{"sha": "c33806c9ee11db205ee8c02a42e31b1c3128e299", "data": {"nexml": {"@generator": "Phylografter nexml-json exporter", "@id": "study", "@nexml2json": "1.2.1", "@nexmljson": "http://purl.org/opentree/nexson", "@version": "0.9", "@xmlns": {"$": "http://www.nexml.org/2009", "nex": "http://www.nexml.org/2009", "ot": "http://purl.org/opentree-terms#", "xsd": "http://www.w3.org/2001/XMLSchema#", "xsi": "http://www.w3.org/2001/XMLSchema-instance"}, "^ot:agents": {"agent": [{"@description": "validator of NexSON constraints as well as constraints that would allow a study to be imported into the Open Tree of Life's phylogenetic synthesis tools", "@id": "peyotl-validator", "@name": "validate_ot_nexson.py", "@url": "https://github.com/OpenTreeOfLife/peyotl", "@version": "0.0.4a", "invocation": {"commandLine": ["--embed", "--agent-only"], "otherProperty": [{"name": "pythonVersion", "value": "2.7.5+"}, {"name": "pythonImplementation", "value": "CPython"}]}}]}, "^ot:annotationEvents": {"annotation": [{"@id": "peyotl-validator-event", "@description": "Open Tree NexSON validation", "@wasAssociatedWithAgentId": "peyotl-validator", "@passedChecks": true, "@preserve": false, "message": [{"@code": "MISSING_OPTIONAL_KEY", "data": ["^ot:ottId"], "refersTo": {"@top": "otus", "@idref": ["otu365956", "otu365971"], "@otusID": "otus2544", "@otuID": ["otu365956", "otu365971"]}, "@severity": "WARNING"}]}]}, "^ot:candidateTreeForSynthesis": [], "^ot:curatorName": "Chris Owen", "^ot:dataDeposit": {"@href": "http://purl.org/phylo/treebase/phylows/study/TB2:S2073"}, "^ot:focalClade": 1007159, "^ot:focalCladeOTTTaxonName": "Hexactinellida", "^ot:messages": {"message": []}, "^ot:otusElementOrder": ["otus2544"], "^ot:studyId": "pg_2544", "^ot:studyPublication": {"@href": "http://dx.doi.org/10.1080/10635150802161088"}, "^ot:studyPublicationReference": "Dohrmann, M., Janussen D., Reitner J., Collins A., & Woerheide G. 2008. Phylogeny and evolution of glass sponges (Porifera, Hexactinellida). Systematic Biology 57 (3): 388-405.", "^ot:studyYear": 2008, "^ot:tag": [], "^ot:treesElementOrder": ["trees2544"], "otusById": {"otus2544": {"otuById": {"otu365909": {"^ot:originalLabel": "Aphrocallistes", "^ot:ottId": 823198, "^ot:ottTaxonName": "Aphrocallistes", "^ot:treebaseOTUId": "Tl13056"}, "otu365910": {"^ot:originalLabel": "Rhabdopectella tintinnus", "^ot:ottId": 154395, "^ot:ottTaxonName": "Rhabdopectella tintinnus", "^ot:treebaseOTUId": "Tl215109"}, "otu365911": {"^ot:originalLabel": "Soleneiscus stolonifer", "^ot:ottId": 969051, "^ot:ottTaxonName": "Soleneiscus stolonifer", "^ot:treebaseOTUId": "Tl215110"}, "otu365912": {"^ot:originalLabel": "Iphiteon panicea", "^ot:ottId": 697346, "^ot:ottTaxonName": "Iphiteon panicea", "^ot:treebaseOTUId": "Tl215115"}, "otu365913": {"^ot:originalLabel": "Plakortis simplex", "^ot:ottId": 373945, "^ot:ottTaxonName": "Plakortis simplex", "^ot:treebaseOTUId": "Tl215117"}, "otu365914": {"^ot:originalLabel": "Montastraea franksi", "^ot:ottId": 955289, "^ot:ottTaxonName": "Montastraea franksi", "^ot:treebaseOTUId": "Tl215118"}, "otu365915": {"^ot:originalLabel": "Antipathes galapagensis", "^ot:ottId": 80609, "^ot:ottTaxonName": "Antipathes galapagensis", "^ot:treebaseOTUId": "Tl215120"}, "otu365916": {"^ot:originalLabel": "Oscarella tuberculata", "^ot:ottId": 373943, "^ot:ottTaxonName": "Oscarella tuberculata", "^ot:treebaseOTUId": "Tl215121"}, "otu365917": {"^ot:originalLabel": "Suberites ficus", "^ot:ottId": 747324, "^ot:ottTaxonName": "Suberites ficus", "^ot:treebaseOTUId": "Tl215122"}, "otu365918": {"^ot:originalLabel": "Walteria leuckarti", "^ot:ottId": 625392, "^ot:ottTaxonName": "Walteria leuckarti", "^ot:treebaseOTUId": "Tl215125"}, "otu365919": {"^ot:originalLabel": "Rossella racovitzae", "^ot:ottId": 625389, "^ot:ottTaxonName": "Rossella racovitzae", "^ot:treebaseOTUId": "Tl215126"}, "otu365920": {"^ot:originalLabel": "Atolla vanhoeffeni", "^ot:ottId": 849123, "^ot:ottTaxonName": "Atolla vanhoeffeni", "^ot:treebaseOTUId": "Tl215128"}, "otu365921": {"^ot:originalLabel": "Aulosaccus mitsukurii", "^ot:ottId": 972745, "^ot:ottTaxonName": "Aulosaccus mitsukurii", "^ot:treebaseOTUId": "Tl215130"}, "otu365922": {"^ot:originalLabel": "Aphrocallistes vastus", "^ot:ottId": 823199, "^ot:ottTaxonName": "Aphrocallistes vastus", "^ot:treebaseOTUId": "Tl215131"}, "otu365923": {"^ot:originalLabel": "Sericolophus hawaiicus", "^ot:ottId": 154398, "^ot:ottTaxonName": "Sericolophus hawaiicus", "^ot:treebaseOTUId": "Tl215132"}, "otu365924": {"^ot:originalLabel": "Acanthascus