{"sha": "c33806c9ee11db205ee8c02a42e31b1c3128e299", "data": {"nexml": {"@generator": "Phylografter nexml-json exporter", "@id": "study", "@nexml2json": "1.2.1", "@nexmljson": "http://purl.org/opentree/nexson", "@version": "0.9", "@xmlns": {"$": "http://www.nexml.org/2009", "nex": "http://www.nexml.org/2009", "ot": "http://purl.org/opentree-terms#", "xsd": "http://www.w3.org/2001/XMLSchema#", "xsi": "http://www.w3.org/2001/XMLSchema-instance"}, "^ot:agents": {"agent": [{"@description": "validator of NexSON constraints as well as constraints that would allow a study to be imported into the Open Tree of Life's phylogenetic synthesis tools", "@id": "peyotl-validator", "@name": "validate_ot_nexson.py", "@url": "https://github.com/OpenTreeOfLife/peyotl", "@version": "0.0.4a", "invocation": {"commandLine": ["--embed", "--agent-only"], "otherProperty": [{"name": "pythonVersion", "value": "2.7.5+"}, {"name": "pythonImplementation", "value": "CPython"}]}}, {"@description": "Web-based interface for submitting, editing, and reviewing studies in the Open Tree of Life project.", "@id": "opentree-curation-webapp", "@name": "OpenTree curation webapp", "@url": "https://github.com/OpenTreeOfLife/opentree", "@version": "0.0.0"}]}, "^ot:annotationEvents": {"annotation": [{"@dateCreated": "2014-07-20T17:29:52.090Z", "@description": "Aids for mapping study OTUs to OTT taxa", "@id": "otu-mapping-hints", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "OTU_MAPPING_HINTS", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"searchContext": {"$": "All life"}, "substitutions": {"substitution": [{"@active": false, "@valid": true, "new": {"$": ""}, "old": {"$": ""}}]}}, "refersTo": {"@top": {"$": "meta"}}}]}, {"@dateCreated": "2014-07-20T17:29:52.090Z", "@description": "Describes supporting data files for this study", "@id": "supporting-files-metadata", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "SUPPORTING_FILE_INFO", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"@movedToPermanentArchive": false, "files": {"file": []}}, "refersTo": {"@top": {"$": "meta"}}}]}, {"@id": "peyotl-validator-event", "@description": "Open Tree NexSON validation", "@wasAssociatedWithAgentId": "peyotl-validator", "@passedChecks": true, "@preserve": false, "message": [{"@code": "UNRECOGNIZED_KEY", "data": ["^ot:comment"], "refersTo": {"@top": "nexml", "@idref": "study"}, "@severity": "WARNING"}]}]}, "^ot:candidateTreeForSynthesis": ["tree6171"], "^ot:comment": "", "^ot:curatorName": ["bryan drew", "Jonathan A Rees"], "^ot:dataDeposit": {"@href": ""}, "^ot:focalClade": 927429, "^ot:focalCladeOTTTaxonName": "Marchantiales", "^ot:messages": {"message": []}, "^ot:notIntendedForSynthesis": false, "^ot:otusElementOrder": ["otus2648"], "^ot:studyId": "pg_2648", "^ot:studyPublication": {"@href": "http://dx.doi.org/10.1007/s00239-010-9348-9"}, "^ot:studyPublicationReference": "Volkmar, U., & Knoop, V. (2010). Introducing intron locus cox1i624 for phylogenetic analyses in bryophytes: on the issue of Takakia as sister genus to all other extant mosses. Journal of molecular evolution, 70(5), 506-518.", "^ot:studyYear": 2010, "^ot:tag": ["ingroup added;"], "^ot:treesElementOrder": ["trees2648"], "otusById": {"otus2648": {"otuById": {"otu394359": {"^ot:originalLabel": "Conocephalum