{"sha": "c33806c9ee11db205ee8c02a42e31b1c3128e299", "data": {"nexml": {"@generator": "Phylografter nexml-json exporter", "@id": "study", "@nexml2json": "0.0.0", "@nexmljson": "http://purl.org/opentree/nexson", "@version": "0.9", "@xmlns": {"$": "http://www.nexml.org/2009", "nex": "http://www.nexml.org/2009", "ot": "http://purl.org/opentree-terms#", "xsd": "http://www.w3.org/2001/XMLSchema#", "xsi": "http://www.w3.org/2001/XMLSchema-instance"}, "otus": {"@id": "otus2770", "otu": [{"@id": "otu412208", "@about": "#otu412208", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Plasmodium simiovale"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 884555}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Plasmodium simiovale"}]}, {"@id": "otu412209", "@about": "#otu412209", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Plasmodium vivax"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 352295}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Plasmodium vivax"}]}, {"@id": "otu412210", "@about": "#otu412210", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Plasmodium simium"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 352308}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Plasmodium simium"}]}, {"@id": "otu412211", "@about": "#otu412211", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Plasmodium cynomolgi"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 724406}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Plasmodium cynomolgi"}]}, {"@id": "otu412212", "@about": "#otu412212", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Plasmodium knowlesi"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 352298}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Plasmodium knowlesi"}]}, {"@id": "otu412213", "@about": "#otu412213", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Plasmodium sp"}]}, {"@id": "otu412214", "@about": "#otu412214", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Plasmodium gonderi"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 641629}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Plasmodium gonderi"}]}, {"@id": "otu412215", "@about": "#otu412215", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Plasmodium malariae"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 352307}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Plasmodium malariae"}]}, {"@id": "otu412216", "@about": "#otu412216", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Plasmodium ovale"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 1004827}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Plasmodium ovale"}]}, {"@id": "otu412217", "@about": "#otu412217", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Plasmodium yoelii"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 826551}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Plasmodium yoelii"}]}, {"@id": "otu412218", "@about": "#otu412218", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Plasmodium berghei"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 724398}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Plasmodium berghei"}]}, {"@id": "otu412219", "@about": "#otu412219", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Plasmodium chabaudi"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 724404}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Plasmodium chabaudi"}]}, {"@id": "otu412220", "@about": "#otu412220", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Plasmodium gallinaceum"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 877122}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Plasmodium gallinaceum"}]}, {"@id": "otu412221", "@about": "#otu412221", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Leucocytozoon caulleryi"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 238458}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Leucocytozoon caulleryi"}]}, {"@id": "otu412222", "@about": "#otu412222", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Plasmodium juxtanucleare"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 218076}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Plasmodium juxtanucleare"}]}, {"@id": "otu412223", "@about": "#otu412223", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Plasmodium gaboni"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 730193}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Plasmodium gaboni"}]}, {"@id": "otu412224", "@about": "#otu412224", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Plasmodium reichenowi"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 352293}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Plasmodium