--embed --agent-only pythonVersion 2.7.5+ pythonImplementation CPython All life ^ot:comment ^ot:ottId otu339411 otu339595 otu339434 otu339466 otu339957 otu339686 otu339774 otu339689 otu340061 tree5040 Tree was incorrectly rooted. Fixed 23 July 2014 (JWB). Laura Katz Joseph W. Brown 93302 cellular organisms false pg_2398 Wu D., Hugenholtz P., Mavromatis K., Pukall R., Dalin E., Ivanova N.N., Kunin V., Goodwin L., Wu M., Tindall B.J., Hooper S.D., Pati A., Lykidis A., Spring S., Anderson I.J., D'haeseleer P., Zemla A., Singer M., Lapidus A., Nolan M., Copeland A., Chen F., Cheng J., Lucas S., Kerfeld C., Lang E., Gronow S., Chain P., Bruce D., Rubin E.M., Kyrpides N.C., Klenk H., Eisen J.A. 2009. A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea. Nature 462 (7276): 1056-1060. 2009 Ehrlichia ruminantium str. Gardel 787391 Ehrlichia ruminantium str. Gardel Tl428002 Dichelobacter nodosus VCS1703A 351439 Dichelobacter nodosus VCS1703A Tl428003 Dehalococcoides sp. BAV1 379083 Dehalococcoides sp. BAV1 Tl428004 Corynebacterium efficiens YS 314 724680 Corynebacterium efficiens YS-314 Tl428005 Neisseria meningitidis Z2491 239091 Neisseria meningitidis Z2491 Tl428006 Clostridium beijerinckii NCIMB 8052 619368 Clostridium beijerinckii NCIMB 8052 Tl428007 Conexibacter woesei 720138 Conexibacter woesei Tl428008 Leptothrix cholodnii sp. 6 4775686 Leptothrix cholodnii SP-6 Tl428009 Leptotrichia buccalis 538739 Leptotrichia buccalis Tl428010 Gramella forsetii KT0803 490508 Gramella forsetii KT0803 Tl428011 Finegoldia magna ATCC 29328 1050727 Finegoldia magna ATCC 29328 Tl428012 Synechococcus sp. WH 7803 688803 Synechococcus sp. WH 7803 Tl428013 Baumannia cicadellinicola str. Hc Homalodisca coagulata 4790672 Candidatus Baumannia cicadellinicola Tl428014 Desulfovibrio desulfuricans subsp. desulfuricans str. G20 211100 Desulfovibrio alaskensis G20 Tl428015 Streptococcus thermophilus LMG 18311 792116 Streptococcus thermophilus LMG 18311 Tl428016 Elusimicrobium minutum Pei191 391009 Elusimicrobium minutum Pei191 Tl428017 Yersinia pseudotuberculosis PB1 957358 Yersinia pseudotuberculosis PB1/+ Tl428018 Synechococcus sp. JA-3-3Ab 318863 Synechococcus sp. JA-3-3Ab Tl428019 Bordetella bronchiseptica RB50 133236 Bordetella bronchiseptica RB50 Tl428020 Synechococcus elongatus PCC 6301 761880 Synechococcus elongatus PCC 6301 Tl428021 Campylobacter jejuni subsp. jejuni 81116 840506 Campylobacter jejuni subsp. jejuni 81116 Tl428022 Chlamydia trachomatis 434 Bu 41358 Chlamydia trachomatis Tl428023 Lactobacillus johnsonii NCC 533 133241 Lactobacillus johnsonii NCC 533 Tl428024 Salmonella enterica subsp. enterica serovar Typhi str. Ty2 735034 Salmonella enterica subsp. enterica serovar Typhi str. Ty2 Tl428025 Shewanella baltica OS155 476163 Shewanella baltica OS155 Tl428026 Clostridium botulinum A3 str. Loch Maree 719586 Clostridium botulinum A3 str. Loch Maree Tl428027 Streptococcus agalactiae A909 607801 Streptococcus agalactiae A909 Tl428028 Yersinia pseudotuberculosis YPIII 957361 Yersinia pseudotuberculosis YPIII Tl428029 Streptococcus pneumoniae R6 1024091 Streptococcus pneumoniae R6 Tl428030 Clostridium botulinum B1 str. Okra 719576 Clostridium botulinum B1 str. Okra Tl428031 Haemophilus somnus 129PT 86437 Haemophilus somnus 129PT Tl428032 Candidatus Protochlamydia amoebophila UWE25 698513 Candidatus Protochlamydia amoebophila UWE25 Tl428033 Roseiflexus castenholzii DSM 13941 710109 Roseiflexus castenholzii DSM 13941 Tl428034 Hahella chejuensis KCTC 2396 622304 Hahella chejuensis KCTC 2396 Tl428035 Leptospira interrogans serovar Copenhageni str. Fiocruz L1 130 349131 Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 Tl428036 Burkholderia mallei ATCC 23344 306841 Burkholderia mallei ATCC 23344 Tl428037 Chromobacterium violaceum ATCC 12472 602877 Chromobacterium violaceum ATCC 12472 Tl428038 Acidobacteria bacterium Ellin345 4791144 Candidatus Koribacter versatilis Ellin345 Tl428039 Nocardiopsis dassonvillei 176926 Nocardiopsis dassonvillei Tl428040 Streptococcus pyogenes MGAS2096 56685 Streptococcus pyogenes MGAS2096 Tl428041 Lactobacillus brevis ATCC 367 579786 Lactobacillus brevis ATCC 367 Tl428042 Sulfurovum sp. NBC37 1 4775312 Sulfurovum sp. NBC37-1 Tl428043 Streptococcus pyogenes MGAS6180 149095 Streptococcus pyogenes MGAS6180 Tl428044 Ralstonia eutropha JMP134 792108 Ralstonia eutropha JMP134 Tl428045 Brucella suis 1330 692274 Brucella suis 1330 Tl428046 Francisella tularensis subsp. tularensis SCHU S4 1058390 Francisella tularensis subsp. tularensis SCHU S4 Tl428047 Chlorobium limicola DSM 245 845140 Chlorobium limicola DSM 245 Tl428048 Mycoplasma pulmonis UAB CTIP 795275 Mycoplasma pulmonis UAB CTIP Tl428049 Nocardia farcinica IFM 10152 1028146 Nocardia farcinica IFM 10152 Tl428050 Azorhizobium caulinodans ORS 571 1078826 Azorhizobium caulinodans ORS 571 Tl428051 Anaerococcus prevotii 210969 Anaerococcus prevotii Tl428052 Mannheimia succiniciproducens MBEL55E 613393 Mannheimia succiniciproducens MBEL55E Tl428053 Brucella melitensis biovar Abortus 2308 1038693 Brucella melitensis biovar Abortus 2308 Tl428054 Haemophilus influenzae PittGG 713838 Haemophilus influenzae PittGG Tl428055 Shewanella baltica OS195 216404 Shewanella baltica OS195 Tl428056 Staphylococcus aureus subsp. aureus COL 316894 Staphylococcus aureus subsp. aureus COL Tl428057 Gluconobacter oxydans 621H 106963 Gluconobacter oxydans 621H Tl428058 Escherichia coli UTI89 62553 Escherichia coli UTI89 Tl428059 Arthrobacter aurescens TC1 744977 Arthrobacter aurescens TC1 Tl428060 Caulobacter sp. K31 181615 Caulobacter sp. K31 Tl428061 Burkholderia phytofirmans PsJN 582114 Burkholderia phytofirmans PsJN Tl428062 Pseudomonas syringae pv. tomato str. DC3000 341792 Pseudomonas syringae pv. tomato str. DC3000 Tl428063 Wolbachia pipientis 379973 Wolbachia pipientis Tl428064 Pseudomonas putida KT2440 197146 Pseudomonas putida KT2440 Tl428065 Clavibacter michiganensis subsp. michiganensis NCPPB 382 271819 Clavibacter michiganensis subsp. michiganensis NCPPB 382 Tl428066 Escherichia coli str. K12 substr DH10B 232554 Escherichia coli K-12 Tl428067 Salmonella enterica subsp. enterica serovar Typhi str. CT18 210852 Salmonella enterica subsp. enterica serovar Typhi str. CT18 Tl428068 Sebaldella termitidis 987869 Sebaldella termitidis Tl428069 Halorhodospira halophila SL1 535975 Halorhodospira halophila SL1 Tl428070 Psychrobacter sp. PRwf-1 587504 Psychrobacter sp. PRwf-1 Tl428071 Clavibacter michiganensis subsp. sepedonicus 174625 Clavibacter michiganensis subsp. sepedonicus Tl428072 Dehalococcoides ethenogenes 195 1073578 Dehalococcoides ethenogenes 195 Tl428073 Prochlorococcus marinus subsp. marinus str. CCMP1375 423144 Prochlorococcus marinus subsp. marinus str. CCMP1375 Tl428074 Cupriavidus taiwanensis 863452 Cupriavidus taiwanensis Tl428075 Acidovorax sp. JS42 893430 Acidovorax sp. JS42 Tl428076 Haliangium ochraceum 652441 Haliangium ochraceum Tl428077 Methylobacillus flagellatus KT 646867 Methylobacillus flagellatus KT Tl428078 Acinetobacter baumannii ACICU 907304 Acinetobacter baumannii ACICU Tl428079 Leptospira interrogans serovar Lai str. 56601 994267 Leptospira interrogans serovar Lai str. 56601 Tl428080 Mycoplasma hyopneumoniae 7448 455769 Mycoplasma hyopneumoniae 7448 Tl428081 Shewanella sp. MR-7 915503 Shewanella sp. MR-7 Tl428082 Bordetella avium 197N 273958 