--embed --agent-only pythonVersion 2.7.5+ pythonImplementation CPython Animals false ^ot:isTaxonExemplar ^ot:isTaxonExemplar ^ot:isTaxonExemplar ^ot:isTaxonExemplar ^ot:isTaxonExemplar ^ot:isTaxonExemplar otu404601 otu404630 otu404612 otu404613 otu404639 otu404640 otu404643 otu404644 otu404651 otu404655 otu404671 ^ot:comment ^ot:nodeLabelMode ^ot:nodeLabelTimeUnit ^ot:reasonsToExcludeFromSynthesis ^ot:ottId From RWThacker: This study did not yield a well resolved phylogeny. I do not think it should be used in the OTOL synthetic tree. Chris Owen bobthacker 67816 Demospongiae pg_2696 Hill, Malcolm S., April L. Hill, Jose Lopez, Kevin J. Peterson, Shirley Pomponi, Maria C. Diaz, Robert W. Thacker, Maja Adamska, Nicole Boury-Esnault, Paco Cárdenas, Andia Chaves-Fonnegra, Elizabeth Danka, Bre-Onna De Laine, Dawn Formica, Eduardo Hajdu, Gisele Lobo-Hajdu, Sarah Klontz, Christine C. Morrow, Jignasa Patel, Bernard Picton, Davide Pisani, Deborah Pohlmann, Niamh E. Redmond, John Reed, Stacy Richey, Ana Riesgo, Ewelina Rubin, Zach Russell, Klaus Rützler, Erik A. Sperling, Michael di Stefano, James E. Tarver, Allen G. Collins. 2013. Reconstruction of family-level phylogenetic relationships within Demospongiae (Porifera) using nuclear encoded housekeeping genes. PLoS ONE 8 (1): e50437. 2013 Halichsp 588763 Haliclona Halmelan 903036 Halichondria melanadocia Suberisp 127352 Suberites Clivaria 282310 Cliona varians Plainter 370261 Placospongia intermedia Spirasp 101287 Spirastrella Tetcalif 623039 Tethya californiana Tedignis 304274 Tedania ignis Claproli 2836842 Clathria prolifera Liscolom 370265 Lissodendoryx colombiensis Phoamara 950041 Phorbas Monarbu1 644857 Monanchora arbuscula Monarbu2 644857 Monanchora arbuscula Myclaevi 16787 Mycale laevis Poltenax 903040 Polymastia tenax Biecarib 328737 Biemna caribea Ageconif 298914 Agelas conifera Cymaxine 812988 Axinella corrugata Ectferox 949244 Ectyoplasia ferox Dictyosn 738878 Dictyonellidae Despumil 328726 Desmacella pumilio Geotumul 949233 Geodia gibberosa Geofibro 375220 Stelletta fibrosa Chaaffco 328740 Characella aff. connectens SB-2012 Cinapion 351825 Cinachyrella apion Derluteu 575963 Dercitus luteus Microssn 4116453 Microscleroderma Halmangl 270972 Haliclona manglaris Haliclsp 119450 Halichondria HalHalsp 588763 Haliclona Petficif 389380 Petrosia ficiformis Calvagin 305417 Callyspongia vaginalis Ampqueen 707499 Amphimedon queenslandica Xesmuta 880230 Xestospongia muta Akacoral 981302 Aka coralliphaga Ampcompr 981298 Amphimedon compressa Tropenns 166656 Trochospongilla pennsylvanica Ephcoope 388857 Ephydatia fluviatilis Ircstro1 1059122 Ircinia strobilina Ircstro2 1059122 Ircinia strobilina Hyrprote 114792 Hyrtios proteus Hiplachn 502630 Hippospongia lachne Igenota1 928151 Igernella notabilis Igenota2 928151 Igernella notabilis Dysether 828977 Dysidea etheria Aplfistu 439207 Aplysina fistularis Aplfulva 730432 Aplysina fulva Verrigid 314621 Verongula rigida Aiocrass 595809 Aiolochroia crassa Halisasp 140390 Halisarca Chocarib Syclingu 689778 Sycon lingua Syccilia 684951 Sycon ciliatum Syccoact 712232 Sycon coactum Leucossp Leucompl 662065 Leucosolenia complicata Leunutti 8700 Leucilla nuttingi Leuchago 918964 Leucetta chagosensis Clacereb 606954 Borojevia cerebrum Rosnodas 966145 Nodastrella asconemaoida Bathydsp 184201 Bathydorus Acadawso 459545 Acanthascus dawsoni Herfalci 903034 Hertwigia falcifera Aphvastu 823199 Aphrocallistes vastus Hetcalyx 399206 Heterochone calyx Corcande 266093 Corticium candelabrum Plaangul 248925 Plakortis angulospiculatus Osccarme 862117 Oscarella carmela Nematost 938118 Nematostella vectensis Metridi 558017 Metridium senile Acropora Trichop 570365 Trichoplax adhaerens ot:substitutionCount Fig. 1 ML node1083470 This tree is poorly resolved compared to the 18S and 28S trees from PorToL, which contain the same taxa. rooted; true true true true true true true true true true true true true true true false true true true true true true true true true true true true true true true true true true true true true true true true true true true true false true true true true true false true true true true true true true true true true true true true true true true true true true true true true true true true true true true