reichenowi"}]}, {"@id": "otu412225", "@about": "#otu412225", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Plasmodium falciparum"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 201128}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Plasmodium falciparum"}]}], "@about": "#otus2770"}, "trees": {"@otus": "otus2770", "@id": "trees2770", "tree": [{"@label": "Untitled (tree6417)", "@xsi:type": "nex:FloatTree", "node": [{"@root": true, "@id": "node1115739", "@about": "#node1115739"}, {"@id": "node1115740", "@about": "#node1115740"}, {"@id": "node1115741", "@about": "#node1115741"}, {"@id": "node1115742", "@about": "#node1115742"}, {"@id": "node1115743", "@about": "#node1115743"}, {"@id": "node1115744", "@about": "#node1115744"}, {"@id": "node1115745", "@about": "#node1115745"}, {"@id": "node1115746", "@about": "#node1115746"}, {"@id": "node1115747", "@about": "#node1115747"}, {"@otu": "otu412208", "@id": "node1115748", "@about": "#node1115748", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node1115749", "@about": "#node1115749"}, {"@id": "node1115750", "@about": "#node1115750"}, {"@otu": "otu412209", "@id": "node1115751", "@about": "#node1115751", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu412210", "@id": "node1115752", "@about": "#node1115752", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu412211", "@id": "node1115753", "@about": "#node1115753", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu412212", "@id": "node1115754", "@about": "#node1115754", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node1115755", "@about": "#node1115755"}, {"@otu": "otu412213", "@id": "node1115756", "@about": "#node1115756", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu412214", "@id": "node1115757", "@about": "#node1115757", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu412215", "@id": "node1115758", "@about": "#node1115758", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu412216", "@id": "node1115759", "@about": "#node1115759", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node1115760", "@about": "#node1115760"}, {"@id": "node1115761", "@about": "#node1115761"}, {"@otu": "otu412217", "@id": "node1115762", "@about": "#node1115762", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu412218", "@id": "node1115763", "@about": "#node1115763", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu412219", "@id": "node1115764", "@about": "#node1115764", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node1115765", "@about": "#node1115765"}, {"@otu": "otu412220", "@id": "node1115766", "@about": "#node1115766", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node1115767", "@about": "#node1115767"}, {"@otu": "otu412221", "@id": "node1115768", "@about": "#node1115768", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu412222", "@id": "node1115769", "@about": "#node1115769", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu412223", "@id": "node1115770", "@about": "#node1115770", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu412224", "@id": "node1115771", "@about": "#node1115771", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu412225", "@id": "node1115772", "@about": "#node1115772", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}], "edge": [{"@length": 0.061514, "@source": "node1115739", "@target": "node1115740", "@id": "edge1115740", "@about": "#edge1115740"}, {"@length": 0.158517, "@source": "node1115740", "@target": "node1115741", "@id": "edge1115741", "@about": "#edge1115741"}, {"@length": 0.024902, "@source": "node1115741", "@target": "node1115742", "@id": "edge1115742", "@about": "#edge1115742"}, {"@length": 0.027645, "@source": "node1115742", "@target": "node1115743", "@id": "edge1115743", "@about": "#edge1115743"}, {"@length": 0.009094, "@source": "node1115743", "@target": "node1115744", "@id": "edge1115744", "@about": "#edge1115744"}, {"@length": 0.043742, "@source": "node1115744", "@target": "node1115745", "@id": "edge1115745", "@about": "#edge1115745"}, {"@length": 0.024723, "@source": "node1115745", "@target": "node1115746", "@id": "edge1115746", "@about": "#edge1115746"}, {"@length": 0.007076, "@source": "node1115746", "@target": "node1115747", "@id": "edge1115747", "@about": "#edge1115747"}, {"@length": 0.012441, "@source": "node1115747", "@target": "node1115748", "@id": "edge1115748", "@about": "#edge1115748"}, {"@length": 0.003583, "@source": "node1115747", "@target": "node1115749", "@id": "edge1115749", "@about": "#edge1115749"}, {"@length": 0.012911, "@source": "node1115749", "@target": "node1115750", "@id": "edge1115750", "@about": "#edge1115750"}, {"@length": 