Bordetella avium 197N Tl428083 Chlamydia trachomatis A HAR 13 322857 Chlamydia trachomatis A/HAR-13 Tl428084 Bartonella tribocorum CIP 105476 834239 Bartonella tribocorum CIP 105476 Tl428085 Acidovorax avenae subsp. citrulli AAC00 1 1074474 Acidovorax avenae Tl428086 Shigella dysenteriae Sd197 1091301 Shigella dysenteriae Sd197 Tl428087 Denitrovibrio acetiphilus 915520 Denitrovibrio acetiphilus Tl428088 Staphylococcus aureus subsp. aureus MSSA476 283269 Staphylococcus aureus subsp. aureus MSSA476 Tl428089 Candidatus Blochmannia floridanus Tl428090 Syntrophomonas wolfei subsp. wolfei str. Goettingen 563276 Syntrophomonas wolfei subsp. wolfei str. Goettingen Tl428091 Rickettsia typhi str. Wilmington 602657 Rickettsia typhi str. Wilmington Tl428092 Pseudomonas stutzeri A1501 544793 Pseudomonas stutzeri A1501 Tl428093 Lactobacillus casei BL23 806498 Lactobacillus casei BL23 Tl428094 Prochlorococcus marinus str. MIT 9515 1000060 Prochlorococcus marinus str. MIT 9515 Tl428095 Paracoccus denitrificans PD1222 215157 Paracoccus denitrificans PD1222 Tl428096 Mycobacterium avium 104 677345 Mycobacterium avium 104 Tl428097 Prochlorococcus marinus str. MIT 9312 440057 Prochlorococcus marinus str. MIT 9312 Tl428098 Synechococcus sp. CC9902 187064 Synechococcus sp. CC9902 Tl428099 Synechococcus sp. PCC 7002 679716 Synechococcus sp. PCC 7002 Tl428100 Pseudomonas aeruginosa PAO1 958299 Pseudomonas aeruginosa PAO1 Tl428101 Porphyromonas gingivalis ATCC 33277 305955 Porphyromonas gingivalis ATCC 33277 Tl428102 Pasteurella multocida subsp. multocida str. Pm70 724317 Pasteurella multocida subsp. multocida str. Pm70 Tl428103 Xanthomonas oryzae pv. oryzae MAFF 311018 476733 Xanthomonas oryzae pv. oryzae MAFF 311018 Tl428104 Pseudomonas mendocina ymp 289875 Pseudomonas mendocina ymp Tl428105 Synechococcus sp. RCC307 187065 Synechococcus sp. RCC307 Tl428106 Synechococcus sp. WH 8102 932314 Synechococcus sp. WH 8102 Tl428107 Bacillus clausii KSM K16 337359 Bacillus clausii KSM-K16 Tl428108 Alkaliphilus oremlandii OhILAs 145289 Alkaliphilus oremlandii OhILAs Tl428109 Pelobacter carbinolicus DSM 2380 741363 Pelobacter carbinolicus DSM 2380 Tl428110 Chlorobium phaeobacteroides BS1 1013159 Chlorobium phaeobacteroides BS1 Tl428111 Gluconacetobacter diazotrophicus PAl 5 953173 Gluconacetobacter diazotrophicus PAl 5 Tl428112 Shewanella putrefaciens CN 32 377327 Shewanella putrefaciens CN-32 Tl428113 Yersinia pestis biovar Microtus str. 91001 822420 Yersinia pestis biovar Microtus str. 91001 Tl428114 Atopobium parvulum 1068920 Atopobium parvulum Tl428115 Tropheryma whipplei str. Twist 4770022 Tropheryma whipplei str. Twist Tl428116 Burkholderia ambifaria MC40 6 55779 Burkholderia ambifaria MC40-6 Tl428117 Streptococcus suis 98HAH33 721148 Streptococcus suis 98HAH33 Tl428118 Lactobacillus plantarum WCFS1 433663 Lactobacillus plantarum WCFS1 Tl428119 Mycoplasma genitalium G37 125688 Mycoplasma genitalium G37 Tl428120 Nostoc sp. PCC 7120 913397 Nostoc sp. PCC 7120 Tl428121 Burkholderia sp. 383 Tl428122 Yersinia enterocolitica subsp. enterocolitica 8081 1057543 Yersinia enterocolitica subsp. enterocolitica 8081 Tl428123 Rhodopseudomonas palustris HaA2 480177 Rhodopseudomonas palustris HaA2 Tl428124 Verminephrobacter eiseniae EF01 2 540748 Verminephrobacter eiseniae Tl428125 Syntrophobacter fumaroxidans MPOB 563271 Syntrophobacter fumaroxidans MPOB Tl428126 Leptospira borgpetersenii serovar Hardjo-bovis L550 449323 Leptospira borgpetersenii serovar Hardjo-bovis str. L550 Tl428127 Mycobacterium tuberculosis CDC1551 232558 Mycobacterium tuberculosis CDC1551 Tl428128 Sorangium cellulosum So ce 56 275853 Sorangium cellulosum So ce56 Tl428129 Jonesia denitrificans 816534 Jonesia denitrificans Tl428130 Xanthomonas campestris pv. campestris str. 8004 157434 Xanthomonas campestris pv. campestris str. 8004 Tl428131 Chlorobium phaeobacteroides DSM 266 67852 Chlorobium phaeobacteroides DSM 266 Tl428132 Petrotoga mobilis SJ95 428768 Petrotoga mobilis SJ95 Tl428133 Lactobacillus reuteri F275 537659 Lactobacillus reuteri F275 Tl428134 Thermobaculum terrenum 4745145 Thermobaculum terrenum Tl428135 Streptococcus pyogenes SSI 1 254747 Streptococcus pyogenes SSI-1 Tl428136 Tropheryma whipplei TW08 27 4770023 Tropheryma whipplei TW08/27 Tl428137 Xanthomonas campestris pv. campestris str. ATCC 33913 377578 Xanthomonas campestris pv. campestris str. ATCC 33913 Tl428138 Serratia proteamaculans 568 1030764 Serratia proteamaculans 568 Tl428139 Oceanobacillus iheyensis HTE831 486370 Oceanobacillus iheyensis HTE831 Tl428140 Pseudoalteromonas atlantica T6c 95807 Pseudoalteromonas atlantica T6c Tl428141 Rhodococcus sp. RHA1 877779 Rhodococcus jostii RHA1 Tl428142 Orientia tsutsugamushi str. Ikeda 848852 Orientia tsutsugamushi str. Ikeda Tl428143 Renibacterium salmoninarum ATCC 33209 362159 Renibacterium salmoninarum ATCC 33209 Tl428144 Burkholderia mallei NCTC 10247 501307 Burkholderia mallei NCTC 10247 Tl428145 Mycoplasma hyopneumoniae J 763623 Mycoplasma hyopneumoniae J Tl428146 Pseudomonas fluorescens Pf 5 437023 Pseudomonas protegens Pf-5 Tl428147 Xanthomonas axonopodis pv. citri str. 306 427731 Xanthomonas axonopodis pv. citri str. 306 Tl428148 Frankia sp. EAN1pec 25930 Frankia sp. EAN1pec Tl428149 Chlorobium tepidum TLS 775069 Chlorobium tepidum TLS Tl428150 Burkholderia phymatum STM815 915183 Burkholderia phymatum STM815 Tl428151 Rickettsia prowazekii str. Madrid E 92213 Rickettsia prowazekii str. Madrid E Tl428152 Anaeromyxobacter sp. Fw109-5 60668 Anaeromyxobacter sp. Fw109-5 Tl428153 Thiobacillus denitrificans ATCC 25259 744188 Thiobacillus denitrificans ATCC 25259 Tl428154 Bradyrhizobium japonicum USDA 110 953841 Bradyrhizobium diazoefficiens USDA 110 Tl428155 Geobacter lovleyi SZ 625623 Geobacter lovleyi SZ Tl428156 Chlamydophila pneumoniae TW 183 773713 Chlamydophila pneumoniae TW-183 Tl428157 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 378591 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 Tl428158 Rhodobacter sphaeroides ATCC 17029 587505 Rhodobacter sphaeroides ATCC 17029 Tl428159 Geobacter metallireducens GS 15 672392 Geobacter metallireducens GS-15 Tl428160 Bacillus weihenstephanensis KBAB4 1060376 Bacillus weihenstephanensis KBAB4 Tl428161 Thermus thermophilus HB27 333164 Thermus thermophilus HB27 Tl428162 Lactobacillus casei ATCC 334 161560 Lactobacillus casei ATCC 334 Tl428163 Leifsonia xyli subsp. xyli str. CTCB07 947435 Leifsonia xyli subsp. xyli str. CTCB07 Tl428164 Klebsiella pneumoniae subsp. pneumoniae MGH 78578 220599 Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Tl428165 Prochlorococcus marinus str. MIT 9211 460605 Prochlorococcus marinus str. MIT 9211 Tl428166 Enterococcus faecalis V583 14326 Enterococcus faecalis V583 Tl428167 Brucella abortus biovar 1 str. 9-941 484931 Brucella abortus bv. 1 str. 9-941 Tl428168 Arthrobacter sp. FB24 272435 Arthrobacter sp. FB24 Tl428169 Neisseria gonorrhoeae NCCP11945 557918 Neisseria gonorrhoeae NCCP11945 Tl428170 Chloroherpeton thalassium ATCC 35110 386867 Chloroherpeton thalassium ATCC 35110 Tl428171 Clostridium botulinum B str. Eklund 17B 908243 Clostridium botulinum B str. Eklund 17B Tl428172 Mycoplasma mobile 163K 7030 Mycoplasma mobile 163K Tl428173 Salmonella enterica subsp. arizonae serovar 62 z4 z23 489643 Salmonella enterica subsp. arizonae serovar 62:z4,z23:- Tl428174 