dawsoni", "^ot:ottId": 459545, "^ot:ottTaxonName": "Acanthascus dawsoni", "^ot:treebaseOTUId": "Tl215133"}, "otu365925": {"^ot:originalLabel": "Tretodictyum tubulosum", "^ot:ottId": 154396, "^ot:ottTaxonName": "Tretodictyum tubulosum", "^ot:treebaseOTUId": "Tl215134"}, "otu365926": {"^ot:originalLabel": "Clathrochone clathroclada", "^ot:ottId": 459555, "^ot:ottTaxonName": "Clathrochone clathroclada", "^ot:treebaseOTUId": "Tl215137"}, "otu365927": {"^ot:originalLabel": "Caulophacus weddelli", "^ot:ottId": 612405, "^ot:ottTaxonName": "Caulophacus weddelli", "^ot:treebaseOTUId": "Tl215140"}, "otu365928": {"^ot:originalLabel": "Hyalonema sp1", "^ot:ottId": 677703, "^ot:ottTaxonName": "Hyalonema sp. HBOI 23-VIII-93-4-001", "^ot:treebaseOTUId": "Tl215141"}, "otu365929": {"^ot:originalLabel": "Rossella nuda", "^ot:ottId": 459543, "^ot:ottTaxonName": "Rossella nuda", "^ot:treebaseOTUId": "Tl215143"}, "otu365930": {"^ot:originalLabel": "Bathydorus spinosus", "^ot:ottId": 625390, "^ot:ottTaxonName": "Bathydorus spinosus", "^ot:treebaseOTUId": "Tl215146"}, "otu365931": {"^ot:originalLabel": "Caulophacella tenuis", "^ot:ottId": 103769, "^ot:ottTaxonName": "Caulophacella tenuis", "^ot:treebaseOTUId": "Tl215147"}, "otu365932": {"^ot:originalLabel": "Malacosaccus coatsi", "^ot:ottId": 154407, "^ot:ottTaxonName": "Malacosaccus coatsi", "^ot:treebaseOTUId": "Tl215148"}, "otu365933": {"^ot:originalLabel": "Caulophacus arcticus", "^ot:ottId": 612407, "^ot:ottTaxonName": "Caulophacus arcticus", "^ot:treebaseOTUId": "Tl215157"}, "otu365934": {"^ot:originalLabel": "Acoelocalyx brucei", "^ot:ottId": 154406, "^ot:ottTaxonName": "Acoelocalyx brucei", "^ot:treebaseOTUId": "Tl215158"}, "otu365935": {"^ot:originalLabel": "Trichoplax sp", "^ot:ottId": 787234, "^ot:ottTaxonName": "Trichoplax sp. H8", "^ot:treebaseOTUId": "Tl215160"}, "otu365936": {"^ot:originalLabel": "Semperella schulzei", "^ot:ottId": 154403, "^ot:ottTaxonName": "Semperella schulzei", "^ot:treebaseOTUId": "Tl215161"}, "otu365937": {"^ot:originalLabel": "Spongilla lacustris", "^ot:ottId": 588761, "^ot:ottTaxonName": "Spongilla lacustris", "^ot:treebaseOTUId": "Tl215162"}, "otu365938": {"^ot:originalLabel": "Heterochone calyx", "^ot:ottId": 399206, "^ot:ottTaxonName": "Heterochone calyx", "^ot:treebaseOTUId": "Tl215163"}, "otu365939": {"^ot:originalLabel": "Crateromorpha meyeri", "^ot:ottId": 103767, "^ot:ottTaxonName": "Crateromorpha meyeri", "^ot:treebaseOTUId": "Tl215165"}, "otu365940": {"^ot:originalLabel": "Aplysina fistularis", "^ot:ottId": 439207, "^ot:ottTaxonName": "Aplysina fistularis", "^ot:treebaseOTUId": "Tl215169"}, "otu365941": {"^ot:originalLabel": "Plectroninia neocaledoniense", "^ot:ottId": 293075, "^ot:ottTaxonName": "Plectroninia neocaledoniense", "^ot:treebaseOTUId": "Tl215170"}, "otu365942": {"^ot:originalLabel": "Euplectella sp2", "^ot:ottId": 625393, "^ot:ottTaxonName": "Euplectella sp. HBOI 12-XI-86-1-054", "^ot:treebaseOTUId": "Tl215171"}, "otu365943": {"^ot:originalLabel": "Mycale fibrexilis", "^ot:ottId": 173161, "^ot:ottTaxonName": "Mycale fibrexilis", "^ot:treebaseOTUId": "Tl215172"}, "otu365944": {"^ot:originalLabel": "Monosiga brevicollis", "^ot:ottId": 281703, "^ot:ottTaxonName": "Monosiga brevicollis", "^ot:treebaseOTUId": "Tl215177"}, "otu365945": {"^ot:originalLabel": "Oopsacas minuta", "^ot:ottId": 351698, "^ot:ottTaxonName": "Oopsacas minuta", "^ot:treebaseOTUId": "Tl215179"}, "otu365946": {"^ot:originalLabel": "Dysidea", "^ot:ottId": 197752, "^ot:ottTaxonName": "Dysidea", "^ot:treebaseOTUId": "Tl215180"}, "otu365947": {"^ot:originalLabel": "Hexactinella carolinensis", "^ot:ottId": 154392, "^ot:ottTaxonName": "Hexactinella carolinensis", "^ot:treebaseOTUId": "Tl215181"}, "otu365948": {"^ot:originalLabel": "Heterochone sp", "^ot:ottId": 920851, "^ot:ottTaxonName": "Heterochone sp. SMF 10523", "^ot:treebaseOTUId": "Tl215185"}, "otu365949": {"^ot:originalLabel": "Euplectella sp1", "^ot:ottId": 625394, "^ot:ottTaxonName": "Euplectella sp. HBOI 19-XI-86-1-001", "^ot:treebaseOTUId": "Tl215186"}, "otu365950": {"^ot:originalLabel": "Caulophacus valdiviae", "^ot:ottId": 103768, "^ot:ottTaxonName": "Caulophacus valdiviae", "^ot:treebaseOTUId": "Tl215187"}, "otu365951": {"^ot:originalLabel": "Rossella nodastrella", "^ot:ottId": 459539, "^ot:ottTaxonName": "Nodastrella nodastrella", "^ot:treebaseOTUId": "Tl215188"}, "otu365952": {"^ot:originalLabel": "Grantiopsis sp", "^ot:ottId": 293079, "^ot:ottTaxonName": "Grantiopsis