pythonVersion 2.7.5+ pythonImplementation CPython ^ot:dataDeposit ^ot:ottId otu359422 otu359424 otu359433 otu359435 otu359448 otu359449 otu359456 otu359457 otu359487 otu359505 otu359507 otu359525 otu359556 otu359510 otu359511 otu359557 otu359558 tree6607 Angela Oliverio 1064655 Amoebozoa pg_2484 Lahr, D.J.G., J. Grant, T. Nguyen, J.H. Lin, L.A. Katz. 2011. Comprehensive phylogenetic reconstruction of Amoebozoa based on concatenated analyses of SSU-rDNA and actin genes. PLoS ONE 6 (7): e22780. 2011 Porosia bigibbosa 514192 Porosia bigibbosa Nebela carinataHB 346718 Nebela carinata Nebela tincta 634881 Nebela tincta Nebela carinata 346718 Nebela carinata Hyalosphaenia papilio 634868 Hyalosphenia papilio Hyalosphaenia elegans 514194 Hyalosphenia elegans Apodera vas 1040710 Apodera vas Padaungiella lageniformis 1040720 Nebela lageniformis Bullinularia indica 113241 Bullinularia indica Trigonopyxis arcula 634879 Trigonopyxis arcula Centropyxis laevigata 61627 Centropyxis laevigata Arcella hemisphaerica 1073649 Arcella hemisphaerica Arcella vulgarisSC 241786 Arcella vulgaris Arcella gibbosa 708623 Arcella gibbosa Arcella vulgarisWP 241786 Arcella vulgaris Arcella discoides 1078313 Arcella discoides Arcella mitrata 1020663 Arcella mitrata Argynnia dentata 1040709 Argynnia Cryptodifflugia operculata 134336 Cryptodifflugia operculata Heleopera rosea 900936 Heleopera rosea Spumochlamys perforata 736247 Spumochlamys perforata Spumochlamys bryora 129986 Spumochlamys bryora Pyxidicula operculata 1078309 Pyxidicula operculata Heleopera sphagni 61625 Heleopera sphagni Saccamoeba sp 214880 Saccamoeba Saccamoeba lacustris 554976 Saccamoeba lacustris Glaeseria mira 273113 Glaeseria mira Copromyxa sp 580841 Hartmannella cantabrigiensis Copromyxa cantabrigiensis 580841 Hartmannella cantabrigiensis Chaos carolinense 244303 Chaos carolinense Amoeba proteus 68587 Amoeba proteus Amoeba leningradensis 244302 Amoeba leningradensis Chaos nobile 244307 Chaos nobile Saccamoeba limax 930700 Saccamoeba limax Hartmannella abertawensis 107467 Hartmannella abertawensis Nolandella sp2 384563 Nolandella Nolandella sp1 384563 Nolandella Flabelulla sp 358501 Flabellula Rhizamoeba saxonica50742 577068 Rhizamoeba saxonica Paraflabelulla hoguae 263587 Paraflabellula hoguae Rhizamoeba sp 930693 Rhizamoeba Paraflabelulla reniformis 930690 Paraflabellula reniformis Flabelulla citata 358503 Flabellula citata Leptomyxa reticulata 263578 Leptomyxa reticulata Ripidomyxa sp 705448 Ripidomyxa Rhizamoeba neglecta 915666 Rhizamoeba neglecta Echinamoeba exudans 263574 Echinamoeba exundans Echinamoeba thermarum 18159 Echinamoeba thermarum Hartmannella vermiformis 68580 Vermamoeba vermiformis Entamoeba dispar 22283 Entamoeba dispar Entamoeba histolytica 120250 Entamoeba histolytica Entamoeba equii 311733 Entamoeba equi Pelomyxa palustris 250600 Pelomyxa palustris Endolimax nana 902342 Endolimax nana Mastigasimplex 958216 Mastigamoeba simplex Mastigella commutans 958215 Mastigella commutans Mastigamoeba balamuthii 202902 Mastigamoeba balamuthi Stereomyxa ramosa 603850 Stereomyxa ramosa Parvamoeba monoura 93685 Parvamoeba Dictyostelium discoideum 160850 Dictyostelium discoideum Dictyostelium purpureum 999663 Dictyostelium purpureum Polysphondylium pallidum 591694 Polysphondylium pallidum Acytostelium ellipticum 926711 Acytostelium ellipticum Protosporangium articulatum 229626 Protosporangium articulatum Clastostelium recurvatum 268410 Clastostelium recurvatum Dermamoeba algensis 273110 Dermamoeba algensis CHINC5 Pessonella sp 384570 Pessonella Trichosphaerium