Brucella melitensis 16M 1054415 Brucella melitensis Tl428175 Anabaena variabilis ATCC 29413 376279 Anabaena variabilis ATCC 29413 Tl428176 Brucella canis ATCC 23365 676151 Brucella canis ATCC 23365 Tl428177 Coxiella burnetii RSA 331 386467 Coxiella burnetii RSA 331 Tl428178 Vibrio parahaemolyticus RIMD 2210633 383129 Vibrio parahaemolyticus RIMD 2210633 Tl428179 Thermosipho melanesiensis BI429 389584 Thermosipho melanesiensis BI429 Tl428180 Thiomicrospira crunogena XCL 2 89144 Thiomicrospira crunogena XCL-2 Tl428181 Lysinibacillus sphaericus C3 41 480707 Lysinibacillus sphaericus C3-41 Tl428182 Vibrio harveyi ATCC BAA 1116 358284 Vibrio campbellii ATCC BAA-1116 Tl428183 Shigella boydii CDC 3083 94 796094 Shigella boydii CDC 3083-94 Tl428184 Mycoplasma capricolum subsp. capricolum ATCC 27343 2889 Mycoplasma capricolum subsp. capricolum ATCC 27343 Tl428185 Nitrobacter hamburgensis X14 301225 Nitrobacter hamburgensis X14 Tl428186 Xylanimonas cellulosilytica 556991 Xylanimonas cellulosilytica Tl428187 Francisella tularensis subsp. holarctica FTNF002 00 1059182 Francisella tularensis subsp. holarctica FTNF002-00 Tl428188 Geobacter sulfurreducens PCA 103413 Geobacter sulfurreducens PCA Tl428189 Methylibium petroleiphilum PM1 4775635 Methylibium petroleiphilum PM1 Tl428190 Bacillus halodurans C 125 327700 Bacillus halodurans C-125 Tl428191 Geobacter uraniumreducens Rf4 321746 Geobacter uraniireducens Rf4 Tl428192 Candidatus Desulforudis audaxviator MP104C 581464 Candidatus Desulforudis audaxviator MP104C Tl428193 Shewanella halifaxensis HAW EB4 368716 Shewanella halifaxensis HAW-EB4 Tl428194 Treponema denticola ATCC 35405 205400 Treponema denticola ATCC 35405 Tl428195 Staphylococcus aureus subsp. aureus Mu50 797806 Staphylococcus aureus subsp. aureus Mu50 Tl428196 Lactobacillus gasseri ATCC 33323 502406 Lactobacillus gasseri ATCC 33323 Tl428197 Bordetella petrii DSM 12804 979013 Bordetella petrii DSM 12804 Tl428198 Rhodopirellula baltica SH 1 298147 Rhodopirellula baltica SH 1 Tl428199 Listeria monocytogenes EGD e 998464 Listeria monocytogenes EGD-e Tl428200 Shewanella pealeana ATCC 700345 163791 Shewanella pealeana ATCC 700345 Tl428201 Psychrobacter arcticus 273 4 988603 Psychrobacter arcticus 273-4 Tl428202 Xanthomonas campestris pv. vesicatoria str. 85 10 187072 Xanthomonas campestris pv. vesicatoria str. 85-10 Tl428203 Chlamydophila abortus S26 3 566500 Chlamydophila abortus S26/3 Tl428204 Haemophilus influenzae PittEE 713835 Haemophilus influenzae PittEE Tl428205 Shewanella sediminis HAW EB3 775503 Shewanella sediminis HAW-EB3 Tl428206 Dyadobacter fermentans 610677 Dyadobacter fermentans Tl428207 Bacillus pumilus SAFR 032 561927 Bacillus pumilus SAFR-032 Tl428208 Fusobacterium nucleatum subsp. nucleatum ATCC 25586 231525 Fusobacterium nucleatum subsp. nucleatum ATCC 25586 Tl428209 Clostridium novyi NT 275342 Clostridium novyi NT Tl428210 Chlamydophila felis Fe C 56 698519 Chlamydophila felis Fe/C-56 Tl428211 Streptococcus sanguinis SK36 1018562 Streptococcus sanguinis SK36 Tl428212 Vibrio cholerae O1 biovar eltor str. N16961 205391 Vibrio cholerae O1 biovar El Tor str. N16961 Tl428213 Polaromonas sp. JS666 562974 Polaromonas sp. JS666 Tl428214 Streptococcus pyogenes str. Manfredo 771191 Streptococcus pyogenes str. Manfredo Tl428215 Streptococcus pneumoniae TIGR4 1089074 Streptococcus pneumoniae TIGR4 Tl428216 Nostoc punctiforme PCC 73102 134995 Nostoc punctiforme PCC 73102 Tl428217 Synechocystis sp. PCC 6803 5341975 Synechocystis sp. PCC 6803 (species in order Chroococcales) Tl428218 Clostridium botulinum A str. ATCC 19397 461756 Clostridium botulinum A str. ATCC 19397 Tl428219 Yersinia pestis Nepal516 894988 Yersinia pestis Nepal516 Tl428220 Streptococcus pneumoniae Hungary19A 6 504566 Streptococcus pneumoniae Hungary19A-6 Tl428221 Mycoplasma agalactiae PG2 468606 Mycoplasma agalactiae PG2 Tl428222 Ureaplasma parvum serovar 3 str. ATCC 700970 258366 Ureaplasma parvum serovar 3 str. ATCC 700970 Tl428223 Dinoroseobacter shibae DFL 12 880918 Dinoroseobacter shibae DFL 12 Tl428224 Rickettsia akari str. Hartford 69973 Rickettsia akari str. Hartford Tl428225 Candidatus Pelagibacter ubique HTCC1062 4778187 Candidatus Pelagibacter ubique HTCC1062 Tl428226 Fervidobacterium nodosum Rt17 B1 1001339 Fervidobacterium nodosum Tl428227 Saccharophagus degradans 2 40 340495 Saccharophagus degradans 2-40 Tl428228 Yersinia pestis KIM 276884 Yersinia pestis KIM10+ Tl428229 Escherichia coli CFT073 601731 Escherichia coli CFT073 Tl428230 Sulfurimonas denitrificans DSM 1251 569599 Sulfurimonas denitrificans DSM 1251 Tl428231 Bacillus cereus E33L 873215 Bacillus cereus E33L Tl428232 Francisella tularensis subsp. mediasiatica FSC147 834782 Francisella tularensis subsp. mediasiatica FSC147 Tl428233 Bartonella henselae str. Houston 1 450951 Bartonella henselae str. Houston-1 Tl428234 Acholeplasma laidlawii PG 8A 874249 Acholeplasma laidlawii Tl428235 Exiguobacterium sibiricum 255 15 129852 Exiguobacterium sibiricum 255-15 Tl428236 Streptococcus suis 05ZYH33 721145 Streptococcus suis 05ZYH33 Tl428237 Desulfotalea psychrophila LSv54 10792 Desulfotalea psychrophila LSv54 Tl428238 Mycobacterium vanbaalenii PYR 1 1075370 Mycobacterium vanbaalenii PYR-1 Tl428239 Pseudomonas syringae pv. phaseolicola 1448A 59731 Pseudomonas syringae pv. phaseolicola 1448A Tl428240 Staphylococcus aureus subsp. aureus Mu3 356781 Staphylococcus aureus subsp. aureus Mu3 Tl428241 Streptococcus pneumoniae CGSP14 830466 Streptococcus pneumoniae CGSP14 Tl428242 Ralstonia pickettii 12J 791878 Ralstonia pickettii 12J Tl428243 Streptobacillus moniliformis 841419 Streptobacillus moniliformis Tl428244 Neisseria meningitidis FAM18 252031 Neisseria meningitidis FAM18 Tl428245 Thermotoga sp. RQ2 891047 Thermotoga sp. RQ2 Tl428246 Citrobacter koseri ATCC BAA 895 16131 Citrobacter koseri ATCC BAA-895 Tl428247 Staphylococcus aureus subsp. aureus MW2 685951 Staphylococcus aureus subsp. aureus MW2 Tl428248 Ralstonia eutropha H16 875674 Ralstonia eutropha H16 Tl428249 Shigella flexneri 2a str. 2457T 586765 Shigella flexneri 2a str. 2457T Tl428250 Escherichia coli str. K12 substr MG1655 232554 Escherichia coli K-12 Tl428251 Thermobispora bispora 751329 Thermobispora bispora Tl428252 Thermomonospora curvata 802001 Thermomonospora curvata Tl428253 Chlamydophila pneumoniae J138 1001672 Chlamydophila pneumoniae J138 Tl428254 Neisseria meningitidis MC58 239089 Neisseria meningitidis MC58 Tl428255 Silicibacter sp. TM1040 744186 Ruegeria sp. TM1040 Tl428256 Coxiella burnetii Dugway 5J108 111 117689 Coxiella burnetii Dugway 5J108-111 Tl428257 Shigella boydii Sb227 1091291 Shigella boydii Sb227 Tl428258 Nakamurella multipartita 928874 Nakamurella multipartita Tl428259 Sphingopyxis alaskensis RB2256 220183 Sphingopyxis alaskensis RB2256 Tl428260 Listeria innocua Clip11262 220620 Listeria innocua Clip11262 Tl428261 Synechococcus sp. CC9311 686881 Synechococcus sp. CC9311 Tl428262 Acidiphilium cryptum JF 5 373591 Acidiphilium cryptum Tl428263 Streptococcus agalactiae 2603V R 444917 Streptococcus agalactiae 2603V/R Tl428264 Rhodothermus marinus 457134 Rhodothermus marinus Tl428265 Sanguibacter keddieii 774573 Sanguibacter keddieii Tl428266 Colwellia psychrerythraea 34H 462302 Colwellia psychrerythraea 34H Tl428267 Rhizobium etli CIAT 652 1073024 Rhizobium etli CIAT 652 Tl428268 Staphylococcus