sp. G313969", "^ot:treebaseOTUId": "Tl215191"}, "otu365953": {"^ot:originalLabel": "Hydra littoralis", "^ot:ottId": 111442, "^ot:ottTaxonName": "Hydra littoralis", "^ot:treebaseOTUId": "Tl24846"}, "otu365954": {"^ot:originalLabel": "Pheronema sp.", "^ot:ottId": 920856, "^ot:ottTaxonName": "Pheronema sp. HBOI 10-VI-91-1-001", "^ot:treebaseOTUId": "Tl82343"}, "otu365955": {"^ot:originalLabel": "Lophocalyx n. sp.", "^ot:ottId": 103770, "^ot:ottTaxonName": "Lophocalyx profundum", "^ot:treebaseOTUId": "Tl82352"}, "otu365956": {"^ot:originalLabel": "Rossellinae n gen", "^ot:treebaseOTUId": "Tl82356"}, "otu365957": {"^ot:originalLabel": "Hyalonema sp2", "^ot:ottId": 677702, "^ot:ottTaxonName": "Hyalonema sp. HBOI 21-V-93-1-006", "^ot:treebaseOTUId": "Tl82360"}, "otu365958": {"^ot:originalLabel": "Leucopsacus sp.", "^ot:ottId": 625391, "^ot:ottTaxonName": "Leucopsacus sp. BX12/6", "^ot:treebaseOTUId": "Tl82361"}, "otu365959": {"^ot:originalLabel": "Farrea occa", "^ot:ottId": 887621, "^ot:ottTaxonName": "Farrea occa", "^ot:treebaseOTUId": "Tl82368"}, "otu365960": {"^ot:originalLabel": "Leucascus sp.", "^ot:ottId": 969055, "^ot:ottTaxonName": "Leucascus sp. G316051", "^ot:treebaseOTUId": "Tl82375"}, "otu365961": {"^ot:originalLabel": "Heterochone", "^ot:ottId": 399207, "^ot:ottTaxonName": "Heterochone", "^ot:treebaseOTUId": "Tl82381"}, "otu365962": {"^ot:originalLabel": "Demospongiae s str", "^ot:ottId": 67816, "^ot:ottTaxonName": "Demospongiae", "^ot:treebaseOTUId": "Tl82382"}, "otu365963": {"^ot:originalLabel": "Aulosaccus", "^ot:ottId": 103765, "^ot:ottTaxonName": "Aulosaccus", "^ot:treebaseOTUId": "Tl82383"}, "otu365964": {"^ot:originalLabel": "Oopsacas", "^ot:ottId": 879567, "^ot:ottTaxonName": "Oopsacas", "^ot:treebaseOTUId": "Tl82384"}, "otu365965": {"^ot:originalLabel": "Semperella", "^ot:ottId": 576171, "^ot:ottTaxonName": "Semperella", "^ot:treebaseOTUId": "Tl82385"}, "otu365966": {"^ot:originalLabel": "Lophocalyx", "^ot:ottId": 677699, "^ot:ottTaxonName": "Lophocalyx", "^ot:treebaseOTUId": "Tl82386"}, "otu365967": {"^ot:originalLabel": "Rhabdopectella", "^ot:ottId": 758625, "^ot:ottTaxonName": "Rhabdopectella", "^ot:treebaseOTUId": "Tl82387"}, "otu365968": {"^ot:originalLabel": "Bathydorus", "^ot:ottId": 184201, "^ot:ottTaxonName": "Bathydorus", "^ot:treebaseOTUId": "Tl82388"}, "otu365969": {"^ot:originalLabel": "Choanoflagellata", "^ot:ottId": 202765, "^ot:ottTaxonName": "Choanoflagellida", "^ot:treebaseOTUId": "Tl82389"}, "otu365970": {"^ot:originalLabel": "Crateromorpha", "^ot:ottId": 486459, "^ot:ottTaxonName": "Crateromorpha", "^ot:treebaseOTUId": "Tl82390"}, "otu365971": {"^ot:originalLabel": "Rossellinae gen nov", "^ot:treebaseOTUId": "Tl82391"}, "otu365972": {"^ot:originalLabel": "Malacosaccus", "^ot:ottId": 758623, "^ot:ottTaxonName": "Malacosaccus", "^ot:treebaseOTUId": "Tl82392"}, "otu365973": {"^ot:originalLabel": "Pheronema", "^ot:ottId": 235296, "^ot:ottTaxonName": "Pheronema", "^ot:treebaseOTUId": "Tl82393"}, "otu365974": {"^ot:originalLabel": "Calcarea", "^ot:ottId": 161887, "^ot:ottTaxonName": "Calcarea", "^ot:treebaseOTUId": "Tl82394"}, "otu365975": {"^ot:originalLabel": "Clathrochone", "^ot:ottId": 184199, "^ot:ottTaxonName": "Clathrochone", "^ot:treebaseOTUId": "Tl82395"}, "otu365976": {"^ot:originalLabel": "Iphiteon", "^ot:ottId": 697345, "^ot:ottTaxonName": "Iphiteon", "^ot:treebaseOTUId": "Tl82396"}, "otu365977": {"^ot:originalLabel": "Hyalonema", "^ot:ottId": 235297, "^ot:ottTaxonName": "Hyalonema", "^ot:treebaseOTUId": "Tl82397"}, "otu365978": {"^ot:originalLabel": "Sericolophus", "^ot:ottId": 235295, "^ot:ottTaxonName": "Sericolophus", "^ot:treebaseOTUId": "Tl82398"}, "otu365979": {"^ot:originalLabel": "Walteria", "^ot:ottId": 758627, "^ot:ottTaxonName": "Walteria", "^ot:treebaseOTUId": "Tl82399"}, "otu365980": {"^ot:originalLabel": "Euplectella", "^ot:ottId": 758626, "^ot:ottTaxonName": "Euplectella", "^ot:treebaseOTUId": "Tl82400"}, "otu365981": {"^ot:originalLabel": "Leucopsacus", "^ot:ottId": 758633, "^ot:ottTaxonName": "Leucopsacus", "^ot:treebaseOTUId": "Tl82401"}, "otu365982": {"^ot:originalLabel": "Acanthascus", "^ot:ottId": 184202, "^ot:ottTaxonName": "Acanthascus", "^ot:treebaseOTUId": "Tl82402"}, "otu365983": {"^ot:originalLabel": "Farrea", "^ot:ottId": 887624, "^ot:ottTaxonName": "Farrea", "^ot:treebaseOTUId": "Tl82403"}, "otu365984": {"^ot:originalLabel": "Rossella", "^ot:ottId": 486464, "^ot:ottTaxonName": "Rossella", "^ot:treebaseOTUId": "Tl82404"}, "otu365985": {"^ot:originalLabel": "Acoelocalyx", "^ot:ottId": 