conicum", "^ot:ottId": 199292, "^ot:ottTaxonName": "Conocephalum conicum"}, "otu394360": {"^ot:originalLabel": "Oxymitra incrassata", "^ot:ottId": 233158, "^ot:ottTaxonName": "Oxymitra incrassata"}, "otu394361": {"^ot:originalLabel": "Marchantia polymorpha", "^ot:ottId": 56596, "^ot:ottTaxonName": "Marchantia polymorpha"}, "otu394362": {"^ot:originalLabel": "Lunularia cruciata", "^ot:ottId": 177579, "^ot:ottTaxonName": "Lunularia cruciata"}, "otu394363": {"^ot:originalLabel": "Sphaerocarpus donnellii", "^ot:ottId": 818061, "^ot:ottTaxonName": "Sphaerocarpos donnellii"}, "otu394364": {"^ot:originalLabel": "Blasia pusilla", "^ot:ottId": 756399, "^ot:ottTaxonName": "Blasia pusilla"}, "otu394365": {"^ot:originalLabel": "Fossombronia pusilla", "^ot:ottId": 790142, "^ot:ottTaxonName": "Fossombronia pusilla"}, "otu394366": {"^ot:originalLabel": "Radula complanata", "^ot:ottId": 692281, "^ot:ottTaxonName": "Radula complanata"}, "otu394367": {"^ot:originalLabel": "Aneura pinguis", "^ot:ottId": 818064, "^ot:ottTaxonName": "Aneura pinguis"}, "otu394368": {"^ot:originalLabel": "Apotreubia nana", "^ot:ottId": 916267, "^ot:ottTaxonName": "Apotreubia nana"}, "otu394369": {"^ot:originalLabel": "Treubia lacunosa", "^ot:ottId": 54762, "^ot:ottTaxonName": "Treubia lacunosa"}, "otu394370": {"^ot:originalLabel": "Takakia lepidozioides", "^ot:ottId": 79112, "^ot:ottTaxonName": "Takakia lepidozioides"}, "otu394371": {"^ot:originalLabel": "Takakia ceratophylla", "^ot:ottId": 3228, "^ot:ottTaxonName": "Takakia ceratophylla"}, "otu394372": {"^ot:originalLabel": "Sphagnum fallax", "^ot:ottId": 108929, "^ot:ottTaxonName": "Sphagnum fallax"}, "otu394373": {"^ot:originalLabel": "Sphagnum capillifolium", "^ot:ottId": 378646, "^ot:ottTaxonName": "Sphagnum capillifolium"}, "otu394374": {"^ot:originalLabel": "Andreaea nivalis", "^ot:ottId": 403417, "^ot:ottTaxonName": "Andreaea nivalis"}, "otu394375": {"^ot:originalLabel": "Andreaeobryum macrosporum", "^ot:ottId": 777047, "^ot:ottTaxonName": "Andreaeobryum macrosporum"}, "otu394376": {"^ot:originalLabel": "Tetrodontium brownianum", "^ot:ottId": 255881, "^ot:ottTaxonName": "Tetrodontium brownianum"}, "otu394377": {"^ot:originalLabel": "Tetraphis pellucida", "^ot:ottId": 79119, "^ot:ottTaxonName": "Tetraphis pellucida"}, "otu394378": {"^ot:originalLabel": "Dawsonia spec", "^ot:ottId": 669062, "^ot:ottTaxonName": "Dawsonia"}, "otu394379": {"^ot:originalLabel": "Pogonatum urnigerum", "^ot:ottId": 905792, "^ot:ottTaxonName": "Pogonatum urnigerum"}, "otu394380": {"^ot:originalLabel": "Atrichum undulatum", "^ot:ottId": 371275, "^ot:ottTaxonName": "Atrichum undulatum"}, "otu394381": {"^ot:originalLabel": "Buxbaumia aphylla", "^ot:ottId": 988460, "^ot:ottTaxonName": "Buxbaumia aphylla"}, "otu394382": {"^ot:originalLabel": "Diphyscium sessile", "^ot:ottId": 671409, "^ot:ottTaxonName": "Diphyscium sessile"}, "otu394383": {"^ot:originalLabel": "Bartramia halleriana", "^ot:ottId": 1034277, "^ot:ottTaxonName": "Bartramia halleriana"}, "otu394384": {"^ot:originalLabel": "Mnium hornum", "^ot:ottId": 199298, "^ot:ottTaxonName": "Mnium hornum"}, "otu394385": {"^ot:originalLabel": "Hedwigia ciliata", "^ot:ottId": 981718, "^ot:ottTaxonName": "Hedwigia