aureus RF122 135652 Staphylococcus aureus RF122 Tl428269 Maricaulis maris MCS10 213727 Maricaulis maris MCS10 Tl428270 Clostridium botulinum E3 str. Alaska E43 908247 Clostridium botulinum E3 str. Alaska E43 Tl428271 Rickettsia rickettsii str. Iowa 885012 Rickettsia rickettsii str. Iowa Tl428272 Chlamydophila pneumoniae CWL029 853664 Chlamydophila pneumoniae CWL029 Tl428273 Gloeobacter violaceus PCC 7421 37488 Gloeobacter violaceus PCC 7421 Tl428274 Slackia heliotrinireducens 696845 Slackia heliotrinireducens Tl428275 Clostridium botulinum F str. Langeland 461752 Clostridium botulinum F str. Langeland Tl428276 Pelobacter propionicus DSM 2379 741372 Pelobacter propionicus DSM 2379 Tl428277 Haemophilus influenzae Rd KW20 640784 Haemophilus influenzae Rd KW20 Tl428278 Burkholderia cenocepacia AU 1054 203604 Burkholderia cenocepacia AU 1054 Tl428279 Marinomonas sp. MWYL1 655012 Marinomonas sp. MWYL1 Tl428280 Legionella pneumophila subsp. pneumophila str. Philadelphia 1 220613 Legionella pneumophila subsp. pneumophila str. Philadelphia 1 Tl428281 Buchnera aphidicola str. Cc Cinara cedri 271462 Buchnera aphidicola BCc Tl428282 Psychromonas ingrahamii 37 732486 Psychromonas ingrahamii 37 Tl428283 Streptococcus pyogenes MGAS5005 173021 Streptococcus pyogenes MGAS5005 Tl428284 Cyanothece sp. ATCC 51142 608236 Cyanothece sp. ATCC 51142 Tl428285 Rickettsia bellii OSU 85 389 362069 Rickettsia bellii OSU 85-389 Tl428286 Thermoanaerobacter pseudethanolicus ATCC 33223 680070 Thermoanaerobacter pseudethanolicus ATCC 33223 Tl428287 Haemophilus influenzae 86 028NP 22009 Haemophilus influenzae 86-028NP Tl428288 Rickettsia conorii str. Malish 7 92209 Rickettsia conorii str. Malish 7 Tl428289 Planctomyces limnophilus 839868 Planctomyces limnophilus Tl428290 Lawsonia intracellularis PHE MN1 00 731046 Lawsonia intracellularis PHE/MN1-00 Tl428291 Acidimicrobium ferrooxidans 1004025 Acidimicrobium ferrooxidans Tl428292 Clostridium phytofermentans ISDg 732477 Clostridium phytofermentans ISDg Tl428293 Brachyspira murdochii 502321 Brachyspira murdochii Tl428294 Francisella tularensis subsp. tularensis WY96 3418 205593 Francisella tularensis subsp. tularensis WY96-3418 Tl428295 Cryptobacterium curtum 10666 Cryptobacterium curtum Tl428296 Streptomyces coelicolor A3 2 954695 Streptomyces coelicolor A3(2) Tl428297 Gordonia bronchialis 74066 Gordonia bronchialis Tl428298 Porphyromonas gingivalis W83 919049 Porphyromonas gingivalis W83 Tl428299 Bordetella pertussis Tohama I 133240 Bordetella pertussis Tohama I Tl428300 Methylobacterium extorquens PA1 596639 Methylobacterium extorquens PA1 Tl428301 Methylacidiphilum infernorum V4 4795761 Methylacidiphilum infernorum V4 Tl428302 Delftia acidovorans SPH 1 163788 Delftia acidovorans SPH-1 Tl428303 Shewanella amazonensis SB2B 569594 Shewanella amazonensis SB2B Tl428304 Nitrosospira multiformis ATCC 25196 774060 Nitrosospira multiformis ATCC 25196 Tl428305 Carboxydothermus hydrogenoformans Z 2901 351437 Carboxydothermus hydrogenoformans Z-2901 Tl428306 Chlamydia muridarum Nigg 994509 Chlamydia muridarum Nigg Tl428307 Heliobacterium modesticaldum Ice1 473300 Heliobacterium modesticaldum Ice1 Tl428308 Mycobacterium sp. JLS 941230 Mycobacterium sp. JLS Tl428309 Pseudomonas aeruginosa PA7 421214 Pseudomonas aeruginosa PA7 Tl428310 Bacillus licheniformis ATCC 14580 516646 Bacillus licheniformis DSM 13 = ATCC 14580 Tl428311 Stackebrandtia nassauensis 398479 Stackebrandtia nassauensis Tl428312 Staphylococcus aureus subsp. aureus N315 797804 Staphylococcus aureus subsp. aureus N315 Tl428313 Magnetococcus sp. MC-1 79418 Magnetococcus marinus MC-1 Tl428314 Chlamydophila caviae GPIC 724713 Chlamydophila caviae GPIC Tl428315 Mycobacterium tuberculosis H37Rv 232551 Mycobacterium tuberculosis H37Rv Tl428316 Wolbachia endosymbiont strain TRS of Brugia malayi 9967 Wolbachia endosymbiont strain TRS of Brugia malayi Tl428317 Mycoplasma synoviae 53 333175 Mycoplasma synoviae 53 Tl428318 Brachybacterium faecium 241752 Brachybacterium faecium Tl428319 Methylobacterium sp. 4 46 561781 Methylobacterium sp. 4-46 Tl428320 Corynebacterium glutamicum ATCC 13032 685945 Corynebacterium glutamicum ATCC 13032 Tl428321 Burkholderia pseudomallei 1710b 1077963 Burkholderia pseudomallei 1710b Tl428322 Neisseria gonorrhoeae FA 1090 770027 Neisseria gonorrhoeae FA 1090 Tl428323 Candidatus Sulcia muelleri GWSS 4769128 Candidatus Sulcia muelleri GWSS Tl428324 Orientia tsutsugamushi Boryong 311552 Orientia tsutsugamushi str. Boryong Tl428325 Shewanella baltica OS185 927550 Shewanella baltica OS185 Tl428326 Synechococcus sp. JA-2-3B'a(2-13) 893405 Synechococcus sp. JA-2-3B'a(2-13) Tl428327 Shigella flexneri 2a str. 301 586768 Shigella flexneri 2a str. 301 Tl428328 Methylobacterium populi BJ001 864840 Methylobacterium populi BJ001 Tl428329 Streptococcus gordonii str. Challis substr CH1 482622 Streptococcus gordonii str. Challis substr. CH1 Tl428330 Bacillus thuringiensis serovar konkukian str. 97-27 594928 Bacillus thuringiensis serovar konkukian str. 97-27 Tl428331 Vibrio vulnificus CMCP6 641143 Vibrio vulnificus CMCP6 Tl428332 Campylobacter curvus 525 92 962616 Campylobacter curvus 525.92 Tl428333 Pseudomonas fluorescens PfO 1 607803 Pseudomonas fluorescens Pf0-1 Tl428334 Mycobacterium bovis BCG str. Pasteur 1173P2 57646 Mycobacterium bovis BCG str. Pasteur 1173P2 Tl428335 Moorella thermoacetica ATCC 39073 59737 Moorella thermoacetica ATCC 39073 Tl428336 Symbiobacterium thermophilum IAM 14863 640453 Symbiobacterium thermophilum IAM 14863 Tl428337 Bifidobacterium adolescentis ATCC 15703 349962 Bifidobacterium adolescentis ATCC 15703 Tl428338 Bacteroides fragilis YCH46 1052516 Bacteroides fragilis YCH46 Tl428339 Shewanella sp. MR-4 915504 Shewanella sp. MR-4 Tl428340 Rhodobacter sphaeroides 2 4 1 92204 Rhodobacter sphaeroides 2.4.1 Tl428341 Campylobacter jejuni subsp. doylei 269 97 559439 Campylobacter jejuni Tl428342 Prochlorococcus marinus str. AS9601 79672 Prochlorococcus marinus str. AS9601 Tl428343 Lactococcus lactis subsp. lactis Il1403 220605 Lactococcus lactis subsp. lactis Il1403 Tl428344 Leptospira biflexa serovar Patoc strain Patoc 1 Ames 250125 Leptospira biflexa serovar Patoc Tl428345 Beutenbergia cavernae 548813 Beutenbergia cavernae Tl428346 Rhizobium leguminosarum bv. viciae 3841 256373 Rhizobium leguminosarum bv. viciae 3841 Tl428347 Staphylococcus aureus subsp. aureus JH9 22805 Staphylococcus aureus subsp. aureus JH9 Tl428348 Prochlorococcus marinus subsp. pastoris str. CCMP1986 790087 Prochlorococcus marinus subsp. pastoris str. CCMP1986 Tl428349 Streptococcus pyogenes MGAS10750 56706 Streptococcus pyogenes MGAS10750 Tl428350 Prochlorococcus marinus str. MIT 9313 440053 Prochlorococcus marinus str. MIT 9313 Tl428351 Dehalococcoides sp. CBDB1 318330 Dehalococcoides sp. CBDB1 Tl428352 Burkholderia xenovorans LB400 406050 Burkholderia xenovorans LB400 Tl428353 Staphylococcus aureus subsp. aureus USA300 TCH1516 43811 Staphylococcus aureus subsp. aureus USA300_TCH1516 Tl428354 Synechococcus elongatus PCC 7942 319258 Synechococcus elongatus PCC 7942 Tl428355 Leptospira borgpetersenii serovar Hardjo-bovis JB197 449326 Leptospira borgpetersenii serovar Hardjo-bovis str. JB197 Tl428356 Bacillus anthracis str. Ames Ancestor 1025970 Bacillus anthracis str. 