--embed --agent-only pythonVersion 2.7.5+ pythonImplementation CPython All life ^ot:comment ^ot:ottId otu410750 otu410932 otu411042 otu411102 tree6369 Dail Laughinghouse Jonathan A Rees 248067 Proteobacteria false pg_2757 Sachs J.L., Skophammer R.G., Bansal N., & Stajich J.E. 2013. Evolutionary origins and diversification of proteobacterial mutualists. Proceedings of the Royal Society B: Biological Sciences, . 2013 Enterobacter sp. 638 599955 Enterobacter sp. 638 Tl1274103 Parvibaculum lavamentivorans DS 1 927547 Parvibaculum lavamentivorans DS-1 Tl1274104 Arcobacter nitrofigilis DSM 7299 162871 Arcobacter nitrofigilis DSM 7299 Tl1274105 Syntrophus aciditrophicus SB 140429 Syntrophus aciditrophicus SB Tl1274106 Nitratiruptor sp. SB155-2 4775403 Nitratiruptor sp. SB155-2 Tl1274107 Yersinia pestis Angola 735114 Yersinia pestis Angola Tl1274108 Myxococcus xanthus DK 1622 351447 Myxococcus xanthus DK 1622 Tl1274109 Nitrosococcus halophilus Nc4 64875 Nitrosococcus halophilus Nc 4 Tl1274110 Campylobacter hominis ATCC BAA 381 612677 Campylobacter hominis Tl1274111 Caldicellulosiruptor saccharolyticus DSM 8903 371049 Caldicellulosiruptor saccharolyticus DSM 8903 Tl1274112 Orientia tsutsugamushi Str Boryong 311552 Orientia tsutsugamushi str. Boryong Tl1274113 Burkholderia vietnamiensis G4 617096 Burkholderia vietnamiensis G4 Tl1274114 Shigella boydii Sb227 1091291 Shigella boydii Sb227 Tl1274115 Methylococcus capsulatus str. Bath 103406 Methylococcus capsulatus str. Bath Tl1274116 Escherichia coli HS 36944 Escherichia coli HS Tl1274117 Rickettsia felis URRWXCal2 25300 Rickettsia felis URRWXCal2 Tl1274118 Pseudomonas stutzeri A1501 544793 Pseudomonas stutzeri A1501 Tl1274119 Citrobacter rodentium ICC168 216991 Citrobacter rodentium ICC168 Tl1274120 Aggregatibacter aphrophilus NJ8700 778290 Aggregatibacter aphrophilus NJ8700 Tl1274121 Pseudomonas fluorescens Pf0 1 607803 Pseudomonas fluorescens Pf0-1 Tl1274122 Psychrobacter arcticus 273 4 988603 Psychrobacter arcticus 273-4 Tl1274123 Phenylobacterium zucineum HLK1 1061613 Phenylobacterium zucineum HLK1 Tl1274124 Geobacter sp. FRC 32 55524 Geobacter daltonii FRC-32 Tl1274125 Thiobacillus denitrificans ATCC 25259 744188 Thiobacillus denitrificans ATCC 25259 Tl1274126 Acetobacter pasteurianus IFO 3283 01 610661 Acetobacter pasteurianus IFO 3283-01 Tl1274127 Dickeya dadantii Ech703 197999 Dickeya dadantii Ech703 Tl1274128 Herminiimonas arsenicoxydans 514905 Herminiimonas arsenicoxydans Tl1274129 Candidatus Blochmannia floridanus Tl1274130 Nautilia profundicola AmH 842152 Nautilia profundicola AmH Tl1274131 Agrobacterium tumefaciens str. C58 601809 Agrobacterium fabrum str. C58 Tl1274132 Escherichia coli IHE3034 849019 Escherichia coli IHE3034 Tl1274133 Rhizobium leguminosarum bv. trifolii WSM1325 WSM1325 43996 Rhizobium leguminosarum bv. trifolii Tl1274134 Methylovorus sp. SIP3-4 870371 Methylovorus glucosetrophus SIP3-4 Tl1274135 Candidatus Puniceispirillum marinum str. IMCC1322 4778204 Candidatus Puniceispirillum marinum IMCC1322 Tl1274136 Hirschia baltica ATCC 49814 747518 Hirschia baltica ATCC 49814 Tl1274137 Acinetobacter oleivorans DR1 148025 Acinetobacter oleivorans DR1 Tl1274138 Burkholderia cenocepacia HI2424 203605 Burkholderia cenocepacia HI2424 Tl1274139 Rickettsia conorii str. Malish 7 92209 Rickettsia conorii str. Malish 7 Tl1274140 Cupriavidus taiwanensis 863452 Cupriavidus taiwanensis Tl1274141 Bordetella bronchiseptica RB50 133236 Bordetella bronchiseptica RB50 Tl1274142 Saccharophagus degradans 2 40 340495 Saccharophagus degradans 2-40 Tl1274143 Rickettsia akari str. Hartford 69973 Rickettsia akari str. Hartford Tl1274144 Frankia alni ACN14a 370078 Frankia alni ACN14a Tl1274145 Pectobacterium carotovorum subsp. carotovorum PC1 576016 Pectobacterium carotovorum subsp. carotovorum Tl1274146 Bradyrhizobium japonicum USDA 110 953841 Bradyrhizobium diazoefficiens USDA 110 Tl1274147 Burkholderia phymatum STM815 915183 Burkholderia phymatum STM815 Tl1274148 Escherichia coli O26 H11 str 11368 396673 Escherichia coli O26:H11 str. 11368 Tl1274149 Dichelobacter