{"sha": "c33806c9ee11db205ee8c02a42e31b1c3128e299", "data": {"nexml": {"@generator": "Phylografter nexml-json exporter", "@id": "study", "@nexml2json": "0.0.0", "@nexmljson": "http://purl.org/opentree/nexson", "@version": "0.9", "@xmlns": {"$": "http://www.nexml.org/2009", "nex": "http://www.nexml.org/2009", "ot": "http://purl.org/opentree-terms#", "xsd": "http://www.w3.org/2001/XMLSchema#", "xsi": "http://www.w3.org/2001/XMLSchema-instance"}, "otus": {"@id": "otus2807", "otu": [{"@id": "otu415324", "@about": "#otu415324", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Betaeus ensenadensis"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 649551}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Betaeus ensenadensis"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl839777"}]}, {"@id": "otu415325", "@about": "#otu415325", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Betaeus australis"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 1015276}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Betaeus australis"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl839778"}]}, {"@id": "otu415326", "@about": "#otu415326", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Metabetaeus sp."}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 745457}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Metabetaeus sp. HDB-2009"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl839779"}]}, {"@id": "otu415327", "@about": "#otu415327", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Betaeus longidactylus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 545016}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Betaeus longidactylus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl839780"}]}, {"@id": "otu415328", "@about": "#otu415328", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Betaeopsis aequimanus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 767879}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Betaeopsis aequimanus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl839781"}]}, {"@id": "otu415329", "@about": "#otu415329", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Betaeus cf gracilis"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 767298}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Betaeus gracilis"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl839782"}]}, {"@id": "otu415330", "@about": "#otu415330", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Betaeus macginitae"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 299679}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Betaeus macginitieae"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl839783"}]}, {"@id": "otu415331", "@about": "#otu415331", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Betaeus emarginatus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 595602}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Betaeus emarginatus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl839784"}]}, {"@id": "otu415332", "@about": "#otu415332", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Betaeus harfordi"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 751506}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Betaeus harfordi"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl839785"}]}, {"@id": "otu415333", "@about": "#otu415333", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Betaeus setosus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 751520}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Betaeus setosus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl839786"}]}, {"@id": "otu415334", "@about": "#otu415334", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Betaeus harrimani"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 745469}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Betaeus harrimani"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl839787"}]}, {"@id": "otu415335", "@about": "#otu415335", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Betaeus laevifrons"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 924693}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Betaeus levifrons"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl839788"}]}, {"@id": "otu415336", "@about": "#otu415336", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Betaeus lilianae"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 489269}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Betaeus lilianae"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl839789"}]}, {"@id": "otu415337", "@about": "#otu415337", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Betaeus truncatus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 751522}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Betaeus truncatus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl839790"}]}, {"@id": "otu415338", "@about": "#otu415338", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Betaeus granulimanus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 751518}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Betaeus granulimanus"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl839791"}]}, {"@id": "otu415339", "@about": "#otu415339", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:originalLabel", "@datatype": "xsd:string", "$": "Nennalpheus sp."