'Ames Ancestor' Tl428357 Caulobacter crescentus CB15 810549 Caulobacter crescentus CB15 Tl428358 Bacillus cereus subsp. cytotoxis NVH 391 98 718472 Bacillus cytotoxicus NVH 391-98 Tl428359 Shewanella woodyi ATCC 51908 794093 Shewanella woodyi ATCC 51908 Tl428360 Desulfohalobium retbaense 487573 Desulfohalobium retbaense Tl428361 Thermoanaerobacter sp. X514 864549 Thermoanaerobacter sp. X514 Tl428362 Rhodopseudomonas palustris CGA009 822797 Rhodopseudomonas palustris CGA009 Tl428363 Clostridium perfringens str. 13 353422 Clostridium perfringens str. 13 Tl428364 Chloroflexus aurantiacus J 10 fl 22888 Chloroflexus aurantiacus J-10-fl Tl428365 Erwinia tasmaniensis 5858 Erwinia tasmaniensis Tl428366 Salinispora tropica CNB 440 555394 Salinispora tropica CNB-440 Tl428367 Wolinella succinogenes DSM 1740 832895 Wolinella succinogenes DSM 1740 Tl428368 Francisella tularensis subsp. novicida U112 359436 Francisella novicida U112 Tl428369 Chlamydia trachomatis D UW 3 CX 953200 Chlamydia trachomatis D/UW-3/CX Tl428370 Mycobacterium smegmatis str. MC2 155 351441 Mycobacterium smegmatis str. MC2 155 Tl428371 Pseudomonas aeruginosa UCBPP PA14 256109 Pseudomonas aeruginosa UCBPP-PA14 Tl428372 Desulfotomaculum acetoxidans 409962 Desulfotomaculum acetoxidans Tl428373 Enterobacter sakazakii ATCC BAA 894 97517 Cronobacter sakazakii ATCC BAA-894 Tl428374 Burkholderia multivorans ATCC 17616 60937 Burkholderia multivorans ATCC 17616 Tl428375 Opitutus terrae PB90 1 604141 Opitutus terrae PB90-1 Tl428376 Francisella philomiragia subsp. philomiragia ATCC 25017 219537 Francisella philomiragia subsp. philomiragia ATCC 25017 Tl428377 Bacteroides fragilis NCTC 9343 327695 Bacteroides fragilis NCTC 9343 Tl428378 Rhizobium etli CFN 42 161119 Rhizobium etli CFN 42 Tl428379 Ehrlichia ruminantium str. Welgevonden 11873 Ehrlichia ruminantium str. Welgevonden Tl428380 Brucella ovis ATCC 25840 480703 Brucella ovis ATCC 25840 Tl428381 Geobacillus thermodenitrificans NG80 2 972111 Geobacillus thermodenitrificans Tl428382 Xylella fastidiosa M23 432603 Xylella fastidiosa M23 Tl428383 Campylobacter jejuni RM1221 746906 Campylobacter jejuni RM1221 Tl428384 Candidatus Vesicomyosocius okutanii HA 4790546 Candidatus Vesicomyosocius okutanii HA Tl428385 Pelodictyon luteolum DSM 273 377323 Chlorobium luteolum DSM 273 Tl428386 Saccharopolyspora erythraea NRRL 2338 495747 Saccharopolyspora erythraea NRRL 2338 Tl428387 Shewanella frigidimarina NCIMB 400 973887 Shewanella frigidimarina NCIMB 400 Tl428388 Mycoplasma arthritidis 158L3 1 125685 Mycoplasma arthritidis 158L3-1 Tl428389 Streptomyces griseus subsp. griseus NBRC 13350 194452 Streptomyces griseus subsp. griseus NBRC 13350 Tl428390 Pedobacter heparinus 112737 Pedobacter heparinus Tl428391 Bacillus subtilis subsp. subtilis str. 168 21367 Bacillus subtilis subsp. subtilis str. 168 Tl428392 Salmonella typhimurium LT2 973918 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Tl428393 Parvibaculum lavamentivorans DS 1 927547 Parvibaculum lavamentivorans DS-1 Tl428394 Synechococcus sp. CC9605 729493 Synechococcus sp. CC9605 Tl428395 Streptococcus pyogenes M1 GAS 771186 Streptococcus pyogenes M1 GAS Tl428396 Haemophilus somnus 2336 948000 Haemophilus somnus 2336 Tl428397 Sphaerobacter thermophilus 74085 Sphaerobacter thermophilus Tl428398 Pelotomaculum thermopropionicum SI 742079 Pelotomaculum thermopropionicum SI Tl428399 Clostridium kluyveri DSM 555 306004 Clostridium kluyveri DSM 555 Tl428400 Mesorhizobium loti MAFF303099 1061318 Mesorhizobium loti MAFF303099 Tl428401 Anaplasma phagocytophilum HZ 961231 Anaplasma phagocytophilum HZ Tl428402 Acaryochloris marina MBIC11017 434780 Acaryochloris marina MBIC11017 Tl428403 Listeria welshimeri serovar 6b str. SLCC5334 984127 Listeria welshimeri serovar 6b str. SLCC5334 Tl428404 Yersinia pseudotuberculosis IP 32953 832899 Yersinia pseudotuberculosis IP 32953 Tl428405 Staphylococcus aureus subsp. aureus JH1 22808 Staphylococcus aureus subsp. aureus JH1 Tl428406 Dechloromonas aromatica RCB 78282 Dechloromonas aromatica RCB Tl428407 Mycobacterium bovis AF2122 97 1065267 Mycobacterium bovis AF2122/97 Tl428408 Mycobacterium leprae TN 795267 Mycobacterium leprae TN Tl428409 Bacillus anthracis str. Sterne 697387 Bacillus anthracis str. Sterne Tl428410 Thermus thermophilus HB8 497277 Thermus thermophilus HB8 Tl428411 Streptococcus pneumoniae D39 388640 Streptococcus pneumoniae D39 Tl428412 Lactococcus lactis subsp. cremoris MG1363 892056 Lactococcus lactis subsp. cremoris MG1363 Tl428413 Thermobifida fusca YX 731365 Thermobifida fusca YX Tl428414 Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 935729 Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Tl428415 Prochlorococcus marinus str. NATL1A 473639 Prochlorococcus marinus str. NATL1A Tl428416 Campylobacter fetus subsp. fetus 82-40 962619 Campylobacter fetus subsp. fetus 82-40 Tl428417 Mycoplasma pneumoniae M129 795271 Mycoplasma pneumoniae M129 Tl428418 Streptococcus pyogenes MGAS315 955651 Streptococcus pyogenes MGAS315 Tl428419 Sinorhizobium medicae WSM419 679430 Sinorhizobium medicae WSM419 Tl428420 Streptococcus pyogenes MGAS9429 56693 Streptococcus pyogenes MGAS9429 Tl428421 Flavobacterium psychrophilum JIP02 86 268513 Flavobacterium psychrophilum JIP02/86 Tl428422 Ehrlichia canis str. Jake 617101 Ehrlichia canis str. Jake Tl428423 Lactobacillus sakei subsp. sakei 23K 663085 Lactobacillus sakei subsp. sakei 23K Tl428424 Xylella fastidiosa Temecula1 220052 Xylella fastidiosa Temecula1 Tl428425 Mycoplasma hyopneumoniae 232 404747 Mycoplasma hyopneumoniae 232 Tl428426 Neorickettsia sennetsu str. Miyayama 312218 Neorickettsia sennetsu str. Miyayama Tl428427 Clostridium acetobutylicum ATCC 824 953189 Clostridium acetobutylicum ATCC 824 Tl428428 Pseudomonas putida GB 1 375282 Pseudomonas putida GB-1 Tl428429 Campylobacter jejuni subsp. jejuni 81 176 559439 Campylobacter jejuni Tl428430 Staphylococcus epidermidis ATCC 12228 477169 Staphylococcus epidermidis ATCC 12228 Tl428431 Brucella suis ATCC 23445 789265 Brucella suis ATCC 23445 Tl428432 Granulibacter bethesdensis CGDNIH1 555938 Granulibacter bethesdensis CGDNIH1 Tl428433 Streptomyces avermitilis MA 4680 1050021 Streptomyces avermitilis MA-4680 Tl428434 Salmonella enterica subsp. enterica serovar Choleraesuis str. SC B67 944213 Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 Tl428435 Legionella pneumophila str. Corby 80862 Legionella pneumophila str. Corby Tl428436 Aeromonas salmonicida subsp. salmonicida A449 541765 Aeromonas salmonicida subsp. salmonicida A449 Tl428437 Ehrlichia chaffeensis str. Arkansas 607799 Ehrlichia chaffeensis str. Arkansas Tl428438 Thermanaerovibrio acidaminovorans 330557 Thermanaerovibrio acidaminovorans Tl428439 Candidatus Phytoplasma mali 306766 Candidatus Phytoplasma mali Tl428440 Bordetella parapertussis 12822 133237 Bordetella parapertussis 12822 Tl428441 Prochlorococcus marinus str. NATL2A 164933 Prochlorococcus marinus str. NATL2A Tl428442 Bacteroides thetaiotaomicron VPI 5482 41294 Bacteroides thetaiotaomicron Tl428443 Bartonella quintana str. Toulouse 450958 Bartonella quintana str. Toulouse Tl428444 Nitrosomonas eutropha C91 646047 Nitrosomonas eutropha C91 Tl428445 Corynebacterium glutamicum R 827756 Corynebacterium glutamicum R Tl428446 Clostridium difficile 630 953193 Clostridium difficile 630 Tl428447 Dethiosulfovibrio peptidovorans 715796 Dethiosulfovibrio peptidovorans