nodosus VCS1703A 351439 Dichelobacter nodosus VCS1703A Tl1274150 Neisseria meningitidis FAM18 252031 Neisseria meningitidis FAM18 Tl1274151 Shigella sonnei Ss046 1091288 Shigella sonnei Ss046 Tl1274152 Oligotropha carboxidovorans OM5 711143 Oligotropha carboxidovorans OM5 Tl1274153 Agrobacterium radiobacter K84 486544 Agrobacterium radiobacter K84 Tl1274154 Vibrio parahaemolyticus RIMD 2210633 383129 Vibrio parahaemolyticus RIMD 2210633 Tl1274155 Marinobacter aquaeolei VT8 242084 Marinobacter aquaeolei VT8 Tl1274156 Ehrlichia ruminantium str. Gardel 787391 Ehrlichia ruminantium str. Gardel Tl1274157 Burkholderia thailandensis E264 90658 Burkholderia thailandensis E264 Tl1274158 Desulfobacterium autotrophicum HRM2 10786 Desulfobacterium autotrophicum HRM2 Tl1274159 Actinobacillus succinogenes 130Z 979197 Actinobacillus succinogenes 130Z Tl1274160 Shewanella violacea DSS12 41564 Shewanella violacea DSS12 Tl1274161 Yersinia enterocolitica subsp. enterocolitica 8081 1057543 Yersinia enterocolitica subsp. enterocolitica 8081 Tl1274162 Methylobacterium chloromethanicum CM4 950700 Methylobacterium extorquens CM4 Tl1274163 Haemophilus influenzae 86 028NP 22009 Haemophilus influenzae 86-028NP Tl1274164 Cronobacter sakazakii ATCC BAA 894 97517 Cronobacter sakazakii ATCC BAA-894 Tl1274165 Escherichia coli O127 H6 str E2348 69 285621 Escherichia coli O127:H6 str. E2348/69 Tl1274166 Beijerinckia indica subsp. indica ATCC 9039 626622 Beijerinckia indica subsp. indica ATCC 9039 Tl1274167 Sulfurimonas denitrificans str. DSM 1251 569599 Sulfurimonas denitrificans DSM 1251 Tl1274168 Actinobacillus pleuropneumoniae L20 738287 Actinobacillus pleuropneumoniae serovar 5b str. L20 Tl1274169 Candidatus Desulfococcus oleovorans Hxd3 638036 Desulfococcus oleovorans Hxd3 Tl1274170 Porphyromonas gingivalis W83 919049 Porphyromonas gingivalis W83 Tl1274171 Pseudomonas entomophila L48 111573 Pseudomonas entomophila L48 Tl1274172 Escherichia coli SE15 305989 Escherichia coli SE15 Tl1274173 Vibrio splendidus LGP32 479294 Vibrio splendidus LGP32 Tl1274174 Pelobacter carbinolicus DSM 2380 741363 Pelobacter carbinolicus DSM 2380 Tl1274175 Escherichia coli ATCC 8739 678145 Escherichia coli ATCC 8739 Tl1274176 Herbaspirillum seropedicae SmR1 453054 Herbaspirillum seropedicae SmR1 Tl1274177 Erwinia amylovora ATCC 49946 1098836 Erwinia amylovora ATCC 49946 Tl1274178 Bartonella grahamii as4aup 709644 Bartonella grahamii as4aup Tl1274179 Yersinia pestis Pestoides F 412668 Yersinia pestis Pestoides F Tl1274180 Yersinia pestis Z176003 583241 Yersinia pestis Z176003 Tl1274181 Anaeromyxobacter sp. Fw109-5 60668 Anaeromyxobacter sp. Fw109-5 Tl1274182 Bordetella petrii DSM 12804 979013 Bordetella petrii DSM 12804 Tl1274183 Shewanella frigidimarina NCIMB 400 973887 Shewanella frigidimarina NCIMB 400 Tl1274184 Brucella suis 1330 692274 Brucella suis 1330 Tl1274185 Candidatus Liberibacter asiaticus str. psy62 694067 Candidatus Liberibacter asiaticus str. psy62 Tl1274186 Bradyrhizobium sp. BTAi1 185184 Bradyrhizobium sp. BTAi1 Tl1274187 Nitrosomonas europaea ATCC 19718 371977 Nitrosomonas europaea ATCC 19718 Tl1274188 Nitrosococcus oceani ATCC 19707 147474 Nitrosococcus oceani ATCC 19707 Tl1274189 Methylobacterium extorquens AM1 795262 Methylobacterium extorquens AM1 Tl1274190 Opitutus terrae PB90 1 604141 Opitutus terrae PB90-1 Tl1274191 Sphingopyxis alaskensis RB2256 220183 Sphingopyxis alaskensis RB2256 Tl1274192 Alteromonas macleodii Deep ecotype 536970 Alteromonas macleodii str. 