0.000364, "@source": "node1115750", "@target": "node1115751", "@id": "edge1115751", "@about": "#edge1115751"}, {"@length": 0.000802, "@source": "node1115750", "@target": "node1115752", "@id": "edge1115752", "@about": "#edge1115752"}, {"@length": 0.008664, "@source": "node1115749", "@target": "node1115753", "@id": "edge1115753", "@about": "#edge1115753"}, {"@length": 0.038016, "@source": "node1115746", "@target": "node1115754", "@id": "edge1115754", "@about": "#edge1115754"}, {"@length": 0.025857, "@source": "node1115745", "@target": "node1115755", "@id": "edge1115755", "@about": "#edge1115755"}, {"@length": 0.040104, "@source": "node1115755", "@target": "node1115756", "@id": "edge1115756", "@about": "#edge1115756"}, {"@length": 0.020946, "@source": "node1115755", "@target": "node1115757", "@id": "edge1115757", "@about": "#edge1115757"}, {"@length": 0.084608, "@source": "node1115744", "@target": "node1115758", "@id": "edge1115758", "@about": "#edge1115758"}, {"@length": 0.066104, "@source": "node1115743", "@target": "node1115759", "@id": "edge1115759", "@about": "#edge1115759"}, {"@length": 0.105293, "@source": "node1115742", "@target": "node1115760", "@id": "edge1115760", "@about": "#edge1115760"}, {"@length": 0.040672, "@source": "node1115760", "@target": "node1115761", "@id": "edge1115761", "@about": "#edge1115761"}, {"@length": 0.019592, "@source": "node1115761", "@target": "node1115762", "@id": "edge1115762", "@about": "#edge1115762"}, {"@length": 0.032187, "@source": "node1115761", "@target": "node1115763", "@id": "edge1115763", "@about": "#edge1115763"}, {"@length": 0.082783, "@source": "node1115760", "@target": "node1115764", "@id": "edge1115764", "@about": "#edge1115764"}, {"@length": 0.101307, "@source": "node1115741", "@target": "node1115765", "@id": "edge1115765", "@about": "#edge1115765"}, {"@length": 0.066827, "@source": "node1115765", "@target": "node1115766", "@id": "edge1115766", "@about": "#edge1115766"}, {"@length": 0.017588, "@source": "node1115765", "@target": "node1115767", "@id": "edge1115767", "@about": "#edge1115767"}, {"@length": 0.166975, "@source": "node1115767", "@target": "node1115768", "@id": "edge1115768", "@about": "#edge1115768"}, {"@length": 0.089084, "@source": "node1115767", "@target": "node1115769", "@id": "edge1115769", "@about": "#edge1115769"}, {"@length": 0.123371, "@source": "node1115740", "@target": "node1115770", "@id": "edge1115770", "@about": "#edge1115770"}, {"@length": 0.030251, "@source": "node1115739", "@target": "node1115771", "@id": "edge1115771", "@about": "#edge1115771"}, {"@length": 0.02874, "@source": "node1115739", "@target": "node1115772", "@id": "edge1115772", "@about": "#edge1115772"}], "@id": "tree6417", "@about": "#tree6417", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:branchLengthDescription", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:branchLengthMode", "@datatype": "xsd:string", "$": "ot:substitutionCount"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:branchLengthTimeUnit", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:curatedType", "@datatype": "xsd:string", "$": "Maximum likelihood "}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:inGroupClade", "@datatype": "xsd:string", "$": "node1115740"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:nodeLabelMode", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:nodeLabelTimeUnit", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:outGroupEdge", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:specifiedRoot", "@datatype": "xsd:string", "$": "node1115739"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:unrootedTree", "@datatype": "xsd:boolean", "$": false}]}], "@about": "#trees2770"}, "@about": "#study", "meta": [{"agent": [{"@description": "Open Tree NexSON validation", "@id": "peyotl-validator", "@name": "api.opentreeoflife.org/validate", "@url": "https://github.com/OpenTreeOfLife/peyotl", "@version": "0.0.4a", "invocation": {"commandLine": [], "otherProperty": [{"name": "pythonVersion", "value": "2.7.5+"}, {"name": "pythonImplementation", "value": "CPython"}]}, "@about": "#peyotl-validator"}, {"@description": "Web-based interface for submitting, editing, and reviewing studies in the Open Tree of Life project.", "@id": "opentree-curation-webapp", "@name": "OpenTree curation webapp", "@url": "https://github.com/OpenTreeOfLife/opentree", "@version": "0.0.0", "@about": "#opentree-curation-webapp"}], "@xsi:type": "nex:LiteralMeta", "@property": "ot:agents"}, {"annotation": [{"@dateCreated": "2014-07-26T01:01:25.146Z", "@description": "Aids for mapping study OTUs to OTT taxa", "@id": "otu-mapping-hints", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "OTU_MAPPING_HINTS", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"searchContext": {"$": "SAR