sp 960883 Trichosphaerium Vexillifera minutissima 682312 Vexillifera minutissima Paramoeba eilhardi 4516 Paramoeba eilhardi Neoparamoeba branchiphila 743929 Neoparamoeba branchiphila Korotnevella hemistylolepis 577071 Korotnevella hemistylolepis Vexillifera armata 1073684 Vexillifera armata Vannella anglica 679939 Vannella anglica Vannella ebro 913734 Vannella ebro Protosteliopsis fimicola 268412 Protosteliopsis fimicola Platyamoeba placida 1086672 Platyamoeba placida Lingulamoeba leei 1073746 Lingulamoeba leei Vannella sp 679940 Vannella Clydonella sp 223097 Clydonella Vermistella antactica 644934 Vermistella antarctica Mayorella gemmifera 122101 Mayorella gemmifera Mayorella sp 113127 Mayorella Sappinia diploidea Thecamoeba ATCC50185 273115 Thecamoeba Sappinia pedata Thecamoeba similis 273114 Thecamoeba similis Thecamoeba quadrilineata 843926 Thecamoeba quadrilineata Stenamoeba stenopodia 245554 Stenamoeba Stenamoeba sp 245554 Stenamoeba Homo sapiens 770315 Homo sapiens Drosophila melanogaster 505714 Drosophila melanogaster Nematostella vectensis 938118 Nematostella vectensis Ministeria vibrans 787809 Ministeria vibrans Monosiga brevicollis 281703 Monosiga brevicollis Salpingoeca amphoridium 390569 Salpingoeca amphoridium Amoebidium parasiticum 463509 Amoebidium parasiticum Saccharomyces cerevisae 908549 Saccharomyces cerevisiae Glomus caledonium 794634 Funneliformis caledonium Nuclearia simplex 98036 Nuclearia simplex Soliformovum expulsum 1027993 Protostelium expulsum Soliformovum irregulare 1027981 Soliformovum irregulare Grellamoeba 4744084 Amoebozoa sp. 4168 Protostelium mycophagum Protostelium okumukumu 803593 Protostelium okumukumu Protostelium nocturnum 268455 Protostelium nocturnum Cavostelium apophysatum 502083 Cavostelium apophysatum Tychosporium acutostipes 854563 Tychosporium acutostipes Schizoplasmodiopsis amoeboidea 1027989 Schizoplasmodiopsis amoeboidea Flamella fluviatilis 1083187 Flamella fluviatilis Flamella aegyptia 864320 Flamella aegyptia Telaepolella tubaspherens 384565 Arachnula sp. ATCC 50593 Filamoeba nolandi 263572 Filamoeba nolandi Filamoeba sinensis 743924 Filamoeba sinensis Didymium nigripes 840784 Didymium nigripes Physapoly 422679 Physarum polycephalum Protophysarum phloiogenum 309460 Protophysarum phloiogenum Symphytocarpus impexus 309456 Symphytocarpus impexus Stemonitis flavogenita 1037476 Stemonitis flavogenita Echinostelium arboreum 277368 Echinostelium arboreum Trichia persimilis 807670 Trichia persimilis Arcyria denudata 233637 Arcyria denudata Lindbladia tubulina 808450 Lindbladia tubulina Acramoeba dendroida 617795 Acramoeba dendroida Multicilia marina 1069660 Multicilia marina Nematostelium ovatum 431666 Nematostelium ovatum Schizoplasmodium cavostelioides 431661 Schizoplasmodium cavostelioides Phalansterium solitarium 161370 Phalansterium solitarium Stygamoeba regulata 4008687 Stygamoeba regulata Protacanthamoeba bohemica 586406 Protacanthamoeba bohemica Protosteliales sp 502082 Protosteliales Acanthamoeba castellanii 120245 Acanthamoeba castellanii Balamuthia mandrilaris 739233 Balamuthia mandrillaris Gocevia fonbrunei 551744 Gocevia fonbrunei Endostelium zonatum Cochliopodium spl 492109 Cochliopodium Cochliopodium CCAP1537 492109 Cochliopodium Cochliopodium spiniferum 492105 Cochliopodium spiniferum ot:substitutionCount 50% majority-rule bootstrap consensus node924578 true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true ot:substitutionCount tree_rooted node1153122 node1153102 false true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true