Tl428448 Helicobacter pylori HPAG1 318985 Helicobacter pylori HPAG1 Tl428449 Shigella sonnei Ss046 1091288 Shigella sonnei Ss046 Tl428450 Mycobacterium tuberculosis F11 713998 Mycobacterium tuberculosis F11 Tl428451 Leuconostoc citreum KM20 151728 Leuconostoc citreum KM20 Tl428452 Cytophaga hutchinsonii ATCC 33406 672395 Cytophaga hutchinsonii ATCC 33406 Tl428453 Corynebacterium urealyticum DSM 7109 532734 Corynebacterium urealyticum DSM 7109 Tl428454 Staphylococcus aureus subsp. aureus NCTC 8325 987144 Staphylococcus aureus subsp. aureus NCTC 8325 Tl428455 Francisella tularensis subsp. holarctica OSU18 510358 Francisella tularensis subsp. holarctica OSU18 Tl428456 Meiothermus silvanus 864749 Meiothermus silvanus Tl428457 Meiothermus ruber 276560 Meiothermus ruber Tl428458 Escherichia coli SMS 3 5 992225 Escherichia coli SMS-3-5 Tl428459 Kangiella koreensis 943598 Kangiella koreensis Tl428460 Clostridium perfringens SM101 874954 Clostridium perfringens SM101 Tl428461 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 505544 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Tl428462 Rhodopseudomonas palustris BisB18 480166 Rhodopseudomonas palustris BisB18 Tl428463 Herminiimonas arsenicoxydans 514905 Herminiimonas arsenicoxydans Tl428464 Rhodospirillum rubrum ATCC 11170 672388 Rhodospirillum rubrum ATCC 11170 Tl428465 Deinococcus radiodurans R1 103411 Deinococcus radiodurans R1 Tl428466 Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 510255 Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 Tl428467 Chlorobaculum parvum NCIB 8327 386871 Chlorobaculum parvum NCIB 8327 Tl428468 Frankia sp. CcI3 569564 Frankia sp. CcI3 Tl428469 Rickettsia massiliae MTU5 214493 Rickettsia massiliae MTU5 Tl428470 Desulfitobacterium hafniense Y51 184301 Desulfitobacterium hafniense Y51 Tl428471 Spirosoma linguale 453264 Spirosoma linguale Tl428472 Nocardioides sp. JS614 1045104 Nocardioides sp. JS614 Tl428473 Saccharomonospora viridis 999747 Saccharomonospora viridis Tl428474 Bdellovibrio bacteriovorus HD100 703708 Bdellovibrio bacteriovorus HD100 Tl428475 Bifidobacterium longum DJO10A 86434 Bifidobacterium longum DJO10A Tl428476 Rhodopseudomonas palustris BisB5 480163 Rhodopseudomonas palustris BisB5 Tl428477 Rickettsia bellii RML369 C 415258 Rickettsia bellii RML369-C Tl428478 Mycoplasma penetrans HF 2 795259 Mycoplasma penetrans HF-2 Tl428479 Myxococcus xanthus DK 1622 351447 Myxococcus xanthus DK 1622 Tl428480 Stenotrophomonas maltophilia K279a 1038096 Stenotrophomonas maltophilia K279a Tl428481 Mycoplasma gallisepticum R 227134 Mycoplasma gallisepticum str. R Tl428482 Campylobacter hominis ATCC BAA 381 281455 Campylobacter hominis ATCC BAA-381 Tl428483 Novosphingobium aromaticivorans DSM 12444 424222 Novosphingobium aromaticivorans DSM 12444 Tl428484 Bradyrhizobium sp. ORS278 724754 Bradyrhizobium sp. ORS 278 Tl428485 Francisella tularensis subsp. tularensis FSC198 439270 Francisella tularensis subsp. tularensis FSC198 Tl428486 Helicobacter hepaticus ATCC 51449 618777 Helicobacter hepaticus ATCC 51449 Tl428487 Buchnera aphidicola str. Sg Schizaphis graminum 1090730 Buchnera aphidicola str. Sg (Schizaphis graminum) Tl428488 Bifidobacterium longum NCC2705 957437 Bifidobacterium longum NCC2705 Tl428489 Geodermatophilus obscurus 824343 Geodermatophilus obscurus Tl428490 Pseudomonas syringae pv. syringae B728a 86431 Pseudomonas syringae pv. syringae B728a Tl428491 Polynucleobacter necessarius STIR1 206794 Polynucleobacter necessarius subsp. necessarius STIR1 Tl428492 Alcanivorax borkumensis SK2 37386 Alcanivorax borkumensis SK2 Tl428493 Burkholderia mallei NCTC 10229 1011904 Burkholderia mallei NCTC 10229 Tl428494 Lactobacillus helveticus DPC 4571 262077 Lactobacillus helveticus DPC 4571 Tl428495 Treponema pallidum subsp. pallidum SS14 1092069 Treponema pallidum subsp. pallidum SS14 Tl428496 Aster yellows witches'-broom phytoplasma AYWB 1096681 Aster yellows witches'-broom phytoplasma AYWB Tl428497 Acinetobacter baumannii ATCC 17978 655015 Acinetobacter baumannii ATCC 17978 Tl428498 Borrelia hermsii DAH 199955 Borrelia hermsii DAH Tl428499 Marinobacter aquaeolei VT8 242084 Marinobacter aquaeolei VT8 Tl428500 Staphylococcus aureus subsp. aureus str. Newman 357114 Staphylococcus aureus subsp. aureus str. Newman Tl428501 Prochlorococcus marinus str. MIT 9301 1000056 Prochlorococcus marinus str. MIT 9301 Tl428502 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA 365 869778 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 Tl428503 Eggerthella lenta 696825 Eggerthella lenta Tl428504 Actinobacillus succinogenes 130Z 979197 Actinobacillus succinogenes 130Z Tl428505 Helicobacter pylori J99 133760 Helicobacter pylori J99 Tl428506 Mycobacterium gilvum PYR GCK 362285 Mycobacterium gilvum PYR-GCK Tl428507 Wolbachia endosymbiont of Drosophila melanogaster 239068 Wolbachia endosymbiont of Drosophila melanogaster Tl428508 Capnocytophaga ochracea 813827 Capnocytophaga ochracea Tl428509 Bacteroides vulgatus ATCC 8482 371999 Bacteroides vulgatus ATCC 8482 Tl428510 Veillonella parvula 528374 Veillonella parvula Tl428511 Rhodopseudomonas palustris TIE 1 991414 Rhodopseudomonas palustris TIE-1 Tl428512 Thermotoga lettingae TMO 83398 Thermotoga lettingae TMO Tl428513 Yersinia pestis Angola 735114 Yersinia pestis Angola Tl428514 Lactobacillus fermentum IFO 3956 717190 Lactobacillus fermentum IFO 3956 Tl428515 Burkholderia pseudomallei K96243 953197 Burkholderia pseudomallei K96243 Tl428516 Bartonella bacilliformis KC583 257687 Bartonella bacilliformis KC583 Tl428517 Staphylococcus epidermidis RP62A 859694 Staphylococcus epidermidis RP62A Tl428518 Pseudomonas putida W619 539771 Pseudomonas putida W619 Tl428519 Escherichia coli E24377A 36937 Escherichia coli E24377A Tl428520 Candidatus Amoebophilus asiaticus 5a2 4768029 Candidatus Amoebophilus asiaticus 5a2 Tl428521 Chlamydophila pneumoniae AR39 853668 Chlamydophila pneumoniae AR39 Tl428522 Rhodopseudomonas palustris BisA53 480169 Rhodopseudomonas palustris BisA53 Tl428523 Trichodesmium erythraeum IMS101 340510 Trichodesmium erythraeum IMS101 Tl428524 Zymomonas mobilis subsp. mobilis ZM4 698523 Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 Tl428525 Azoarcus sp. BH72 231148 Azoarcus sp. BH72 Tl428526 Chlorobium chlorochromatii CaD3 452866 Chlorobium chlorochromatii CaD3 Tl428527 Pediococcus pentosaceus ATCC 25745 367251 Pediococcus pentosaceus ATCC 25745 Tl428528 Escherichia coli O157 H7 str. Sakai 167422 Escherichia coli O157:H7 str. Sakai Tl428529 Buchnera aphidicola str. APS Acyrthosiphon pisum 231497 Buchnera aphidicola str. APS (Acyrthosiphon pisum) Tl428530 Syntrophus aciditrophicus SB 140429 Syntrophus aciditrophicus SB Tl428531 Propionibacterium acnes KPA171202 7026 Propionibacterium acnes KPA171202 Tl428532 Natranaerobius thermophilus JW NM WN LF 557511 Natranaerobius thermophilus Tl428533 Campylobacter jejuni subsp. jejuni NCTC 11168 687667 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 Tl428534 Erythrobacter litoralis HTCC2594 119414 Erythrobacter litoralis HTCC2594 Tl428535 Flavobacterium johnsoniae UW101 260722 Flavobacterium johnsoniae UW101 Tl428536 Yersinia pestis Antiqua 962610 Yersinia pestis Antiqua Tl428537 Vibrio fischeri ES114 849272 Vibrio fischeri ES114 Tl428538 Bacillus thuringiensis str. Al Hakam 862092 Bacillus thuringiensis str. Al Hakam