ciliata"}, "otu394386": {"^ot:originalLabel": "Rhacocarpus purpurascens", "^ot:ottId": 405435, "^ot:ottTaxonName": "Rhacocarpus purpurascens"}, "otu394387": {"^ot:originalLabel": "Splachnum ampullaceum", "^ot:ottId": 777051, "^ot:ottTaxonName": "Splachnum ampullaceum"}, "otu394388": {"^ot:originalLabel": "Bryobrittonia longipes", "^ot:ottId": 273694, "^ot:ottTaxonName": "Bryobrittonia longipes"}, "otu394389": {"^ot:originalLabel": "Encalypta streptocarpa", "^ot:ottId": 563120, "^ot:ottTaxonName": "Encalypta streptocarpa"}, "otu394390": {"^ot:originalLabel": "Funaria hygrometrica", "^ot:ottId": 765280, "^ot:ottTaxonName": "Funaria hygrometrica"}, "otu394391": {"^ot:originalLabel": "Physcomitrella patens", "^ot:ottId": 821359, "^ot:ottTaxonName": "Physcomitrella patens"}, "otu394392": {"^ot:originalLabel": "Timmia austriaca", "^ot:ottId": 777052, "^ot:ottTaxonName": "Timmia austriaca"}, "otu394393": {"^ot:originalLabel": "Timmia bavarica", "^ot:ottId": 148635, "^ot:ottTaxonName": "Timmia megapolitana subsp. bavarica"}, "otu394394": {"^ot:originalLabel": "Gigaspermum repens", "^ot:ottId": 1063134, "^ot:ottTaxonName": "Gigaspermum repens"}, "otu394395": {"^ot:originalLabel": "Oedipodiella australis", "^ot:ottId": 905420, "^ot:ottTaxonName": "Oedipodiella australis"}, "otu394396": {"^ot:originalLabel": "Chamaebryum pottioides", "^ot:ottId": 86147, "^ot:ottTaxonName": "Chamaebryum pottioides"}, "otu394397": {"^ot:originalLabel": "Catoscopium nigritum", "^ot:ottId": 519134, "^ot:ottTaxonName": "Catoscopium nigritum"}, "otu394398": {"^ot:originalLabel": "Timmiella spec", "^ot:ottId": 735415, "^ot:ottTaxonName": "Timmiella"}, "otu394399": {"^ot:originalLabel": "Leucobryum glaucum", "^ot:ottId": 747814, "^ot:ottTaxonName": "Leucobryum glaucum"}, "otu394400": {"^ot:originalLabel": "Fissidens cristatus", "^ot:ottId": 1034267, "^ot:ottTaxonName": "Fissidens cristatus"}, "otu394401": {"^ot:originalLabel": "Schistostega pennata", "^ot:ottId": 836471, "^ot:ottTaxonName": "Schistostega pennata"}, "otu394402": {"^ot:originalLabel": "Ditrichum cylindricum", "^ot:ottId": 445650, "^ot:ottTaxonName": "Ditrichum cylindricum"}}}}, "treesById": {"trees2648": {"@otus": "otus2648", "^ot:treeElementOrder": ["tree6171"], "treeById": {"tree6171": {"@label": "Untitled (tree6171)", "@xsi:type": "nex:FloatTree", "^ot:branchLengthDescription": "", "^ot:branchLengthMode": "ot:substitutionCount", "^ot:branchLengthTimeUnit": "", "^ot:curatedType": "ML", "^ot:inGroupClade": "node1053907", "^ot:outGroupEdge": "", "^ot:rootNodeId": "node1053907", "^ot:specifiedRoot": "node1053907", "^ot:tag": [], "^ot:unrootedTree": false, "edgeBySourceId": {"node1053907": {"edge1053908": {"@length": 0.06826649, "@source": "node1053907", "@target": "node1053908"}, "edge1053929": {"@length": 0.13653298, "@source": "node1053907", "@target": "node1053929"}}, "node1053908": {"edge1053909": {"@length": 0.02537046000000001, "@source": "node1053908", "@target": "node1053909"}, "edge1053926": {"@length": 0.06696739000000002, "@source": "node1053908", "@target": "node1053926"}}, "node1053909": {"edge1053910": {"@length": 0.012715919999999992, "@source": "node1053909", "@target": "node1053910"}, "edge1053921": {"@length": 0.03312300999999998, "@source": "node1053909", "@target": "node1053921"}}, "node1053910": {"edge1053911": {"@length": 