'Deep ecotype' Tl1274193 Thiomicrospira crunogena XCL 2 89144 Thiomicrospira crunogena XCL-2 Tl1274194 Rhodobacter capsulatus SB 1003 92200 Rhodobacter capsulatus SB 1003 Tl1274195 Desulfurivibrio alkaliphilus AHT2 1058043 Desulfurivibrio alkaliphilus AHT2 Tl1274196 Candidatus Hamiltonella defensa str. 5AT (Acyrthosiphon pisum) 5175427 Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) Tl1274197 Xanthomonas campestris pv. campestris str. B100 831879 Xanthomonas campestris pv. campestris str. B100 Tl1274198 Legionella longbeachae NSW150 739739 Legionella longbeachae NSW150 Tl1274199 Ralstonia eutropha H16 875674 Ralstonia eutropha H16 Tl1274200 Desulfovibrio vulgaris DP4 987543 Desulfovibrio vulgaris DP4 Tl1274201 Ralstonia solanacearum GMI1000 1024939 Ralstonia solanacearum GMI1000 Tl1274202 Chromobacterium violaceum ATCC 12472 602877 Chromobacterium violaceum ATCC 12472 Tl1274203 Cronobacter turicensis z3032 13317 Cronobacter turicensis z3032 Tl1274204 Desulfovibrio salexigens DSM 2638 303857 Desulfovibrio salexigens DSM 2638 Tl1274205 Escherichia coli O157 H7 str EC4115 72422 Escherichia coli O157:H7 str. EC4115 Tl1274206 Bartonella bacilliformis KC583 257687 Bartonella bacilliformis KC583 Tl1274207 Rhodospirillum centenum SW 460533 Rhodospirillum centenum SW Tl1274208 Xanthomonas oryzae pv oryzae KACC10331 540065 Xanthomonas oryzae pv. oryzae KACC 10331 Tl1274209 Sodalis glossinidius str. morsitans 218480 Sodalis glossinidius str. 'morsitans' Tl1274210 Sorangium cellulosum str. So ce56 275853 Sorangium cellulosum So ce56 Tl1274211 Burkholderia phytofirmans PsJN 582114 Burkholderia phytofirmans PsJN Tl1274212 Escherichia coli str. IAI1 107649 Escherichia coli IAI1 Tl1274213 Rickettsia typhi str. Wilmington 602657 Rickettsia typhi str. Wilmington Tl1274214 Verminephrobacter eiseniae EF01 2 885550 Verminephrobacter eiseniae EF01-2 Tl1274215 Candidatus Accumulibacter phosphatis clade IIA str. UW 1 4777084 Candidatus Accumulibacter phosphatis clade IIA str. UW-1 Tl1274216 Yersinia pestis D106004 583231 Yersinia pestis D106004 Tl1274217 Azoarcus sp. BH72 231148 Azoarcus sp. BH72 Tl1274218 Methylobacterium populi BJ001 864840 Methylobacterium populi BJ001 Tl1274219 Campylobacter lari RM2100 45688 Campylobacter lari RM2100 Tl1274220 Acinetobacter baumannii AB0057 951143 Acinetobacter baumannii AB0057 Tl1274221 Shewanella sp. MR-7 915503 Shewanella sp. MR-7 Tl1274222 Shewanella piezotolerans WP3 722465 Shewanella piezotolerans WP3 Tl1274223 Shewanella baltica OS155 476163 Shewanella baltica OS155 Tl1274224 Polaromonas sp. JS666 562974 Polaromonas sp. JS666 Tl1274225 Brucella canis ATCC 23365 676151 Brucella canis ATCC 23365 Tl1274226 Escherichia coli 55989 56093 Escherichia coli 55989 Tl1274227 Burkholderia mallei NCTC 10247 501307 Burkholderia mallei NCTC 10247 Tl1274228 Rhizobium sp. NGR234 616946 Sinorhizobium fredii NGR234 Tl1274229 Pseudomonas mendocina ymp 289875 Pseudomonas mendocina ymp Tl1274230 Anaplasma marginale str. St. Maries 97618 Anaplasma marginale str. St. Maries Tl1274231 Pseudomonas syringae pv. syringae B728a 86431 Pseudomonas syringae pv. syringae B728a Tl1274232 Synechocystis sp. PCC 6803 5256113 Synechocystis sp. PCC 6803 Tl1274233 Anaplasma centrale str. Israel 818815 Anaplasma centrale str. Israel Tl1274234 Burkholderia cenocepacia MC0 3 290934 Burkholderia cenocepacia MC0-3 Tl1274235 Halorhodospira halophila SL1 535975 Halorhodospira halophila SL1 Tl1274236 Hyphomicrobium denitrificans ATCC 51888 5170443 Hyphomicrobium denitrificans ATCC 51888 Tl1274237 Rhodoferax ferrireducens T118 741379 Rhodoferax ferrireducens T118 Tl1274238 Bordetella parapertussis 12822 133237 Bordetella parapertussis 12822 Tl1274239 Geobacter lovleyi SZ 625623 Geobacter lovleyi SZ Tl1274240 Escherichia coli BW2952 401864 Escherichia coli BW2952 Tl1274241 Shewanella pealeana ATCC 700345 163791 Shewanella pealeana ATCC 700345 Tl1274242 Janthinobacterium sp. Marseille 675631 Janthinobacterium sp. Marseille Tl1274243 Escherichia coli SMS 3 5 992225 Escherichia coli SMS-3-5 Tl1274244 Enterobacter cloacae subsp. cloacae ATCC 13047 184530 Enterobacter cloacae subsp. cloacae ATCC 13047 Tl1274245 Salmonella enterica subsp. enterica serovar Agona str. SL483 928550 Salmonella enterica subsp. enterica serovar Agona str. SL483 Tl1274246 Sulfurovum sp. NBC37-1 4775312 Sulfurovum sp. NBC37-1 Tl1274247 Acidovorax sp. JS42 893430 Acidovorax sp. JS42 Tl1274248 Geobacter uraniumreducens Rf4 321746 Geobacter uraniireducens Rf4 Tl1274249 Pseudomonas fluorescens SBW25 256363 Pseudomonas fluorescens SBW25 Tl1274250 Sphingobium japonicum UT26S 360300 Sphingobium japonicum UT26S Tl1274251 