}, "refersTo": {"@top": {"$": "meta"}}}], "@about": "#otu-mapping-hints"}, {"@dateCreated": "2014-08-15T18:20:36.102Z", "@description": "Describes supporting data files for this study", "@id": "supporting-files-metadata", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "SUPPORTING_FILE_INFO", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"@movedToPermanentArchive": false, "files": {"file": []}}, "refersTo": {"@top": {"$": "meta"}}}], "@about": "#supporting-files-metadata"}, {"@id": "peyotl-validator-event", "@description": "Open Tree NexSON validation", "@wasAssociatedWithAgentId": "peyotl-validator", "@passedChecks": true, "@preserve": false, "message": [{"@code": "UNRECOGNIZED_KEY", "data": ["^ot:comment"], "refersTo": {"@top": "nexml", "@idref": "study"}, "@severity": "WARNING"}, {"@code": "MISSING_OPTIONAL_KEY", "data": ["^ot:branchLengthMode"], "refersTo": {"@top": "trees", "@idref": "tree4244", "@treesID": "trees2061", "@treeID": "tree4244"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:nearestTaxonMRCAName", "^ot:nearestTaxonMRCAOttId"], "refersTo": {"@top": "trees", "@idref": "tree4244", "@treesID": "trees2061", "@treeID": "tree4244"}, "@severity": "WARNING"}, {"@code": "MISSING_OPTIONAL_KEY", "data": ["^ot:branchLengthMode"], "refersTo": {"@top": "trees", "@idref": "tree4245", "@treesID": "trees2061", "@treeID": "tree4245"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:nearestTaxonMRCAName", "^ot:nearestTaxonMRCAOttId"], "refersTo": {"@top": "trees", "@idref": "tree4245", "@treesID": "trees2061", "@treeID": "tree4245"}, "@severity": "WARNING"}, {"@code": "MISSING_OPTIONAL_KEY", "data": ["^ot:branchLengthMode"], "refersTo": {"@top": "trees", "@idref": "tree4246", "@treesID": "trees2061", "@treeID": "tree4246"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:nearestTaxonMRCAName", "^ot:nearestTaxonMRCAOttId"], "refersTo": {"@top": "trees", "@idref": "tree4246", "@treesID": "trees2061", "@treeID": "tree4246"}, "@severity": "WARNING"}], "@about": "#peyotl-validator-event"}], "@xsi:type": "nex:LiteralMeta", "@property": "ot:annotationEvents"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:candidateTreeForSynthesis", "@datatype": "xsd:string", "$": "tree4245"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:comment", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:curatorName", "@datatype": "xsd:string", "$": "Chris Owen"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:curatorName", "@datatype": "xsd:string", "$": "Joseph W. Brown"}, {"@href": "http://purl.org/phylo/treebase/phylows/study/TB2:S1022", "@xsi:type": "nex:ResourceMeta", "@rel": "ot:dataDeposit"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:focalClade", "@datatype": "xsd:int", "$": 338374}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:focalCladeOTTTaxonName", "@datatype": "xsd:string", "$": "Campydora"}, {"message": [], "@xsi:type": "nex:LiteralMeta", "@property": "ot:messages"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:notIntendedForSynthesis", "@datatype": "xsd:boolean", "$": false}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:studyId", "@datatype": "xsd:string", "$": "pg_2061"}, {"@href": "http://dx.doi.org/10.1163/156854103322746878", "@xsi:type": "nex:ResourceMeta", "@rel": "ot:studyPublication"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:studyPublicationReference", "@datatype": "xsd:string", "$": "Mullin P., Harris T., & Powers T. 2003. Systematic status of Campydora Cobb, 1920 (Nematoda: Campydorina). Nematology 5 (5): 699-711."}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:studyYear", "@datatype": "xsd:int", "$": 2003}]}}, "branch2sha": {"master": "c33806c9ee11db205ee8c02a42e31b1c3128e299"}, "commentHTML": "", "duplicateStudyIDs": [], "shardName": "phylesystem-1", "versionHistory": [{"id": "20fe576221ea5e831089edbe4d699066b6e0bb2f", "author_name": "Joseph W. Brown", "author_email": "ANONYMOUS", "date": "Fri, 15 Aug 2014 18:33:13 +0000", "date_ISO_8601": "2014-08-15 18:33:13 +0000", "relative_date": "12 years ago", "message_subject": "preferred tree", "message_body": "(Update Study #pg_2061 via OpenTree API)"}, {"id": "bccb00c96829739cfc23f0edd481c86151ca3900", "author_name": "Joseph W. Brown", "author_email": "ANONYMOUS", "date": "Fri, 15 Aug 2014 18:32:05 +0000", "date_ISO_8601": "2014-08-15 18:32:05 +0000", "relative_date": "12 years ago", "message_subject": "tree names / methods", "message_body": "(Update Study #pg_2061 via OpenTree API)"}, {"id": "d33fb39501605772a074dffc82affa5344ea9a94", "author_name": "Mark T. Holder", "author_email": "mtholder@gmail.com", "date": "Wed, 11 Jun 2014 22:18:34 -0500", "date_ISO_8601": "2014-06-11 22:18:34 -0500", "relative_date": "12 years ago", "message_subject": "corrected study ids"}, {"id": "593d6fbab385716dc0a12f3fc95133e8b7479b37", "author_name": "Mark T. Holder", "author_email": "mtholder@gmail.com", "date": "Tue, 29 Apr 2014 20:05:19 -0500", "date_ISO_8601": "2014-04-29 20:05:19 -0500", "relative_date": "12 years ago", "message_subject": "initial commit with phylografter files from 29 Apr, 2014"}]}