0.01051916, "@source": "node1053910", "@target": "node1053911"}, "edge1053920": {"@length": 0.029879650000000008, "@source": "node1053910", "@target": "node1053920"}}, "node1053911": {"edge1053912": {"@length": 0.003028450000000016, "@source": "node1053911", "@target": "node1053912"}, "edge1053919": {"@length": 0.01580005000000001, "@source": "node1053911", "@target": "node1053919"}}, "node1053912": {"edge1053913": {"@length": 0.004479919999999971, "@source": "node1053912", "@target": "node1053913"}, "edge1053918": {"@length": 0.01993243, "@source": "node1053912", "@target": "node1053918"}}, "node1053913": {"edge1053914": {"@length": 0.0042034499999999975, "@source": "node1053913", "@target": "node1053914"}, "edge1053917": {"@length": 0.021796340000000025, "@source": "node1053913", "@target": "node1053917"}}, "node1053914": {"edge1053915": {"@length": 0.017331940000000018, "@source": "node1053914", "@target": "node1053915"}, "edge1053916": {"@length": 0.014952900000000019, "@source": "node1053914", "@target": "node1053916"}}, "node1053921": {"edge1053922": {"@length": 0.09288508000000001, "@source": "node1053921", "@target": "node1053922"}, "edge1053923": {"@length": 0.016519019999999995, "@source": "node1053921", "@target": "node1053923"}}, "node1053923": {"edge1053924": {"@length": 0.08810392, "@source": "node1053923", "@target": "node1053924"}, "edge1053925": {"@length": 0.10316430000000001, "@source": "node1053923", "@target": "node1053925"}}, "node1053926": {"edge1053927": {"@length": 0.041786199999999996, "@source": "node1053926", "@target": "node1053927"}, "edge1053928": {"@length": 0.019969779999999993, "@source": "node1053926", "@target": "node1053928"}}, "node1053929": {"edge1053930": {"@length": 0.010403529999999994, "@source": "node1053929", "@target": "node1053930"}, "edge1053937": {"@length": 0.013480989999999998, "@source": "node1053929", "@target": "node1053937"}}, "node1053930": {"edge1053931": {"@length": 0.06235183999999999, "@source": "node1053930", "@target": "node1053931"}, "edge1053934": {"@length": 0.08689399, "@source": "node1053930", "@target": "node1053934"}}, "node1053931": {"edge1053932": {"@length": 0.03503263000000001, "@source": "node1053931", "@target": "node1053932"}, "edge1053933": {"@length": 0.004401779999999994, "@source": "node1053931", "@target": "node1053933"}}, "node1053934": {"edge1053935": {"@length": 0.0027628700000000006, "@source": "node1053934", "@target": "node1053935"}, "edge1053936": {"@length": 0.0018857499999999916, "@source": "node1053934", "@target": "node1053936"}}, "node1053937": {"edge1053938": {"@length": 0.0039042599999999927, "@source": "node1053937", "@target": "node1053938"}, "edge1053941": {"@length": 0.016394779999999998, "@source": "node1053937", "@target": "node1053941"}}, "node1053938": {"edge1053939": {"@length": 0.03785340000000001, "@source": "node1053938", "@target": "node1053939"}, "edge1053940": {"@length": 0.032550159999999995, "@source": "node1053938", "@target": "node1053940"}}, "node1053941": {"edge1053942": {"@length": 0.004595690000000013, "@source": "node1053941", "@target": "node1053942"}, "edge1053951": {"@length": 