Pelobacter propionicus DSM 2379 741372 Pelobacter propionicus DSM 2379 Tl1274252 Acidovorax avenae subsp. citrulli AAC00-1 213797 Acidovorax citrulli AAC00-1 Tl1274253 Aeromonas salmonicida subsp. salmonicida A449 541765 Aeromonas salmonicida subsp. salmonicida A449 Tl1274254 Mycobacterium tuberculosis H37Rv 232551 Mycobacterium tuberculosis H37Rv Tl1274255 Sinorhizobium medicae WSM419 679430 Sinorhizobium medicae WSM419 Tl1274256 Teredinibacter turnerae T7901 894985 Teredinibacter turnerae T7901 Tl1274257 Francisella tularensis subsp. mediasiatica FSC147 834782 Francisella tularensis subsp. mediasiatica FSC147 Tl1274258 Anaeromyxobacter sp. K 119914 Anaeromyxobacter sp. K Tl1274259 Neisseria gonorrhoeae FA 1090 770027 Neisseria gonorrhoeae FA 1090 Tl1274260 Pseudoalteromonas haloplanktis TAC125 219433 Pseudoalteromonas haloplanktis TAC125 Tl1274261 Jannaschia sp. CCS1 619365 Jannaschia sp. CCS1 Tl1274262 Syntrophobacter fumaroxidans MPOB 563271 Syntrophobacter fumaroxidans MPOB Tl1274263 Haemophilus somnus 129PT 86437 Haemophilus somnus 129PT Tl1274264 Bacillus clausii KSM K16 337359 Bacillus clausii KSM-K16 Tl1274265 Methylibium petroleiphilum PM1 4775635 Methylibium petroleiphilum PM1 Tl1274266 Pectobacterium wasabiae WPP163 523082 Pectobacterium wasabiae WPP163 Tl1274267 Moraxella catarrhalis RH4 1034855 Moraxella catarrhalis RH4 Tl1274268 Erwinia tasmaniensis Et1 99 362721 Erwinia tasmaniensis Et1/99 Tl1274269 Haliangium ochraceum DSM 14365 353044 Haliangium ochraceum DSM 14365 Tl1274270 Xanthomonas axonopodis pv. citri str. 306 427731 Xanthomonas axonopodis pv. citri str. 306 Tl1274271 Shewanella woodyi ATCC 51908 794093 Shewanella woodyi ATCC 51908 Tl1274272 Azospirillum sp. B510 490355 Azospirillum sp. B510 Tl1274273 Dinoroseobacter shibae DFL 12 880918 Dinoroseobacter shibae DFL 12 Tl1274274 Shewanella halifaxensis HAW EB4 368716 Shewanella halifaxensis HAW-EB4 Tl1274275 Colwellia psychrerythraea 34H 462302 Colwellia psychrerythraea 34H Tl1274276 Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 466524 Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 Tl1274277 Escherichia fergusonii ATCC 35469 56094 Escherichia fergusonii ATCC 35469 Tl1274278 Bordetella avium 197N 273958 Bordetella avium 197N Tl1274279 Hahella chejuensis KCTC 2396 622304 Hahella chejuensis KCTC 2396 Tl1274280 Brucella ovis ATCC 25840 480703 Brucella ovis ATCC 25840 Tl1274281 Leptothrix cholodnii SP 6 4775686 Leptothrix cholodnii SP-6 Tl1274282 Escherichia coli UMN026 56098 Escherichia coli UMN026 Tl1274283 Candidatus Riesia pediculicola USDA 793411 Candidatus Riesia pediculicola USDA Tl1274284 Rhodopseudomonas palustris HaA2 480177 Rhodopseudomonas palustris HaA2 Tl1274285 Chelativorans sp. BNC1 295509 Chelativorans sp. BNC1 Tl1274286 Escherichia coli 042 256358 Escherichia coli 042 Tl1274287 Dickeya zeae Ech1591 1442 Dickeya zeae Ech1591 Tl1274288 Bdellovibrio bacteriovorus HD100 703708 Bdellovibrio bacteriovorus HD100 Tl1274289 Nitrosomonas eutropha C91 646047 Nitrosomonas eutropha C91 Tl1274290 Xanthobacter autotrophicus Py2 595958 Xanthobacter autotrophicus Py2 Tl1274291 Coxiella burnetii RSA 331 386467 Coxiella burnetii RSA 331 Tl1274292 Delftia acidovorans SPH 1 163788 Delftia acidovorans SPH-1 Tl1274293 Burkholderia multivorans ATCC 17616 60937 Burkholderia multivorans ATCC 17616 Tl1274294 Campylobacter curvus 52592 962616 Campylobacter curvus 525.92 Tl1274295 Polaromonas naphthalenivorans CJ2 612655 Polaromonas naphthalenivorans CJ2 Tl1274296 Serratia proteamaculans 568 1030764 Serratia proteamaculans 568 Tl1274297 Klebsiella pneumoniae NTUH K2044 219533 Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 Tl1274298 Magnetospirillum magneticum AMB 1 476728 Magnetospirillum magneticum AMB-1 Tl1274299 Helicobacter pylori 26695 133763 Helicobacter pylori 26695 Tl1274300 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 595767 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Tl1274301 Anaeromyxobacter dehalogenans 2CP 1 179323 Anaeromyxobacter dehalogenans Tl1274302 Shigella flexneri 2a str 2457T 586765 Shigella