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CPython
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^ot:isTaxonExemplar
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otu404601
otu404630
otu404612
otu404613
otu404639
otu404640
otu404643
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From RWThacker: This study did not yield a well resolved phylogeny. I do not think it should be used in the OTOL synthetic tree.
Chris Owen
bobthacker
67816
Demospongiae
pg_2696
Hill, Malcolm S., April L. Hill, Jose Lopez, Kevin J. Peterson, Shirley Pomponi, Maria C. Diaz, Robert W. Thacker, Maja Adamska, Nicole Boury-Esnault, Paco Cárdenas, Andia Chaves-Fonnegra, Elizabeth Danka, Bre-Onna De Laine, Dawn Formica, Eduardo Hajdu, Gisele Lobo-Hajdu, Sarah Klontz, Christine C. Morrow, Jignasa Patel, Bernard Picton, Davide Pisani, Deborah Pohlmann, Niamh E. Redmond, John Reed, Stacy Richey, Ana Riesgo, Ewelina Rubin, Zach Russell, Klaus Rützler, Erik A. Sperling, Michael di Stefano, James E. Tarver, Allen G. Collins. 2013. Reconstruction of family-level phylogenetic relationships within Demospongiae (Porifera) using nuclear encoded housekeeping genes. PLoS ONE 8 (1): e50437.
2013
Halichsp
588763
Haliclona
Halmelan
903036
Halichondria melanadocia
Suberisp
127352
Suberites
Clivaria
282310
Cliona varians
Plainter
370261
Placospongia intermedia
Spirasp
101287
Spirastrella
Tetcalif
623039
Tethya californiana
Tedignis
304274
Tedania ignis
Claproli
2836842
Clathria prolifera
Liscolom
370265
Lissodendoryx colombiensis
Phoamara
950041
Phorbas
Monarbu1
644857
Monanchora arbuscula
Monarbu2
644857
Monanchora arbuscula
Myclaevi
16787
Mycale laevis
Poltenax
903040
Polymastia tenax
Biecarib
328737
Biemna caribea
Ageconif
298914
Agelas conifera
Cymaxine
812988
Axinella corrugata
Ectferox
949244
Ectyoplasia ferox
Dictyosn
738878
Dictyonellidae
Despumil
328726
Desmacella pumilio
Geotumul
949233
Geodia gibberosa
Geofibro
375220
Stelletta fibrosa
Chaaffco
328740
Characella aff. connectens SB-2012
Cinapion
351825
Cinachyrella apion
Derluteu
575963
Dercitus luteus
Microssn
4116453
Microscleroderma
Halmangl
270972
Haliclona manglaris
Haliclsp
119450
Halichondria
HalHalsp
588763
Haliclona
Petficif
389380
Petrosia ficiformis
Calvagin
305417
Callyspongia vaginalis
Ampqueen
707499
Amphimedon queenslandica
Xesmuta
880230
Xestospongia muta
Akacoral
981302
Aka coralliphaga
Ampcompr
981298
Amphimedon compressa
Tropenns
166656
Trochospongilla pennsylvanica
Ephcoope
388857
Ephydatia fluviatilis
Ircstro1
1059122
Ircinia strobilina
Ircstro2
1059122
Ircinia strobilina
Hyrprote
114792
Hyrtios proteus
Hiplachn
502630
Hippospongia lachne
Igenota1
928151
Igernella notabilis
Igenota2
928151
Igernella notabilis
Dysether
828977
Dysidea etheria
Aplfistu
439207
Aplysina fistularis
Aplfulva
730432
Aplysina fulva
Verrigid
314621
Verongula rigida
Aiocrass
595809
Aiolochroia crassa
Halisasp
140390
Halisarca
Chocarib
Syclingu
689778
Sycon lingua
Syccilia
684951
Sycon ciliatum
Syccoact
712232
Sycon coactum
Leucossp
Leucompl
662065
Leucosolenia complicata
Leunutti
8700
Leucilla nuttingi
Leuchago
918964
Leucetta chagosensis
Clacereb
606954
Borojevia cerebrum
Rosnodas
966145
Nodastrella asconemaoida
Bathydsp
184201
Bathydorus
Acadawso
459545
Acanthascus dawsoni
Herfalci
903034
Hertwigia falcifera
Aphvastu
823199
Aphrocallistes vastus
Hetcalyx
399206
Heterochone calyx
Corcande
266093
Corticium candelabrum
Plaangul
248925
Plakortis angulospiculatus
Osccarme
862117
Oscarella carmela
Nematost
938118
Nematostella vectensis
Metridi
558017
Metridium senile
Acropora
Trichop
570365
Trichoplax adhaerens
ot:substitutionCount
Fig. 1 ML
node1083470
This tree is poorly resolved compared to the 18S and 28S trees from PorToL, which contain the same taxa.
rooted;
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