0.00888504000000001, "@source": "node1053941", "@target": "node1053951"}}, "node1053942": {"edge1053943": {"@length": 0.012366349999999998, "@source": "node1053942", "@target": "node1053943"}, "edge1053946": {"@length": 0.03938169, "@source": "node1053942", "@target": "node1053946"}}, "node1053943": {"edge1053944": {"@length": 0.035961069999999984, "@source": "node1053943", "@target": "node1053944"}, "edge1053945": {"@length": 0.03967380000000001, "@source": "node1053943", "@target": "node1053945"}}, "node1053946": {"edge1053947": {"@length": 0.019729250000000004, "@source": "node1053946", "@target": "node1053947"}, "edge1053948": {"@length": 0.002605839999999998, "@source": "node1053946", "@target": "node1053948"}}, "node1053948": {"edge1053949": {"@length": 0.008194960000000001, "@source": "node1053948", "@target": "node1053949"}, "edge1053950": {"@length": 0.01756988000000001, "@source": "node1053948", "@target": "node1053950"}}, "node1053951": {"edge1053952": {"@length": 0.09956213000000003, "@source": "node1053951", "@target": "node1053952"}, "edge1053953": {"@length": 0.01720590999999999, "@source": "node1053951", "@target": "node1053953"}}, "node1053953": {"edge1053954": {"@length": 0.06975209999999998, "@source": "node1053953", "@target": "node1053954"}, "edge1053955": {"@length": 0.01801148999999999, "@source": "node1053953", "@target": "node1053955"}}, "node1053955": {"edge1053956": {"@length": 0.01505745, "@source": "node1053955", "@target": "node1053956"}, "edge1053965": {"@length": 0.0019293099999999896, "@source": "node1053955", "@target": "node1053965"}}, "node1053956": {"edge1053957": {"@length": 0.0016104100000000066, "@source": "node1053956", "@target": "node1053957"}, "edge1053964": {"@length": 0.03786777000000002, "@source": "node1053956", "@target": "node1053964"}}, "node1053957": {"edge1053958": {"@length": 0.001241939999999997, "@source": "node1053957", "@target": "node1053958"}, "edge1053961": {"@length": 0.009635029999999989, "@source": "node1053957", "@target": "node1053961"}}, "node1053958": {"edge1053959": {"@length": 0.01340095999999999, "@source": "node1053958", "@target": "node1053959"}, "edge1053960": {"@length": 0.026690710000000006, "@source": "node1053958", "@target": "node1053960"}}, "node1053961": {"edge1053962": {"@length": 0.012424899999999989, "@source": "node1053961", "@target": "node1053962"}, "edge1053963": {"@length": 0.005547159999999995, "@source": "node1053961", "@target": "node1053963"}}, "node1053965": {"edge1053966": {"@length": 0.0008829999999999949, "@source": "node1053965", "@target": "node1053966"}, "edge1053977": {"@length": 0.001791839999999989, "@source": "node1053965", "@target": "node1053977"}}, "node1053966": {"edge1053967": {"@length": 0.0032451199999999902, "@source": "node1053966", "@target": "node1053967"}, "edge1053974": {"@length": 0.017975569999999996, "@source": "node1053966", "@target": "node1053974"}}, "node1053967": {"edge1053968": {"@length": 0.003935250000000001, "@source": "node1053967", "@target": "node1053968"}, "edge1053971": {"@length": 0.02976292, "@source": "node1053967", "@target": "node1053971"}}, "node1053968": {"edge1053969": {"@length": 0.007419709999999996, "@source": "node1053968", "@target": "node1053969"}, "edge1053970": {"@length": 