Tl428539 Desulfomicrobium baculatum 4018041 Desulfomicrobium baculatum Tl428540 Alicyclobacillus acidocaldarius 1064409 Alicyclobacillus acidocaldarius Tl428541 Listeria monocytogenes str. 4b F2365 130060 Listeria monocytogenes serotype 4b str. F2365 Tl428542 Geobacillus kaustophilus HTA426 225726 Geobacillus kaustophilus HTA426 Tl428543 Burkholderia pseudomallei 668 1077960 Burkholderia pseudomallei 668 Tl428544 Streptococcus agalactiae NEM316 100373 Streptococcus agalactiae NEM316 Tl428545 Streptococcus pyogenes MGAS8232 356514 Streptococcus pyogenes MGAS8232 Tl428546 Kocuria rhizophila DC2201 300437 Kocuria rhizophila DC2201 Tl428547 Thermosynechococcus elongatus BP 1 130170 Thermosynechococcus elongatus BP-1 Tl428548 Chlamydia trachomatis L2b UCH 1 proctitis 427088 Chlamydia trachomatis L2b/UCH-1/proctitis Tl428549 Shewanella denitrificans OS217 347460 Shewanella denitrificans OS217 Tl428550 Streptococcus pyogenes MGAS10394 472997 Streptococcus pyogenes MGAS10394 Tl428551 Bradyrhizobium sp. BTAi1 185184 Bradyrhizobium sp. BTAi1 Tl428552 Rhodoferax ferrireducens T118 741379 Rhodoferax ferrireducens T118 Tl428553 Burkholderia thailandensis E264 90658 Burkholderia thailandensis E264 Tl428554 Kribbella flavida 276167 Kribbella flavida Tl428555 Mycoplasma mycoides subsp. mycoides SC str. PG1 795257 Mycoplasma mycoides subsp. mycoides SC str. PG1 Tl428556 Francisella tularensis subsp. holarctica 1072916 Francisella tularensis subsp. holarctica Tl428557 Acinetobacter baumannii SDF 307613 Acinetobacter baumannii SDF Tl428558 Akkermansia muciniphila ATCC BAA 835 39156 Akkermansia muciniphila Tl428559 Ralstonia solanacearum GMI1000 1024939 Ralstonia solanacearum GMI1000 Tl428560 Janthinobacterium sp. Marseille 675631 Janthinobacterium sp. Marseille Tl428561 Prosthecochloris vibrioformis DSM 265 67858 Chlorobium phaeovibrioides DSM 265 Tl428562 Photorhabdus luminescens subsp. laumondii TTO1 728711 Photorhabdus luminescens subsp. laumondii TTO1 Tl428563 Escherichia coli APEC O1 1021605 Escherichia coli APEC O1 Tl428564 Clostridium botulinum A str. ATCC 3502 659132 Clostridium botulinum A str. ATCC 3502 Tl428565 Sulfurospirillum deleyianum 574085 Sulfurospirillum deleyianum Tl428566 Thermotoga petrophila RKU 1 183077 Thermotoga petrophila RKU-1 Tl428567 Idiomarina loihiensis L2TR 476481 Idiomarina loihiensis L2TR Tl428568 Rhodobacter sphaeroides ATCC 17025 587509 Rhodobacter sphaeroides ATCC 17025 Tl428569 Cellulomonas flavigena 301680 Cellulomonas flavigena Tl428570 Shewanella loihica pv. 4 200007 Shewanella loihica PV-4 Tl428571 Sphingomonas wittichii RW1 1056256 Sphingomonas wittichii RW1 Tl428572 Chitinophaga pinensis 900436 Chitinophaga pinensis Tl428573 Alkalilimnicola ehrlichei MLHE 1 242940 Alkalilimnicola ehrlichii MLHE-1 Tl428574 Mycobacterium avium subsp. paratuberculosis K 10 848460 Mycobacterium avium subsp. paratuberculosis K-10 Tl428575 Clostridium perfringens ATCC 13124 353424 Clostridium perfringens ATCC 13124 Tl428576 Staphylococcus haemolyticus JCSC1435 111355 Staphylococcus haemolyticus JCSC1435 Tl428577 Lactococcus lactis subsp. cremoris SK11 220608 Lactococcus lactis subsp. cremoris SK11 Tl428578 Rickettsia canadensis str. McKiel 69969 Rickettsia canadensis str. McKiel Tl428579 Bacillus amyloliquefaciens FZB42 370090 Bacillus amyloliquefaciens FZB42 Tl428580 Caldicellulosiruptor saccharolyticus DSM 8903 371049 Caldicellulosiruptor saccharolyticus DSM 8903 Tl428581 Corynebacterium jeikeium K411 402801 Corynebacterium jeikeium K411 Tl428582 Xanthomonas oryzae pv. oryzae KACC10331 540065 Xanthomonas oryzae pv. oryzae KACC 10331 Tl428583 Ureaplasma parvum serovar 3 str. ATCC 27815 789937 Ureaplasma parvum serovar 3 str. ATCC 27815 Tl428584 Haemophilus ducreyi 35000HP 1065271 Haemophilus ducreyi 35000HP Tl428585 Streptococcus thermophilus CNRZ1066 993586 Streptococcus thermophilus CNRZ1066 Tl428586 Salinispora arenicola CNS 205 405681 Salinispora arenicola ATCC BAA-917 Tl428587 Sinorhizobium meliloti 1021 1061321 Sinorhizobium meliloti 1021 Tl428588 Actinobacillus pleuropneumoniae serovar 3 str. JL03 28145 Actinobacillus pleuropneumoniae serovar 3 str. JL03 Tl428589 Yersinia pseudotuberculosis IP 31758 735111 Yersinia pseudotuberculosis IP 31758 Tl428590 Shigella flexneri 5 str. 8401 989177 Shigella flexneri 5 str. 8401 Tl428591 Nitratiruptor sp. SB155 2 4775403 Nitratiruptor sp. SB155-2 Tl428592 Clostridium botulinum A str. Hall 461754 Clostridium botulinum A str. Hall Tl428593 Mycobacterium ulcerans Agy99 675335 Mycobacterium ulcerans Agy99 Tl428594 Helicobacter pylori 26695 133763 Helicobacter pylori 26695 Tl428595 Helicobacter acinonychis str. Sheeba 259613 Helicobacter acinonychis str. Sheeba Tl428596 Microcystis aeruginosa NIES 843 835746 Microcystis aeruginosa NIES-843 Tl428597 Streptococcus mutans UA159 802575 Streptococcus mutans UA159 Tl428598 Escherichia coli O157 H7 EDL933 273352 Escherichia coli O157:H7 str. EDL933 Tl428599 Escherichia coli 536 336391 Escherichia coli 536 Tl428600 Solibacter usitatus Ellin6076 51461 Candidatus Solibacter usitatus Ellin6076 Tl428601 Xylella fastidiosa 9a5c 771195 Xylella fastidiosa 9a5c Tl428602 Borrelia afzelii PKo 539774 Borrelia afzelii PKo Tl428603 Legionella pneumophila str. Paris 860720 Legionella pneumophila str. Paris Tl428604 Mycobacterium abscessus 809476 Mycobacterium abscessus Tl428605 Mesorhizobium sp. BNC1 295509 Chelativorans sp. BNC1 Tl428606 Polaromonas naphthalenivorans CJ2 612655 Polaromonas naphthalenivorans CJ2 Tl428607 Rickettsia felis URRWXCal2 25300 Rickettsia felis URRWXCal2 Tl428608 Ralstonia metallidurans CH34 406045 Cupriavidus metallidurans CH34 Tl428609 Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough 968867 Desulfovibrio vulgaris str. Hildenborough Tl428610 Chromohalobacter salexigens DSM 3043 272436 Chromohalobacter salexigens DSM 3043 Tl428611 Shewanella sp. W3 18 1 199617 Shewanella sp. W3-18-1 Tl428612 Candidatus Blochmannia pennsylvanicus str. BPEN Tl428613 Burkholderia cenocepacia MC0 3 290934 Burkholderia cenocepacia MC0-3 Tl428614 Rickettsia rickettsii str. Sheila Smith 621256 Rickettsia rickettsii str. 'Sheila Smith' Tl428615 Legionella pneumophila str. Lens 860729 Legionella pneumophila str. Lens Tl428616 Methylobacterium radiotolerans JCM 2831 348417 Methylobacterium radiotolerans JCM 2831 Tl428617 Thermoanaerobacter tengcongensis MB4 605111 Thermoanaerobacter tengcongensis MB4 Tl428618 Agrobacterium tumefaciens str. C58 601809 Agrobacterium fabrum str. C58 Tl428619 Aeromonas hydrophila subsp. hydrophila ATCC 7966 58146 Aeromonas hydrophila subsp. hydrophila ATCC 7966 Tl428620 Thermotoga maritima MSB8 205396 Thermotoga maritima MSB8 Tl428621 Cellvibrio japonicus Ueda107 719578 Cellvibrio japonicus Ueda107 Tl428622 Azoarcus sp. EbN1 816009 Aromatoleum aromaticum EbN1 Tl428623 Pseudoalteromonas haloplanktis TAC125 219433 Pseudoalteromonas haloplanktis TAC125 Tl428624 Borrelia burgdorferi B31 1068680 Borrelia burgdorferi B31 Tl428625 Herpetosiphon aurantiacus ATCC 23779 187093 Herpetosiphon aurantiacus DSM 785 Tl428626 Coxiella burnetii RSA 493 557735 Coxiella burnetii RSA 493 Tl428627 Alkaliphilus metalliredigenes QYMF 1052152 Alkaliphilus metalliredigens QYMF Tl428628 Campylobacter concisus 13826 962613 Campylobacter concisus 13826 Tl428629 Streptococcus pyogenes MGAS10270 224298 Streptococcus pyogenes