758622, "^ot:ottTaxonName": "Acoelocalyx", "^ot:treebaseOTUId": "Tl82405"}, "otu365986": {"^ot:originalLabel": "Homoscleromorpha", "^ot:ottId": 519088, "^ot:ottTaxonName": "Homoscleromorpha", "^ot:treebaseOTUId": "Tl82406"}, "otu365987": {"^ot:originalLabel": "Caulophacella", "^ot:ottId": 677696, "^ot:ottTaxonName": "Caulophacella", "^ot:treebaseOTUId": "Tl82407"}, "otu365988": {"^ot:originalLabel": "Eumetazoa", "^ot:ottId": 641038, "^ot:ottTaxonName": "Eumetazoa", "^ot:treebaseOTUId": "Tl82408"}, "otu365989": {"^ot:originalLabel": "Caulophacus", "^ot:ottId": 677697, "^ot:ottTaxonName": "Caulophacus", "^ot:treebaseOTUId": "Tl82409"}, "otu365990": {"^ot:originalLabel": "Tretodictyum", "^ot:ottId": 235293, "^ot:ottTaxonName": "Tretodictyum", "^ot:treebaseOTUId": "Tl82410"}, "otu365991": {"^ot:originalLabel": "Hexactinella", "^ot:ottId": 154397, "^ot:ottTaxonName": "Hexactinella", "^ot:treebaseOTUId": "Tl82411"}}}}, "treesById": {"trees2544": {"@otus": "otus2544", "^ot:treeElementOrder": ["tree5485", "tree5486", "tree6482"], "treeById": {"tree5485": {"@xsi:type": "nex:FloatTree", "^ot:branchLengthDescription": "", "^ot:branchLengthMode": "", "^ot:branchLengthTimeUnit": "", "^ot:curatedType": "Fig. 3a- MP", "^ot:inGroupClade": "node944598", "^ot:outGroupEdge": "", "^ot:rootNodeId": "node944595", "^ot:specifiedRoot": "", "^ot:tag": [], "edgeBySourceId": {"node944595": {"edge944596": {"@source": "node944595", "@target": "node944596"}, "edge944637": {"@source": "node944595", "@target": "node944637"}, "edge944638": {"@source": "node944595", "@target": "node944638"}}, "node944596": {"edge944597": {"@source": "node944596", "@target": "node944597"}, "edge944636": {"@source": "node944596", "@target": "node944636"}}, "node944597": {"edge944598": {"@source": "node944597", "@target": "node944598"}, "edge944634": {"@source": "node944597", "@target": "node944634"}, "edge944635": {"@source": "node944597", "@target": "node944635"}}, "node944598": {"edge944599": {"@source": "node944598", "@target": "node944599"}, "edge944605": {"@source": "node944598", "@target": "node944605"}, "edge944614": {"@source": "node944598", "@target": "node944614"}, "edge944615": {"@source": "node944598", "@target": "node944615"}, "edge944618": {"@source": "node944598", "@target": "node944618"}, "edge944621": {"@source": "node944598", "@target": "node944621"}, "edge944624": {"@source": "node944598", "@target": "node944624"}, "edge944625": {"@source": "node944598", "@target": "node944625"}, "edge944626": {"@source": "node944598", "@target": "node944626"}, "edge944627": {"@source": "node944598", "@target": "node944627"}, "edge944628": {"@source": "node944598", "@target": "node944628"}, "edge944629": {"@source": "node944598", "@target": "node944629"}, "edge944630": {"@source": "node944598", "@target": "node944630"}, "edge944631": {"@source": "node944598", "@target": "node944631"}, "edge944632": {"@source": "node944598", "@target": "node944632"}, "edge944633": {"@source": "node944598", "@target": "node944633"}}, "node944599": {"edge944600": {"@source": "node944599", "@target": "node944600"}, "edge944601": {"@source": "node944599", "@target": "node944601"}}, "node944601": {"edge944602": {"@source": "node944601", "@target": "node944602"}, "edge944603": {"@source": "node944601", "@target": "node944603"}, "edge944604": {"@source": "node944601", "@target": "node944604"}}, "node944605": {"edge944606": {"@source": "node944605", "@target": "node944606"}, "edge944613": {"@source": "node944605", "@target": "node944613"}}, "node944606": {"edge944607": {"@source": "node944606", "@target": "node944607"}, "edge944612": {"@source": "node944606", "@target": "node944612"}}, "node944607": {"edge944608": {"@source": "node944607", "@target": "node944608"}, "edge944609": {"@source": "node944607", "@target": "node944609"}, "edge944610": {"@source": "node944607", "@target": "node944610"}, "edge944611": {"@source": "node944607", "@target": "node944611"}}, "node944615": {"edge944616": {"@source": "node944615", "@target": "node944616"}, "edge944617": {"@source": "node944615", "@target": "node944617"}}, "node944618": {"edge944619": {"@source": "node944618", "@target": "node944619"}, "edge944620": {"@source": "node944618", "@target": "node944620"}}, "node944621": {"edge944622": {"@source": "node944621", "@target": "node944622"}, "edge944623": {"@source": "node944621", "@target": "node944623"}}}, "nodeById": {"node944595": {"@root": true}, "node944596": {}, "node944597": {}, "node944598": {}, "node944599": {}