flexneri 2a str. 2457T Tl1274303 Ehrlichia canis str. Jake 617101 Ehrlichia canis str. Jake Tl1274304 Helicobacter hepaticus ATCC 51449 618777 Helicobacter hepaticus ATCC 51449 Tl1274305 Xenorhabdus bovienii SS 2004 62489 Xenorhabdus bovienii SS-2004 Tl1274306 Candidatus Pelagibacter ubique HTCC1062 4778187 Candidatus Pelagibacter ubique HTCC1062 Tl1274307 Xanthomonas campestris pv. campestris str. 8004 157434 Xanthomonas campestris pv. campestris str. 8004 Tl1274308 Thermus thermophilus HB27 333164 Thermus thermophilus HB27 Tl1274309 Escherichia coli SE11 279014 Escherichia coli SE11 Tl1274310 Cupriavidus metallidurans CH34 406045 Cupriavidus metallidurans CH34 Tl1274311 Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) Tl1274312 Geobacter sp. M21 246469 Geobacter sp. M21 Tl1274313 Ruegeria pomeroyi DSS-3 721 Ruegeria pomeroyi DSS-3 Tl1274314 Methylobacterium extorquens DM4 855855 Methylobacterium extorquens DM4 Tl1274315 Chromohalobacter salexigens DSM 3043 272436 Chromohalobacter salexigens DSM 3043 Tl1274316 Burkholderia xenovorans LB400 406050 Burkholderia xenovorans LB400 Tl1274317 Methylocella silvestris BL2 991507 Methylocella silvestris BL2 Tl1274318 Thauera sp. MZ1T 336937 Thauera sp. MZ1T Tl1274319 Methylobacillus flagellatus KT 646867 Methylobacillus flagellatus KT Tl1274320 Caulobacter crescentus CB15 810549 Caulobacter crescentus CB15 Tl1274321 Methylotenera mobilis JLW8 244250 Methylotenera mobilis JLW8 Tl1274322 Ruegeria sp. TM1040 744186 Ruegeria sp. TM1040 Tl1274323 Alkalilimnicola ehrlichei MLHE-1 242940 Alkalilimnicola ehrlichii MLHE-1 Tl1274324 Escherichia coli O157 H7 str Sakai 167422 Escherichia coli O157:H7 str. Sakai Tl1274325 Aromatoleum aromaticum EbN1 816009 Aromatoleum aromaticum EbN1 Tl1274326 Hyphomonas neptunium ATCC 15444 947995 Hyphomonas neptunium ATCC 15444 Tl1274327 Escherichia coli E24377A 36937 Escherichia coli E24377A Tl1274328 Laribacter hongkongensis HLHK9 719292 Laribacter hongkongensis HLHK9 Tl1274329 Cellvibrio japonicus Ueda107 719578 Cellvibrio japonicus Ueda107 Tl1274330 Novosphingobium aromaticivorans DSM 12444 424222 Novosphingobium aromaticivorans DSM 12444 Tl1274331 Campylobacter jejuni RM1221 746906 Campylobacter jejuni RM1221 Tl1274332 Chlamydia trachomatis D UW 3 CX 953200 Chlamydia trachomatis D/UW-3/CX Tl1274333 Sulfurospirillum deleyianum DSM 6946 985345 Sulfurospirillum deleyianum DSM 6946 Tl1274334 Methylobacterium radiotolerans JCM 2831 348417 Methylobacterium radiotolerans JCM 2831 Tl1274335 Sphingomonas wittichii RW1 1056256 Sphingomonas wittichii RW1 Tl1274336 Pseudoalteromonas atlantica T6c 95807 Pseudoalteromonas atlantica T6c Tl1274337 Desulfovibrio magneticus RS 1 526809 Desulfovibrio magneticus RS-1 Tl1274338 Brucella microti CCM 4915 932325 Brucella microti CCM 4915 Tl1274339 Geobacter metallireducens GS 15 672392 Geobacter metallireducens GS-15 Tl1274340 Aggregatibacter actinomycetemcomitans str. D11S 1 1098154 Aggregatibacter actinomycetemcomitans Tl1274341 Edwardsiella tarda EIB202 719583 Edwardsiella tarda EIB202 Tl1274342 Shigella flexneri 2002017 495652 Shigella flexneri 2002017 Tl1274343 Halothiobacillus neapolitanus c2 5172807 Halothiobacillus neapolitanus c2 Tl1274344 Photorhabdus asymbiotica 837339 Photorhabdus asymbiotica Tl1274345 Francisella philomiragia subsp. philomiragia ATCC 25017 219537 Francisella philomiragia subsp. philomiragia ATCC 25017 Tl1274346 Nitrobacter winogradskyi Nb 255 174852 Nitrobacter winogradskyi Nb-255 Tl1274347 Vibrio sp. Ex25 294765 Vibrio sp. Ex25 Tl1274348 Klebsiella variicola At 22 116681 Klebsiella variicola At-22 Tl1274349 Bartonella tribocorum CIP 105476 834239 Bartonella tribocorum CIP 105476 Tl1274350 Vibrio fischeri MJ11 972877 Vibrio fischeri MJ11 Tl1274351 Neorickettsia sennetsu str. Miyayama 312218 Neorickettsia sennetsu str. Miyayama Tl1274352 Baumannia cicadellinicola str. Hc (Homalodisca coagulata) 4790673 Baumannia cicadellinicola str. Hc (Homalodisca coagulata) Tl1274353 Dechloromonas aromatica RCB 78282 Dechloromonas aromatica RCB Tl1274354 Rickettsia rickettsii str. Sheila Smith 621256 Rickettsia rickettsii str. 