0.019208189999999986, "@source": "node1053968", "@target": "node1053970"}}, "node1053971": {"edge1053972": {"@length": 0.01627307, "@source": "node1053971", "@target": "node1053972"}, "edge1053973": {"@length": 0.009280339999999998, "@source": "node1053971", "@target": "node1053973"}}, "node1053974": {"edge1053975": {"@length": 0.005206829999999996, "@source": "node1053974", "@target": "node1053975"}, "edge1053976": {"@length": 0.00746883000000001, "@source": "node1053974", "@target": "node1053976"}}, "node1053977": {"edge1053978": {"@length": 0.014978490000000011, "@source": "node1053977", "@target": "node1053978"}, "edge1053983": {"@length": 0.005821080000000006, "@source": "node1053977", "@target": "node1053983"}}, "node1053978": {"edge1053979": {"@length": 0.029242160000000017, "@source": "node1053978", "@target": "node1053979"}, "edge1053980": {"@length": 0.009286230000000006, "@source": "node1053978", "@target": "node1053980"}}, "node1053980": {"edge1053981": {"@length": 0.0030555700000000074, "@source": "node1053980", "@target": "node1053981"}, "edge1053982": {"@length": 0.004432989999999998, "@source": "node1053980", "@target": "node1053982"}}, "node1053983": {"edge1053984": {"@length": 0.013142130000000002, "@source": "node1053983", "@target": "node1053984"}, "edge1053985": {"@length": 0.0012987700000000046, "@source": "node1053983", "@target": "node1053985"}}, "node1053985": {"edge1053986": {"@length": 0.018377859999999996, "@source": "node1053985", "@target": "node1053986"}, "edge1053987": {"@length": 0.007933930000000006, "@source": "node1053985", "@target": "node1053987"}}, "node1053987": {"edge1053988": {"@length": 0.04081870999999998, "@source": "node1053987", "@target": "node1053988"}, "edge1053989": {"@length": 0.003454600000000002, "@source": "node1053987", "@target": "node1053989"}}, "node1053989": {"edge1053990": {"@length": 0.03911352999999998, "@source": "node1053989", "@target": "node1053990"}, "edge1053991": {"@length": 0.0020657799999999893, "@source": "node1053989", "@target": "node1053991"}}, "node1053991": {"edge1053992": {"@length": 0.036528530000000003, "@source": "node1053991", "@target": "node1053992"}, "edge1053993": {"@length": 0.010458180000000011, "@source": "node1053991", "@target": "node1053993"}}}, "nodeById": {"node1053907": {"@root": true}, "node1053908": {}, "node1053909": {}, "node1053910": {}, "node1053911": {}, "node1053912": {}, "node1053913": {}, "node1053914": {}, "node1053915": {"@otu": "otu394359"}, "node1053916": {"@otu": "otu394360"}, "node1053917": {"@otu": "otu394361"}, "node1053918": {"@otu": "otu394362"}, "node1053919": {"@otu": "otu394363"}, "node1053920": {"@otu": "otu394364"}, "node1053921": {}, "node1053922": {"@otu": "otu394365"}, "node1053923": {}, "node1053924": {"@otu": "otu394366"}, "node1053925": {"@otu": "otu394367"}, "node1053926": {}, "node1053927": {"@otu": "otu394368"}, "node1053928": {"@otu": "otu394369"}, "node1053929": {}, "node1053930": {}, "node1053931": {}, "node1053932": {"@otu": "otu394370"}, "node1053933": {"@otu": "otu394371"}, "node1053934": {}, "node1053935": {"@otu": "otu394372"}, "node1053936": {"@otu": "otu394373"}, "node1053937": {}, "node1053938": {}, "node1053939": {"@otu": "otu394374"}, "node1053940": {"@otu": "otu394375"}, "node1053941": {}, "node1053942": {}, "node1053943": {}, "node1053944": {"@otu": "otu394376"}, "node1053945": {"@otu": "otu394377"}, "node1053946": {}, "node1053947": {"@otu": "otu394378"}, "node1053948": {}, "node1053949": {"@otu": "otu394379"}, "node1053950": {"@otu": "otu394380"}, "node1053951": {}, "node1053952": {"@otu": "otu394381"}, "node1053953": {}, "node1053954": {"@otu": "otu394382"}, "node1053955": {}, "node1053956": {}, "node1053957": {}, "node1053958": {}, "node1053959": {"@otu": "otu394383"}, "node1053960": {"@otu": "otu394384"}, "node1053961": {}, "node1053962": {"@otu": "otu394385"}, "node1053963": {"@otu": "otu394386"}, "node1053964": {"@otu": "otu394387"}, "node1053965": {}, "node1053966": {}, "node1053967": {}, "node1053968": {}, "node1053969": {"@otu": "otu394388"}, "node1053970": {"@otu": "otu394389"}, "node1053971": {}, "node1053972": {"@otu": "otu394390"}, "node1053973": {"@otu": "otu394391"}, "node1053974": {}, "node1053975": {"@otu": "otu394392"}, "node1053976": {"@otu": "otu394393"}, "node1053977": {}, "node1053978": {}, "node1053979": {"@otu": "otu394394"}, "node1053980": {}, "node1053981": {"@otu": "otu394395"}, "node1053982": {"@otu": "otu394396"}, "node1053983": {}, "node1053984": {"@otu": "otu394397"}, "node1053985": {}, "node1053986": {"@otu": "otu394398"}, "node1053987": {}, "node1053988": {"@otu": "otu394399"}, "node1053989": {}, "node1053990": {"@otu": "otu394400"}, "node1053991": {}, "node1053992": {"@otu": "otu394401"}, "node1053993": {"@otu": "otu394402"}}}}}}}}, "branch2sha": {"master": "c33806c9ee11db205ee8c02a42e31b1c3128e299"}, "commentHTML": "", "duplicateStudyIDs": [], "shardName": "phylesystem-1", "versionHistory": [{"id": "b02788335be0ba2f7fcbcbc63b8ee937deca950d", "author_name": "Jonathan A Rees", "author_email": "jar398@mumble.net", "date": "Sun, 20 Jul 2014 17:30:26 +0000", "date_ISO_8601": "2014-07-20 17:30:26 +0000", "relative_date": "12 years ago", "message_subject": "Looked up DOI", "message_body": "(Update Study #pg_2648 via OpenTree API)"}, {"id": "d33fb39501605772a074dffc82affa5344ea9a94", "author_name": "Mark T. Holder", "author_email": "mtholder@gmail.com", "date": "Wed, 11 Jun 2014 22:18:34 -0500", "date_ISO_8601": "2014-06-11 22:18:34 -0500", "relative_date": "12 years ago", "message_subject": "corrected study ids"}, {"id": "f8a738aeda20a73750847484e110a85c7a3e0a12", "author_name": "Mark T. Holder", "author_email": "mtholder@gmail.com", "date": "Tue, 10 Jun 2014 23:36:42 -0500", "date_ISO_8601": "2014-06-10 23:36:42 -0500", "relative_date": "12 years ago", "message_subject": "Migrating info from gcmdr to nexsons", "message_body": "using peyotl d69c8b180fce7703c7203a0b51712eab57e2988c\ndev/decorate_pg_studies_with_gcmdr_info.py\nto set:\n  ^ot:candidateTreeForSynthesis\n  ^ot:specifiedRoot, and\n  ^ot:unrootedTree\nproperties based on the use of the trees for synthesis study\nlists in gcmdr commit 35bf307e72bed4f59724762dde4a12965abcea92"}, {"id": "593d6fbab385716dc0a12f3fc95133e8b7479b37", "author_name": "Mark T. Holder", "author_email": "mtholder@gmail.com", "date": "Tue, 29 Apr 2014 20:05:19 -0500", "date_ISO_8601": "2014-04-29 20:05:19 -0500", "relative_date": "12 years ago", "message_subject": "initial commit with phylografter files from 29 Apr, 2014"}]}