, "node944600": {"@otu": "otu365977"}, "node944601": {}, "node944602": {"@otu": "otu365973"}, "node944603": {"@otu": "otu365965"}, "node944604": {"@otu": "otu365978"}, "node944605": {}, "node944606": {}, "node944607": {}, "node944608": {"@otu": "otu365909"}, "node944609": {"@otu": "otu365961"}, "node944610": {"@otu": "otu365990"}, "node944611": {"@otu": "otu365991"}, "node944612": {"@otu": "otu365983"}, "node944613": {"@otu": "otu365976"}, "node944614": {"@otu": "otu365967"}, "node944615": {}, "node944616": {"@otu": "otu365979"}, "node944617": {"@otu": "otu365980"}, "node944618": {}, "node944619": {"@otu": "otu365985"}, "node944620": {"@otu": "otu365972"}, "node944621": {}, "node944622": {"@otu": "otu365984"}, "node944623": {"@otu": "otu365956"}, "node944624": {"@otu": "otu365982"}, "node944625": {"@otu": "otu365963"}, "node944626": {"@otu": "otu365968"}, "node944627": {"@otu": "otu365989"}, "node944628": {"@otu": "otu365987"}, "node944629": {"@otu": "otu365970"}, "node944630": {"@otu": "otu365966"}, "node944631": {"@otu": "otu365981"}, "node944632": {"@otu": "otu365964"}, "node944633": {"@otu": "otu365975"}, "node944634": {"@otu": "otu365962"}, "node944635": {"@otu": "otu365986"}, "node944636": {"@otu": "otu365974"}, "node944637": {"@otu": "otu365988"}, "node944638": {"@otu": "otu365969"}}}, "tree5486": {"@xsi:type": "nex:FloatTree", "^ot:branchLengthDescription": "", "^ot:branchLengthMode": "", "^ot:branchLengthTimeUnit": "", "^ot:curatedType": "Fig. 3b- MP", "^ot:inGroupClade": "node944641", "^ot:outGroupEdge": "", "^ot:rootNodeId": "node944639", "^ot:specifiedRoot": "", "^ot:tag": [], "edgeBySourceId": {"node944639": {"edge944640": {"@source": "node944639", "@target": "node944640"}, "edge944683": {"@source": "node944639", "@target": "node944683"}, "edge944684": {"@source": "node944639", "@target": "node944684"}}, "node944640": {"edge944641": {"@source": "node944640", "@target": "node944641"}, "edge944680": {"@source": "node944640", "@target": "node944680"}, "edge944681": {"@source": "node944640", "@target": "node944681"}, "edge944682": {"@source": "node944640", "@target": "node944682"}}, "node944641": {"edge944642": {"@source": "node944641", "@target": "node944642"}, "edge944643": {"@source": "node944641", "@target": "node944643"}, "edge944647": {"@source": "node944641", "@target": "node944647"}, "edge944657": {"@source": "node944641", "@target": "node944657"}, "edge944666": {"@source": "node944641", "@target": "node944666"}, "edge944667": {"@source": "node944641", "@target": "node944667"}, "edge944668": {"@source": "node944641", "@target": "node944668"}, "edge944674": {"@source": "node944641", "@target": "node944674"}, "edge944675": {"@source": "node944641", "@target": "node944675"}, "edge944676": {"@source": "node944641", "@target": "node944676"}, "edge944677": {"@source": "node944641", "@target": "node944677"}, "edge944678": {"@source": "node944641", "@target": "node944678"}, "edge944679": {"@source": "node944641", "@target": "node944679"}}, "node944643": {"edge944644": {"@source": "node944643", "@target": "node944644"}, "edge944645": {"@source": "node944643", "@target": "node944645"}, "edge944646": {"@source": "node944643", "@target": "node944646"}}, "node944647": {"edge944648": {"@source": "node944647", "@target": "node944648"}, "edge944656": {"@source": "node944647", "@target": "node944656"}}, "node944648": {"edge944649": {"@source": "node944648", "@target": "node944649"}, "edge944655": {"@source": "node944648", "@target": "node944655"}}, "node944649": {"edge944650": {"@source": "node944649", "@target": "node944650"}, "edge944653": {"@source": "node944649", "@target": "node944653"}, "edge944654": {"@source": "node944649", "@target": "node944654"}}, "node944650": {"edge944651": {"@source": "node944650", "@target": "node944651"}, "edge944652": {"@source": "node944650", "@target": "node944652"}}, "node944657": {"edge944658": {"@source": "node944657", "@target": "node944658"}, "edge944663": {"@source": "node944657", "@target": "node944663"}}, "node944658": {"edge944659": {"@source": "node944658", "@target": "node944659"}, "edge944660": {"@source": "node944658", "@target": "node944660"}}, "node944660": {"edge944661": {"@source": "node944660", "@target": "node944661"}, "edge944662": {"@source": "node944660", "@target": "node944662"}}, "node944663": {"edge944664": {"@source": "node944663", "@target": "node944664"}, "edge944665": {"@source": "node944663", "@target": "node944665"}}, "node944668": {"edge944669": {"@source": "node944