'Sheila Smith' Tl1274355 Acidovorax ebreus str. TPSY 700374 Acidovorax ebreus TPSY Tl1274356 Desulfovibrio desulfuricans subsp. desulfuricans str. G20 37162 Desulfovibrio desulfuricans Tl1274357 Pseudomonas fluorescens Pf 5 437023 Pseudomonas protegens Pf-5 Tl1274358 Salinispora arenicola CNS 205 405681 Salinispora arenicola ATCC BAA-917 Tl1274359 Mesorhizobium loti str. MAFF303099 1061318 Mesorhizobium loti MAFF303099 Tl1274360 Helicobacter acinonychis str. Sheeba 259613 Helicobacter acinonychis str. Sheeba Tl1274361 Xylella fastidiosa M12 432606 Xylella fastidiosa M12 Tl1274362 Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis 1065772 Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis Tl1274363 Allochromatium vinosum DSM 180 633544 Allochromatium vinosum DSM 180 Tl1274364 Acidiphilium cryptum JF 5 435499 Acidiphilium cryptum JF-5 Tl1274365 Rhodospirillum rubrum ATCC 11170 672388 Rhodospirillum rubrum ATCC 11170 Tl1274366 Stenotrophomonas maltophilia R551 3 389587 Stenotrophomonas maltophilia R551-3 Tl1274367 Clostridium difficile 630 953193 Clostridium difficile 630 Tl1274368 Bradyrhizobium sp. ORS278 724754 Bradyrhizobium sp. ORS 278 Tl1274369 Wolinella succinogenes DSM 1740 832895 Wolinella succinogenes DSM 1740 Tl1274370 Nitrosococcus watsoni str. C-113 976775 Nitrosococcus watsonii C-113 Tl1274371 Shewanella loihica PV 4 200007 Shewanella loihica PV-4 Tl1274372 Gluconacetobacter diazotrophicus PAl 5 953173 Gluconacetobacter diazotrophicus PAl 5 Tl1274373 Proteus mirabilis HI4320 908209 Proteus mirabilis HI4320 Tl1274374 Psychrobacter sp. PRwf 1 587504 Psychrobacter sp. PRwf-1 Tl1274375 Citrobacter koseri ATCC BAA 895 16131 Citrobacter koseri ATCC BAA-895 Tl1274376 Arcobacter butzleri RM4018 1067886 Arcobacter butzleri RM4018 Tl1274377 Paracoccus denitrificans str. PD1222 215157 Paracoccus denitrificans PD1222 Tl1274378 Flavobacterium psychrophilum JIP02 86 268513 Flavobacterium psychrophilum JIP02/86 Tl1274379 Azorhizobium caulinodans ORS 571 1078826 Azorhizobium caulinodans ORS 571 Tl1274380 Pantoea ananatis LMG 20103 34130 Pantoea ananatis LMG 20103 Tl1274381 Escherichia coli O157 H7 str TW14359 945559 Escherichia coli O157:H7 str. TW14359 Tl1274382 Shewanella sp. MR-4 915504 Shewanella sp. MR-4 Tl1274383 Rickettsia africae ESF 5 468613 Rickettsia africae ESF-5 Tl1274384 Rickettsia peacockii str. Rustic 205820 Rickettsia peacockii str. Rustic Tl1274385 Vibrio vulnificus CMCP6 641143 Vibrio vulnificus CMCP6 Tl1274386 Photobacterium profundum SS9 267673 Photobacterium profundum SS9 Tl1274387 Methylotenera sp. 301 109382 Methylotenera versatilis 301 Tl1274388 Brucella melitensis ATCC 23457 854157 Brucella melitensis ATCC 23457 Tl1274389 Buchnera aphidicola str. 5A (Acyrthosiphon pisum) 1053197 Buchnera aphidicola str. 5A (Acyrthosiphon pisum) Tl1274390 Alcanivorax borkumensis SK2 37386 Alcanivorax borkumensis SK2 Tl1274391 Shewanella denitrificans OS217 347460 Shewanella denitrificans OS217 Tl1274392 Pseudomonas syringae pv. tomato str. DC3000 341792 Pseudomonas syringae pv. tomato str. DC3000 Tl1274393 Deinococcus radiodurans R1 103411 Deinococcus radiodurans R1 Tl1274394 Yersinia pseudotuberculosis IP 31758 735111 Yersinia pseudotuberculosis IP 31758 Tl1274395 Legionella pneumophila str. Lens 860729 Legionella pneumophila str. Lens Tl1274396 Rhodobacter sphaeroides ATCC 17025 587509 Rhodobacter sphaeroides ATCC 17025 Tl1274397 Treponema denticola ATCC 35405 205400 Treponema denticola ATCC 35405 Tl1274398 Shewanella amazonensis SB2B 569594 Shewanella amazonensis SB2B Tl1274399 Geobacter sulfurreducens KN400 917173 Geobacter sulfurreducens KN400 Tl1274400 Methylobacterium nodulans ORS 2060 821492 Methylobacterium nodulans ORS 2060 Tl1274401 Bartonella henselae str. Houston-1 450951 Bartonella henselae str. Houston-1 Tl1274402 Idiomarina loihiensis L2TR 476481 Idiomarina loihiensis L2TR Tl1274403 Xanthomonas campestris pv. vesicatoria str. 85-10 187072 Xanthomonas campestris pv. vesicatoria str. 85-10 Tl1274404 Marinomonas sp. MWYL1 655012 