MGAS10270 Tl428630 Anaplasma marginale str. St Maries 50839 Anaplasma marginale Tl428631 Methylococcus capsulatus str. Bath 103406 Methylococcus capsulatus str. Bath Tl428632 Erwinia carotovora subsp. atroseptica SCRI1043 566519 Pectobacterium atrosepticum SCRI1043 Tl428633 Polynucleobacter sp. QLW-P1DMWA-1 466524 Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 Tl428634 Corynebacterium diphtheriae NCTC 13129 655178 Corynebacterium diphtheriae NCTC 13129 Tl428635 Silicibacter pomeroyi DSS 3 721 Ruegeria pomeroyi DSS-3 Tl428636 Psychrobacter cryohalolentis K5 646041 Psychrobacter cryohalolentis K5 Tl428637 Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 340506 Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Tl428638 Burkholderia mallei SAVP1 501304 Burkholderia mallei SAVP1 Tl428639 Xanthobacter autotrophicus Py2 595958 Xanthobacter autotrophicus Py2 Tl428640 Streptosporangium roseum 751318 Streptosporangium roseum Tl428641 Borrelia garinii PBi 46488 Borrelia garinii PBi Tl428642 Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) 4790519 Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) Tl428643 Actinobacillus pleuropneumoniae L20 738287 Actinobacillus pleuropneumoniae serovar 5b str. L20 Tl428644 Clostridium tetani E88 703452 Clostridium tetani E88 Tl428645 Deinococcus geothermalis DSM 11300 19591 Deinococcus geothermalis DSM 11300 Tl428646 Candidatus Desulfococcus oleovorans Hxd3 638036 Desulfococcus oleovorans Hxd3 Tl428647 Magnetospirillum magneticum AMB 1 476728 Magnetospirillum magneticum AMB-1 Tl428648 Oenococcus oeni PSU 1 340502 Oenococcus oeni PSU-1 Tl428649 Brucella abortus S19 496196 Brucella abortus S19 Tl428650 Burkholderia ambifaria AMMD 979193 Burkholderia ambifaria AMMD Tl428651 Pseudomonas entomophila L48 111573 Pseudomonas entomophila L48 Tl428652 Mycobacterium sp. MCS 150639 Mycobacterium sp. MCS Tl428653 Sodalis glossinidius str. morsitans 257752 Sodalis glossinidius Tl428654 Xanthomonas campestris pv. campestris 625937 Xanthomonas campestris pv. campestris Tl428655 Acinetobacter baumannii AYE 307610 Acinetobacter baumannii AYE Tl428656 Prochlorococcus marinus str. MIT 9303 164938 Prochlorococcus marinus str. MIT 9303 Tl428657 Yersinia pestis CO92 289021 Yersinia pestis CO92 Tl428658 Sulfurihydrogenibium sp. YO3AOP1 304996 Sulfurihydrogenibium sp. YO3AOP1 Tl428659 Aquifex aeolicus VF5 1068688 Aquifex aeolicus VF5 Tl428660 Kineococcus radiotolerans SRS30216 731759 Kineococcus radiotolerans SRS30216 Tl428661 Ochrobactrum anthropi ATCC 49188 784437 Ochrobactrum anthropi ATCC 49188 Tl428662 Lactobacillus acidophilus NCFM 220596 Lactobacillus acidophilus NCFM Tl428663 Xanthomonas oryzae pv. oryzae PXO99A 257683 Xanthomonas oryzae pv. oryzae PXO99A Tl428664 Burkholderia vietnamiensis G4 617096 Burkholderia vietnamiensis G4 Tl428665 Burkholderia cenocepacia HI2424 203605 Burkholderia cenocepacia HI2424 Tl428666 Buchnera aphidicola str. Bp Baizongia pistaciae 953850 Buchnera aphidicola str. Bp (Baizongia pistaciae) Tl428667 Clostridium thermocellum ATCC 27405 480252 Clostridium thermocellum ATCC 27405 Tl428668 Beijerinckia indica subsp. indica ATCC 9039 626622 Beijerinckia indica subsp. indica ATCC 9039 Tl428669 Lactobacillus salivarius UCC118 571382 Lactobacillus salivarius UCC118 Tl428670 Shewanella sp. ANA-3 921181 Shewanella sp. ANA-3 Tl428671 Actinobacillus pleuropneumoniae serovar 7 str. AP76 878930 Actinobacillus pleuropneumoniae serovar 7 str. AP76 Tl428672 Staphylococcus aureus subsp. aureus USA300 954284 Staphylococcus aureus subsp. aureus USA300 Tl428673 Bacillus cereus ATCC 10987 307734 Bacillus cereus ATCC 10987 Tl428674 Mesoplasma florum L1 480146 Mesoplasma florum L1 Tl428675 Neisseria meningitidis 053442 743612 Neisseria meningitidis 053442 Tl428676 Nitrobacter winogradskyi Nb 255 174852 Nitrobacter winogradskyi Nb-255 Tl428677 Mycobacterium marinum M 256366 Mycobacterium marinum M Tl428678 Xylella fastidiosa M12 432606 Xylella fastidiosa M12 Tl428679 Arcobacter butzleri RM4018 1067886 Arcobacter butzleri RM4018 Tl428680 Staphylococcus aureus subsp. aureus MRSA252 283272 Staphylococcus aureus subsp. aureus MRSA252 Tl428681 Treponema pallidum subsp. pallidum str. Nichols 205389 Treponema pallidum subsp. pallidum str. Nichols Tl428682 Enterobacter sp. 638 599955 Enterobacter sp. 638 Tl428683 Onion yellows phytoplasma OY-M 138749 Onion yellows phytoplasma OY-M Tl428684 Anaeromyxobacter dehalogenans 2CP C 179323 Anaeromyxobacter dehalogenans Tl428685 Kytococcus sedentarius 720597 Kytococcus sedentarius Tl428686 Burkholderia pseudomallei 1106a 740063 Burkholderia pseudomallei 1106a Tl428687 Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis 1065772 Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis Tl428688 Nitrosomonas europaea ATCC 19718 371977 Nitrosomonas europaea ATCC 19718 Tl428689 Desulfovibrio vulgaris subsp. vulgaris DP4 987543 Desulfovibrio vulgaris DP4 Tl428690 Salinibacter ruber DSM 13855 734324 Salinibacter ruber DSM 13855 Tl428691 Shewanella oneidensis MR 1 761824 Shewanella oneidensis MR-1 Tl428692 Actinosynnema mirum 5255629 Actinosynnema mirum (species silva:D85475 in Pseudonocardiales) Tl428693 Roseobacter denitrificans OCh 114 906057 Roseobacter denitrificans OCh 114 Tl428694 Escherichia coli ATCC 8739 678145 Escherichia coli ATCC 8739 Tl428695 Desulfotomaculum reducens MI 1 435505 Desulfotomaculum reducens MI-1 Tl428696 Tsukamurella paurometabola 700197 Tsukamurella paurometabola Tl428697 Jannaschia sp. CCS1 619365 Jannaschia sp. CCS1 Tl428698 Acidothermus cellulolyticus 11B 321742 Acidothermus cellulolyticus 11B Tl428699 Frankia alni ACN14a 370078 Frankia alni ACN14a Tl428700 Pseudomonas putida F1 199613 Pseudomonas putida F1 Tl428701 Streptococcus thermophilus LMD 9 175946 Streptococcus salivarius subsp. thermophilus Tl428702 Acinetobacter sp. ADP1 703641 Acinetobacter sp. ADP1 Tl428703 Escherichia coli HS 36944 Escherichia coli HS Tl428704 Vibrio cholerae O395 34696 Vibrio cholerae O395 Tl428705 Hyphomonas neptunium ATCC 15444 947995 Hyphomonas neptunium ATCC 15444 Tl428706 Photobacterium profundum SS9 267673 Photobacterium profundum SS9 Tl428707 Catenulispora acidiphila 374802 Catenulispora acidiphila Tl428708 Helicobacter pylori Shi470 417744 Helicobacter pylori Shi470 Tl428709 Bacillus cereus ATCC 14579 1024605 Bacillus cereus ATCC 14579 Tl428710 Yersinia pestis Pestoides F 412668 Yersinia pestis Pestoides F Tl428711 Bacillus anthracis str. Ames 426216 Bacillus anthracis str. Ames Tl428712 Nitrosococcus oceani ATCC 19707 147474 Nitrosococcus oceani ATCC 19707 Tl428713 Parabacteroides distasonis ATCC 8503 372002 Parabacteroides distasonis ATCC 8503 Tl428714 Roseiflexus sp. RS-1 732480 Roseiflexus sp. RS-1 Tl428715 Prochlorococcus marinus str. MIT 9215 422547 Prochlorococcus marinus str. MIT 9215 Tl428716 Leptospira biflexa serovar Patoc strain Patoc 1 Paris 250125 Leptospira biflexa serovar Patoc Tl428717 Rubrobacter xylanophilus DSM 9941 100522 Rubrobacter xylanophilus DSM 9941 Tl428718 Mycobacterium sp. KMS 173132 Mycobacterium sp. KMS Tl428719 Mycobacterium tuberculosis H37Ra 351989 Mycobacterium tuberculosis H37Ra Tl428720 Vibrio vulnificus YJ016 633601 Vibrio vulnificus YJ016 Tl428721 ot:substitutionCount Maximum likelihood tree5040_ROOT tree5040_ROOT false true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true