668", "@target": "node944669"}, "edge944670": {"@source": "node944668", "@target": "node944670"}, "edge944673": {"@source": "node944668", "@target": "node944673"}}, "node944670": {"edge944671": {"@source": "node944670", "@target": "node944671"}, "edge944672": {"@source": "node944670", "@target": "node944672"}}}, "nodeById": {"node944639": {"@root": true}, "node944640": {}, "node944641": {}, "node944642": {"@otu": "otu365977"}, "node944643": {}, "node944644": {"@otu": "otu365973"}, "node944645": {"@otu": "otu365965"}, "node944646": {"@otu": "otu365978"}, "node944647": {}, "node944648": {}, "node944649": {}, "node944650": {}, "node944651": {"@otu": "otu365909"}, "node944652": {"@otu": "otu365961"}, "node944653": {"@otu": "otu365990"}, "node944654": {"@otu": "otu365991"}, "node944655": {"@otu": "otu365983"}, "node944656": {"@otu": "otu365976"}, "node944657": {}, "node944658": {}, "node944659": {"@otu": "otu365967"}, "node944660": {}, "node944661": {"@otu": "otu365979"}, "node944662": {"@otu": "otu365980"}, "node944663": {}, "node944664": {"@otu": "otu365985"}, "node944665": {"@otu": "otu365972"}, "node944666": {"@otu": "otu365984"}, "node944667": {"@otu": "otu365971"}, "node944668": {}, "node944669": {"@otu": "otu365982"}, "node944670": {}, "node944671": {"@otu": "otu365963"}, "node944672": {"@otu": "otu365968"}, "node944673": {"@otu": "otu365970"}, "node944674": {"@otu": "otu365989"}, "node944675": {"@otu": "otu365987"}, "node944676": {"@otu": "otu365966"}, "node944677": {"@otu": "otu365981"}, "node944678": {"@otu": "otu365964"}, "node944679": {"@otu": "otu365975"}, "node944680": {"@otu": "otu365962"}, "node944681": {"@otu": "otu365986"}, "node944682": {"@otu": "otu365974"}, "node944683": {"@otu": "otu365988"}, "node944684": {"@otu": "otu365969"}}}, "tree6482": {"@xsi:type": "nex:FloatTree", "^ot:branchLengthDescription": "", "^ot:branchLengthMode": "", "^ot:branchLengthTimeUnit": "", "^ot:curatedType": "Fig 2. BI", "^ot:inGroupClade": "node1120655", "^ot:outGroupEdge": "", "^ot:rootNodeId": "node1120650", "^ot:specifiedRoot": "", "^ot:tag": [], "edgeBySourceId": {"node1120650": {"edge1120651": {"@source": "node1120650", "@target": "node1120651"}, "edge1120750": {"@source": "node1120650", "@target": "node1120750"}}, "node1120651": {"edge1120652": {"@source": "node1120651", "@target": "node1120652"}, "edge1120741": {"@source": "node1120651", "@target": "node1120741"}}, "node1120652": {"edge1120653": {"@source": "node1120652", "@target": "node1120653"}, "edge1120730": {"@source": "node1120652", "@target": "node1120730"}}, "node1120653": {"edge1120654": {"@source": "node1120653", "@target": "node1120654"}, "edge1120727": {"@source": "node1120653", "@target": "node1120727"}}, "node1120654": {"edge1120655": {"@source": "node1120654", "@target": "node1120655"}, "edge1120722": {"@source": "node1120654", "@target": "node1120722"}}, "node1120655": {"edge1120656": {"@source": "node1120655", "@target": "node1120656"}, "edge1120713": {"@source": "node1120655", "@target": "node1120713"}}, "node1120656": {"edge1120657": {"@source": "node1120656", "@target": "node1120657"}, "edge1120702": {"@source": "node1120656", "@target": "node1120702"}}, "node1120657": {"edge1120658": {"@source": "node1120657", "@target": "node1120658"}, "edge1120689": {"@source": "node1120657", "@target": "node1120689"}}, "node1120658": {"edge1120659": {"@source": "node1120658", "@target": "node1120659"}, "edge1120684": {"@source": "node1120658", "@target": "node1120684"}}, "node1120659": {"edge1120660": {"@source": "node1120659", "@target": "node1120660"}, "edge1120675": {"@source": "node1120659", "@target": "node1120675"}}, "node1120660": {"edge1120661": {"@source": "node1120660", "@target": "node1120661"}, "edge1120674": {"@source": "node1120660", "@target": "node1120674"}}, "node1120661": {"edge1120662": {"@source": "node1120661", "@target": "node1120662"}, "edge1120669": {"@source": "node1120661", "@target": "node1120669"}}, "node1120662": {"edge1120663": {"@source": "node1120662", "@target": "node1120663"}, "edge1120668": {"@source": "node1120662", "@target": "node1120668"}}, "node1120663": {"edge1120664": {"@source": "node1120663", "@target": "node1120664"}, "edge1120667": {"@source": "node1120663", "@target": "node1120667"}}, "node1120664": {"edge1120665": {"@source": "node1120664", "@target": "node1120665"}, "edge1120666": {"@source": "node1120664", "@target": "node1120666"}}, "node1120669": {"edge1120670": {"@source": "node1120669", "@target": "node1120670"}, "edge1