Marinomonas sp. MWYL1 Tl1274405 Thioalkalivibrio sulfidophilus HL-EbGr7 783590 Thioalkalivibrio sulfidophilus HL-EbGr7 Tl1274406 Shewanella sp. ANA-3 921181 Shewanella sp. ANA-3 Tl1274407 Pectobacterium atrosepticum SCRI1043 566519 Pectobacterium atrosepticum SCRI1043 Tl1274408 Azotobacter vinelandii DJ 703293 Azotobacter vinelandii DJ Tl1274409 Propionibacterium acnes KPA171202 7026 Propionibacterium acnes KPA171202 Tl1274410 Pseudomonas aeruginosa UCBPP PA14 256109 Pseudomonas aeruginosa UCBPP-PA14 Tl1274411 Comamonas testosteroni CNB 2 705173 Comamonas testosteroni CNB-2 Tl1274412 Pseudomonas putida KT2440 197146 Pseudomonas putida KT2440 Tl1274413 Anaplasma phagocytophilum HZ 961231 Anaplasma phagocytophilum HZ Tl1274414 Escherichia coli DH1 596999 Escherichia coli DH1 Tl1274415 Clavibacter michiganensis subsp. michiganensis NCPPB 382 271819 Clavibacter michiganensis subsp. michiganensis NCPPB 382 Tl1274416 Escherichia coli ED1a 473115 Escherichia coli ED1a Tl1274417 Wolbachia sp. wRi 264111 Wolbachia sp. wRi Tl1274418 Campylobacter fetus subsp. fetus 82-40 962619 Campylobacter fetus subsp. fetus 82-40 Tl1274419 Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough 968867 Desulfovibrio vulgaris str. Hildenborough Tl1274420 Caulobacter sp. K31 181615 Caulobacter sp. K31 Tl1274421 Burkholderia sp. 383 Tl1274422 Psychromonas ingrahamii 37 732486 Psychromonas ingrahamii 37 Tl1274423 Methylobacterium sp. 4-46 561781 Methylobacterium sp. 4-46 Tl1274424 Lactobacillus plantarum WCFS1 433663 Lactobacillus plantarum WCFS1 Tl1274425 Mannheimia succiniciproducens MBEL55E 613393 Mannheimia succiniciproducens MBEL55E Tl1274426 Pasteurella multocida subsp. multocida str. Pm70 724317 Pasteurella multocida subsp. multocida str. Pm70 Tl1274427 Pseudomonas syringae pv. phaseolicola 1448A 59731 Pseudomonas syringae pv. phaseolicola 1448A Tl1274428 Desulfomicrobium baculatum DSM 4028 5164405 Desulfomicrobium baculatum DSM 4028 Tl1274429 Rhizobium etli CIAT 652 1073024 Rhizobium etli CIAT 652 Tl1274430 Escherichia coli str. IAI39 56097 Escherichia coli IAI39 Tl1274431 Haemophilus ducreyi 35000HP 1065271 Haemophilus ducreyi 35000HP Tl1274432 Shewanella putrefaciens CN 32 377327 Shewanella putrefaciens CN-32 Tl1274433 Burkholderia ambifaria AMMD 979193 Burkholderia ambifaria AMMD Tl1274434 Shewanella sp. W3-18-1 199617 Shewanella sp. W3-18-1 Tl1274435 Shigella dysenteriae Sd197 1091301 Shigella dysenteriae Sd197 Tl1274436 Gluconobacter oxydans 621H 106963 Gluconobacter oxydans 621H Tl1274437 Escherichia coli O103 H2 str 12009 473122 Escherichia coli O103:H2 str. 12009 Tl1274438 Yersinia pestis CO92 289021 Yersinia pestis CO92 Tl1274439 Bordetella pertussis Tohama I 133240 Bordetella pertussis Tohama I Tl1274440 Desulfatibacillum alkenivorans AK 01 712705 Desulfatibacillum alkenivorans AK-01 Tl1274441 Chlorobium tepidum TLS 775069 Chlorobium tepidum TLS Tl1274442 Rickettsia canadensis str. McKiel 69969 Rickettsia canadensis str. McKiel Tl1274443 Roseobacter denitrificans OCh 114 906057 Roseobacter denitrificans OCh 114 Tl1274444 Erwinia pyrifoliae Ep1 96 508173 Erwinia pyrifoliae Ep1/96 Tl1274445 Desulfohalobium retbaense DSM 5692 255060 Desulfohalobium retbaense DSM 5692 Tl1274446 Zymomonas mobilis subsp. mobilis NCIB-11163 26197 Zymomonas mobilis subsp. mobilis NCIMB 11163 Tl1274447 Acidithiobacillus ferrooxidans ATCC 23270 1018540 Acidithiobacillus ferrooxidans ATCC 23270 Tl1274448 Rickettsia massiliae MTU5 214493 Rickettsia massiliae MTU5 Tl1274449 Burkholderia sp. CCGE1002 365888 Burkholderia sp. CCGE1002 Tl1274450 Rickettsia prowazekii str. Madrid E 92213 Rickettsia prowazekii str. Madrid E Tl1274451 Kangiella koreensis DSM 16069 409878 Kangiella koreensis DSM 16069 Tl1274452 Desulfotalea psychrophila LSv54 10792 Desulfotalea psychrophila LSv54 Tl1274453 Campylobacter concisus 13826 962613 Campylobacter concisus 13826 Tl1274454 Magnetococcus sp. MC-1 79418 Magnetococcus marinus MC-1 Tl1274455 Yersinia pestis Nepal516 894988 Yersinia pestis Nepal516 Tl1274456 Thermotoga maritima MSB8 205396 Thermotoga maritima MSB8 