group"}, "substitutions": {"substitution": [{"@active": false, "@valid": true, "new": {"$": ""}, "old": {"$": ""}}]}}, "refersTo": {"@top": {"$": "meta"}}}], "@about": "#otu-mapping-hints"}, {"@dateCreated": "2014-07-26T01:01:25.146Z", "@description": "Describes supporting data files for this study", "@id": "supporting-files-metadata", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "SUPPORTING_FILE_INFO", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"@movedToPermanentArchive": false, "files": {"file": []}}, "refersTo": {"@top": {"$": "meta"}}}], "@about": "#supporting-files-metadata"}, {"@id": "peyotl-validator-event", "@description": "Open Tree NexSON validation", "@wasAssociatedWithAgentId": "peyotl-validator", "@passedChecks": true, "@preserve": false, "message": [{"@code": "MISSING_OPTIONAL_KEY", "data": ["^ot:ottId"], "refersTo": {"@top": "otus", "@idref": "otu412213", "@otusID": "otus2770", "@otuID": "otu412213"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:comment"], "refersTo": {"@top": "nexml", "@idref": "study"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:nodeLabelMode", "^ot:nodeLabelTimeUnit", "^ot:reasonsToExcludeFromSynthesis"], "refersTo": {"@top": "trees", "@idref": "tree6417", "@treesID": "trees2770", "@treeID": "tree6417"}, "@severity": "WARNING"}], "@about": "#peyotl-validator-event"}], "@xsi:type": "nex:LiteralMeta", "@property": "ot:annotationEvents"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:candidateTreeForSynthesis", "@datatype": "xsd:string", "$": "tree6417"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:comment", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:curatorName", "@datatype": "xsd:string", "$": "Dail Laughinghouse"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:curatorName", "@datatype": "xsd:string", "$": "Benjamin Redelings"}, {"@href": "", "@xsi:type": "nex:ResourceMeta", "@rel": "ot:dataDeposit"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:focalClade", "@datatype": "xsd:int", "$": 724399}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:focalCladeOTTTaxonName", "@datatype": "xsd:string", "$": "Plasmodium"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:studyId", "@datatype": "xsd:string", "$": "pg_2770"}, {"@href": "http://dx.doi.org/10.1371/journal.ppat.1000446", "@xsi:type": "nex:ResourceMeta", "@rel": "ot:studyPublication"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:studyPublicationReference", "@datatype": "xsd:string", "$": "Benjamin Ollomo, Patrick Durand, Franck Prugnolle, Emmanuel Douzery, Celine Arnathau, Dieudonne Nkoghe, Eric Leroy, Francois Renaud, 2009, 'A New Malaria Agent in African Hominids', PLoS Pathogens, vol. 5, no. 5, p. e1000446"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:studyYear", "@datatype": "xsd:int", "$": 2009}]}}, "branch2sha": {"master": "c33806c9ee11db205ee8c02a42e31b1c3128e299"}, "commentHTML": "", "duplicateStudyIDs": [], "shardName": "phylesystem-1", "versionHistory": [{"id": "c8f8ee65c367bf362e97365dd230d36452e9c45d", "author_name": "Benjamin Redelings", "author_email": "benjamin.redelings@gmail.com", "date": "Sun, 19 Feb 2017 21:48:55 +0000", "date_ISO_8601": "2017-02-19 21:48:55 +0000", "relative_date": "9 years ago", "message_subject": "Remove some UTF  chars.", "message_body": "(Update document 'pg_2770' via OpenTree API)"}, {"id": "185f820beafc1fd240ec657c3186cd9dfb904cb0", "author_name": "Dail Laughinghouse", "author_email": "laughinghouseh@gmail.com", "date": "Sat, 26 Jul 2014 01:02:55 +0000", "date_ISO_8601": "2014-07-26 01:02:55 +0000", "relative_date": "12 years ago", "message_subject": "Update Study #pg_2770 via OpenTree API"}, {"id": "d33fb39501605772a074dffc82affa5344ea9a94", "author_name": "Mark T. Holder", "author_email": "mtholder@gmail.com", "date": "Wed, 11 Jun 2014 22:18:34 -0500", "date_ISO_8601": "2014-06-11 22:18:34 -0500", "relative_date": "12 years ago", "message_subject": "corrected study ids"}, {"id": "3b3d6a16e7715192fa047f07f2b5ea50a91c6398", "author_name": "Mark T. Holder", "author_email": "None", "date": "Tue, 10 Jun 2014 23:09:18 -0500", "date_ISO_8601": "2014-06-10 23:09:18 -0500", "relative_date": "12 years ago", "message_subject": "Sync from phylografter", "message_body": "(Update Study #pg_2770 via OpenTree API)"}, {"id": "593d6fbab385716dc0a12f3fc95133e8b7479b37", "author_name": "Mark T. Holder", "author_email": "mtholder@gmail.com", "date": "Tue, 29 Apr 2014 20:05:19 -0500", "date_ISO_8601": "2014-04-29 20:05:19 -0500", "relative_date": "12 years ago", "message_subject": "initial commit with phylografter files from 29 Apr, 2014"}]}