120673": {"@source": "node1120669", "@target": "node1120673"}}, "node1120670": {"edge1120671": {"@source": "node1120670", "@target": "node1120671"}, "edge1120672": {"@source": "node1120670", "@target": "node1120672"}}, "node1120675": {"edge1120676": {"@source": "node1120675", "@target": "node1120676"}, "edge1120681": {"@source": "node1120675", "@target": "node1120681"}}, "node1120676": {"edge1120677": {"@source": "node1120676", "@target": "node1120677"}, "edge1120680": {"@source": "node1120676", "@target": "node1120680"}}, "node1120677": {"edge1120678": {"@source": "node1120677", "@target": "node1120678"}, "edge1120679": {"@source": "node1120677", "@target": "node1120679"}}, "node1120681": {"edge1120682": {"@source": "node1120681", "@target": "node1120682"}, "edge1120683": {"@source": "node1120681", "@target": "node1120683"}}, "node1120684": {"edge1120685": {"@source": "node1120684", "@target": "node1120685"}, "edge1120688": {"@source": "node1120684", "@target": "node1120688"}}, "node1120685": {"edge1120686": {"@source": "node1120685", "@target": "node1120686"}, "edge1120687": {"@source": "node1120685", "@target": "node1120687"}}, "node1120689": {"edge1120690": {"@source": "node1120689", "@target": "node1120690"}, "edge1120701": {"@source": "node1120689", "@target": "node1120701"}}, "node1120690": {"edge1120691": {"@source": "node1120690", "@target": "node1120691"}, "edge1120700": {"@source": "node1120690", "@target": "node1120700"}}, "node1120691": {"edge1120692": {"@source": "node1120691", "@target": "node1120692"}, "edge1120697": {"@source": "node1120691", "@target": "node1120697"}}, "node1120692": {"edge1120693": {"@source": "node1120692", "@target": "node1120693"}, "edge1120696": {"@source": "node1120692", "@target": "node1120696"}}, "node1120693": {"edge1120694": {"@source": "node1120693", "@target": "node1120694"}, "edge1120695": {"@source": "node1120693", "@target": "node1120695"}}, "node1120697": {"edge1120698": {"@source": "node1120697", "@target": "node1120698"}, "edge1120699": {"@source": "node1120697", "@target": "node1120699"}}, "node1120702": {"edge1120703": {"@source": "node1120702", "@target": "node1120703"}, "edge1120710": {"@source": "node1120702", "@target": "node1120710"}}, "node1120703": {"edge1120704": {"@source": "node1120703", "@target": "node1120704"}, "edge1120709": {"@source": "node1120703", "@target": "node1120709"}}, "node1120704": {"edge1120705": {"@source": "node1120704", "@target": "node1120705"}, "edge1120708": {"@source": "node1120704", "@target": "node1120708"}}, "node1120705": {"edge1120706": {"@source": "node1120705", "@target": "node1120706"}, "edge1120707": {"@source": "node1120705", "@target": "node1120707"}}, "node1120710": {"edge1120711": {"@source": "node1120710", "@target": "node1120711"}, "edge1120712": {"@source": "node1120710", "@target": "node1120712"}}, "node1120713": {"edge1120714": {"@source": "node1120713", "@target": "node1120714"}, "edge1120719": {"@source": "node1120713", "@target": "node1120719"}}, "node1120714": {"edge1120715": {"@source": "node1120714", "@target": "node1120715"}, "edge1120718": {"@source": "node1120714", "@target": "node1120718"}}, "node1120715": {"edge1120716": {"@source": "node1120715", "@target": "node1120716"}, "edge1120717": {"@source": "node1120715", "@target": "node1120717"}}, "node1120719": {"edge1120720": {"@source": "node1120719", "@target": "node1120720"}, "edge1120721": {"@source": "node1120719", "@target": "node1120721"}}, "node1120722": {"edge1120723": {"@source": "node1120722", "@target": "node1120723"}, "edge1120726": {"@source": "node1120722", "@target": "node1120726"}}, "node1120723": {"edge1120724": {"@source": "node1120723", "@target": "node1120724"}, "edge1120725": {"@source": "node1120723", "@target": "node1120725"}}, "node1120727": {"edge1120728": {"@source": "node1120727", "@target": "node1120728"}, "edge1120729": {"@source": "node1120727", "@target": "node1120729"}}, "node1120730": {"edge1120731": {"@source": "node1120730", "@target": "node1120731"}, "edge1120738": {"@source": "node1120730", "@target": "node1120738"}}, "node1120731": {"edge1120732": {"@source": "node1120731", "@target": "node1120732"}, "edge1120735": {"@source": "node1120731", "@target": "node1120735"}}, "node1120732": {"edge1120733": {"@source": "node1120732", "@target": "node1120733"}, "edge1120734": {"@source": "node1120732", "@target": "node1120734"}}, "node1120735": {"edge1120736": {"@source": "node1120735", "@target": "node1120736"}, "edge1120737": {"@source": "node1120735", "@target": "node1120737"}}, "node1120738": {"edge1120739": {"@source": "node1120738", "@target": "node1120739"}, "edge1120740": {"@source": "node1120738", "@target": "node1120740"}}, "node1120741": {"edge1120742": {"@source": "node1120741", "@target": "node1120742"}, "edge1120749": {"@source": "node1120741", "@target": "node1120749"}}, "node1120742": {"edge1120743": {"@source": "node1120742", "@target": "node1120743"}, "edge1120746": {"@source": "node1120742", "@target": "node1120746"}}, "node1120743": {"edge1120744": {"@source": "node1120743", "@target": "node1120744"}, "edge1120745": {"@source": "node1120743", "@target": "node1120745"}}, "node1120746": {"edge1120747": {"@source": "node1120746", "@target": "node1120747"}, "edge1120748": {"@source": "node1120746", "@target": "node1120748"}}}, "nodeById": {"node1120650": {"@root": true}, "node1120651": {}, "node1120652": {}, "node1120653": {}, "node1120654": {}, "node1120655": {}, "node1120656": {}, "node1120657": {}, "node1120658": {}, "node1120659": {}, "node1120660": {}, "node1120661": {}, "node1120662": {}, "node1120663": {}, "node1120664": {}, "node1120665": {"@otu": "otu365919"}, "node1120666": {"@otu": "otu365929"}, "node1120667": {"@otu": "otu365956"}, "node1120668": {"@otu": "otu365939"}, "node1120669": {}, "node1120670": {}, "node1120671": {"@otu": "otu365921"}, "node1120672": {"@otu": "otu365951"}, "node1120673": {"@otu": "otu365924"}, "node1120674": {"@otu": "otu365930"}, "node1120675": {}, "node1120676": {}, "node1120677": {}, "node1120678": {"@otu": "otu365950"}, "node1120679": {"@otu": "otu365927"}, "node1120680": {"@otu": "otu365933"}, "node1120681": {}, "node1120682": {"@otu": "otu365931"}, "node1120683": {"@otu": "otu365955"}, "node1120684": {}, "node1120685": {}, "node1120686": {"@otu": "otu365945"}, "node1120687": {"@otu": "otu365958"}, "node1120688": {"@otu": "otu365926"}, "node1120689": {}, "node1120690": {}, "node1120691": {}, "node1120692": {}, "node1120693": {}, "node1120694": {"@otu": "otu365942"}, "node1120695": {"@otu": "otu365949"}, "node1120696": {"@otu": "otu365918"}, "node1120697": {}, "node1120698": {"@otu": "otu365934"}, "node1120699": {"@otu": "otu365932"}, "node1120700": {"@otu": "otu365910"}, "node1120701": {"@otu": "otu365912"}, "node1120702": {}, "node1120703": {}, "node1120704": {}, "node1120705": {}, "node1120706": {"@otu": "otu365938"}, "node1120707": {"@otu": "otu365948"}, "node1120708": {"@otu": "otu365922"}, "node1120709": {"@otu": "otu365959"}, "node1120710": {}, "node1120711": {"@otu": "otu365947"}, "node1120712": {"@otu": "otu365925"}, "node1120713": {}, "node1120714": {}, "node1120715": {}, "node1120716": {"@otu": "otu365954"}, "node1120717": {"@otu": "otu365923"}, "node1120718": {"@otu": "otu365936"}, "node1120719": {}, "node1120720": {"@otu": "otu365928"}, "node1120721": {"@otu": "otu365957"}, "node1120722": {}, "node1120723": {}, "node1120724": {"@otu": "otu365917"}, "node1120725": {"@otu": "otu365943"}, "node1120726": {"@otu": "otu365937"}, "node1120727": {}, "node1120728": {"@otu": "otu365940"}, "node1120729": {"@otu": "otu365946"}, "node1120730": {}, "node1120731": {}, "node1120732": {}, "node1120733": {"@otu": "otu365952"}, "node1120734": {"@otu": "otu365941"}, "node1120735": {}, "node1120736": {"@otu": "otu365911"}, "node1120737": {"@otu": "otu365960"}, "node1120738": {}, "node1120739": {"@otu": "otu365916"}, "node1120740": {"@otu": "otu365913"}, "node1120741": {}, "node1120742": {}, "node1120743": {}, "node1120744": {"@otu": "otu365953"}, "node1120745": {"@otu": "otu365920"}, "node1120746": {}, "node1120747": {"@otu": "otu365914"}, "node1120748": {"@otu": "otu365915"}, "node1120749": {"@otu": "otu365935"}, "node1120750": {"@otu": "otu365944"}}}}}}}}, "branch2sha": {"master": "c33806c9ee11db205ee8c02a42e31b1c3128e299"}, "commentHTML": "", "duplicateStudyIDs": [], "shardName": "phylesystem-1", "versionHistory": [{"id": "d33fb39501605772a074dffc82affa5344ea9a94", "author_name": "Mark T. Holder", "author_email": "mtholder@gmail.com", "date": "Wed, 11 Jun 2014 22:18:34 -0500", "date_ISO_8601": "2014-06-11 22:18:34 -0500", "relative_date": "12 years ago", "message_subject": "corrected study ids"}, {"id": "593d6fbab385716dc0a12f3fc95133e8b7479b37", "author_name": "Mark T. Holder", "author_email": "mtholder@gmail.com", "date": "Tue, 29 Apr 2014 20:05:19 -0500", "date_ISO_8601": "2014-04-29 20:05:19 -0500", "relative_date": "12 years ago", "message_subject": "initial commit with phylografter files from 29 Apr, 2014"}]}