Tl1274457 Psychrobacter cryohalolentis K5 646041 Psychrobacter cryohalolentis K5 Tl1274458 Rickettsia bellii RML369 C 415258 Rickettsia bellii RML369-C Tl1274459 Caulobacter segnis ATCC 21756 1049058 Caulobacter segnis ATCC 21756 Tl1274460 Nitrosospira multiformis ATCC 25196 774060 Nitrosospira multiformis ATCC 25196 Tl1274461 Escherichia coli O157 H7 EDL933 273352 Escherichia coli O157:H7 str. EDL933 Tl1274462 Actinobacillus pleuropneumoniae serovar 3 str. JL03 28145 Actinobacillus pleuropneumoniae serovar 3 str. JL03 Tl1274463 Erythrobacter litoralis HTCC2594 119414 Erythrobacter litoralis HTCC2594 Tl1274464 Candidatus Vesicomyosocius okutanii HA 4790546 Candidatus Vesicomyosocius okutanii HA Tl1274465 Escherichia coli 536 336391 Escherichia coli 536 Tl1274466 Ochrobactrum anthropi ATCC 49188 784437 Ochrobactrum anthropi ATCC 49188 Tl1274467 Aliivibrio salmonicida LFI1238 187089 Aliivibrio salmonicida LFI1238 Tl1274468 Escherichia coli O111 H str 11128 997143 Escherichia coli O111 Tl1274469 Desulfitobacterium hafniense Y51 184301 Desulfitobacterium hafniense Y51 Tl1274470 Burkholderia pseudomallei 1106a 740063 Burkholderia pseudomallei 1106a Tl1274471 Thiomonas intermedia K12 4775969 Thiomonas intermedia K12 Tl1274472 Escherichia coli O55 H7 str CB9615 951922 Escherichia coli O55:H7 str. CB9615 Tl1274473 Ralstonia pickettii 12J 791878 Ralstonia pickettii 12J Tl1274474 Yersinia pseudotuberculosis IP 32953 832899 Yersinia pseudotuberculosis IP 32953 Tl1274475 Shewanella sediminis HAW EB3 775503 Shewanella sediminis HAW-EB3 Tl1274476 Francisella tularensis subsp. novicida U112 359436 Francisella novicida U112 Tl1274477 Nitrobacter hamburgensis X14 301225 Nitrobacter hamburgensis X14 Tl1274478 Granulibacter bethesdensis CGDNIH1 555938 Granulibacter bethesdensis CGDNIH1 Tl1274479 Ehrlichia chaffeensis str. Arkansas 607799 Ehrlichia chaffeensis str. Arkansas Tl1274480 Neorickettsia risticii str. Illinois 101661 Neorickettsia risticii str. Illinois Tl1274481 Candidatus Blochmannia pennsylvanicus str. BPEN Tl1274482 Shewanella oneidensis MR 1 761824 Shewanella oneidensis MR-1 Tl1274483 Edwardsiella ictaluri 93 146 1098499 Edwardsiella ictaluri 93-146 Tl1274484 Haemophilus parasuis SH0165 997241 Haemophilus parasuis SH0165 Tl1274485 Geobacter bemidjiensis Bem 905015 Geobacter bemidjiensis Bem Tl1274486 Planctomyces limnophilus DSM 3776 79716 Planctomyces limnophilus DSM 3776 Tl1274487 Photorhabdus luminescens subsp. laumondii TTO1 728711 Photorhabdus luminescens subsp. laumondii TTO1 Tl1274488 Variovorax paradoxus S110 109974 Variovorax paradoxus S110 Tl1274489 Yersinia pestis Antiqua 962610 Yersinia pestis Antiqua Tl1274490 Vibrio cholerae M66 2 899268 Vibrio cholerae M66-2 Tl1274491 Helicobacter mustelae 12198 461472 Helicobacter mustelae 12198 Tl1274492 Yersinia pestis KIM 10 276884 Yersinia pestis KIM10+ Tl1274493 Lawsonia intracellularis PHE MN1 00 731046 Lawsonia intracellularis PHE/MN1-00 Tl1274494 Sideroxydans lithotrophicus str. ES-1 702836 Sideroxydans lithotrophicus ES-1 Tl1274495 Sinorhizobium meliloti 1021 1061321 Sinorhizobium meliloti 1021 Tl1274496 Bartonella quintana str. Toulouse 450958 Bartonella quintana str. Toulouse Tl1274497 Agrobacterium vitis S4 486550 Agrobacterium vitis S4 Tl1274498 Starkeya novella DSM 506 845242 Starkeya novella DSM 506 Tl1274499 Vibrio harveyi ATCC BAA 1116 358284 Vibrio campbellii ATCC BAA-1116 Tl1274500 Tolumonas auensis DSM 9187 519603 Tolumonas auensis DSM 9187 Tl1274501 Acinetobacter sp. ADP1 703641 Acinetobacter sp. ADP1 Tl1274502 Streptomyces coelicolor A3 2 954695 Streptomyces coelicolor A3(2) Tl1274503 Maricaulis maris MCS10 213727 Maricaulis maris MCS10 Tl1274504 Aeromonas hydrophila subsp. hydrophila ATCC 7966 58146 Aeromonas hydrophila subsp. hydrophila ATCC 7966 Tl1274505 Burkholderia glumae BGR1 884172 Burkholderia glumae BGR1 Tl1274506 Brucella abortus bv. 1 str. 9-941 484931 Brucella abortus bv. 1 str. 9-941 Tl1274507 ot:substitutionCount con 50 majrule node1108043 node1108033 false true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true true