}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottId", "@datatype": "xsd:int", "$": 1065715}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:ottTaxonName", "@datatype": "xsd:string", "$": "Nennalpheus sibogae"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:treebaseOTUId", "@datatype": "xsd:string", "$": "Tl839792"}]}], "@about": "#otus2807"}, "trees": {"@otus": "otus2807", "@id": "trees2807", "tree": [{"@xsi:type": "nex:FloatTree", "node": [{"@root": true, "@id": "node1124166", "@about": "#node1124166"}, {"@otu": "otu415339", "@id": "node1124167", "@about": "#node1124167", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu415326", "@id": "node1124168", "@about": "#node1124168", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node1124169", "@about": "#node1124169"}, {"@otu": "otu415328", "@id": "node1124170", "@about": "#node1124170", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node1124171", "@about": "#node1124171"}, {"@id": "node1124172", "@about": "#node1124172"}, {"@otu": "otu415325", "@id": "node1124173", "@about": "#node1124173", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node1124174", "@about": "#node1124174"}, {"@id": "node1124175", "@about": "#node1124175"}, {"@otu": "otu415337", "@id": "node1124176", "@about": "#node1124176", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node1124177", "@about": "#node1124177"}, {"@id": "node1124178", "@about": "#node1124178"}, {"@otu": "otu415324", "@id": "node1124179", "@about": "#node1124179", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu415335", "@id": "node1124180", "@about": "#node1124180", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node1124181", "@about": "#node1124181"}, {"@otu": "otu415334", "@id": "node1124182", "@about": "#node1124182", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu415327", "@id": "node1124183", "@about": "#node1124183", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node1124184", "@about": "#node1124184"}, {"@id": "node1124185", "@about": "#node1124185"}, {"@otu": "otu415333", "@id": "node1124186", "@about": "#node1124186", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu415329", "@id": "node1124187", "@about": "#node1124187", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node1124188", "@about": "#node1124188"}, {"@otu": "otu415332", "@id": "node1124189", "@about": "#node1124189", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu415330", "@id": "node1124190", "@about": "#node1124190", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node1124191", "@about": "#node1124191"}, {"@otu": "otu415336", "@id": "node1124192", "@about": "#node1124192", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node1124193", "@about": "#node1124193"}, {"@otu": "otu415338", "@id": "node1124194", "@about": "#node1124194", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu415331", "@id": "node1124195", "@about": "#node1124195", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}], "edge": [{"@length": 0.232292, "@source": "node1124166", "@target": "node1124167", "@id": "edge1124167", "@about": "#edge1124167"}, {"@length": 0.289665, "@source": "node1124166", "@target": "node1124168", "@id": "edge1124168", "@about": "#edge1124168"}, {"@length": 0.115748, "@source": "node1124166", "@target": "node1124169", "@id": "edge1124169", "@about": "#edge1124169"}, {"@length": 0.130362, "@source": "node1124169", "@target": "node1124170", "@id": "edge1124170", "@about": "#edge1124170"}, {"@length": 0.08242, "@source": "node1124169", "@target": "node1124171", "@id": "edge1124171", "@about": "#edge1124171"}, {"@length": 0.026949, "@source": "node1124171", "@target": "node1124172", "@id": "edge1124172", "@about": "#edge1124172"}, {"@length": 0.133655, "@source": "node1124172", "@target": "node1124173", "@id": "edge1124173", "@about": "#edge1124173"}, {"@length": 0.048492, "@source": "node1124172", "@target": "node1124174", "@id": "edge1124174", "@about": "#edge1124174"}, {"@length": 0.02737, "@source": "node1124174", "@target": "node1124175", "@id": "edge1124175", "@about": "#edge1124175"}, {"@length": 0.090514, "@source": "node1124175", "@target": "node1124176", "@id": "edge1124176", "@about": "#edge1124176"}, {"@length": 0.035822, "@source": "node1124175", "@target": "node1124177", "@id": "edge1124177", "@about": "#edge1124177"}, {"@length": 0.010565, "@source": "node1124177", "@target": "node1124178", "@id": "edge1124178", "@about": "#edge1124178"}, {"@length": 0.07328, "@source": "node1124178", "@target": "node1124179", "@id": "edge1124179", "@about": "#edge1124179"}, {"@length": 0.045652, "@source": "node1124178", "@target": "node1124180", "@id": "edge1124180", "@about": "#edge1124180"}, {"@length": 0.032333, "@source": "node1124177", "@target": "node1124181", "@id": "edge1124181", "@about": "#edge1124181"}, {"@length": 0.028136, "@source": "node1124181", "@target": "node1124182", "@id": "edge1124182", "@about": "#edge1124182"}, {"@length": 0.03145, "@source": "node1124181", "@target": "node1124183", "@id": "edge1124183", "@about": "#edge1124183"}, {"@length": 0.036894, "@source": "node1124174", "@target": "node1124184", "@id": "edge1124184", "@about": "#edge1124184"}, {"@length": 0.030329, "@source": "node1124184", "@target": "node1124185", "@id": "edge1124185", "@about": "#edge1124185"}, {"@source": "node1124185", "@target": "node1124186", "@id": "edge1124186", "@about": "#edge1124186"}, {"@length": 0.00208, "@source": "node1124185", "@target": "node1124187", "@id": "edge1124187", "@about": "#edge1124187"}, {"@length": 0.045564, "@source": "node1124184", "@target": "node1124188", "@id": "edge1124188", "@about": "#edge1124188"}, {"@length": 0.006671, "@source": "node1124188", "@target": "node1124189", "@id": "edge1124189", "@about": "#edge1124189"}, {"@length": 0.008841, "@source": "node1124188", "@target": "node1124190", "@id": "edge1124190", "@about": "#edge1124190"}, {"@length": 0.022991, "@source": "node1124171", "@target": "node1124191", "@id": "edge1124191", "@about": "#edge1124191"}, {"@length": 0.124385, "@source": "node1124191", "@target": "node1124192", "@id": "edge1124192", "@about": "#edge1124192"}, {"@source": "node1124191", "@target": "node1124193", "@id": "edge1124193", "@about": "#edge1124193"}, {"@length": 0.08308, "@source": "node1124193", "@target": "node1124194", "@id": "edge1124194", "@about": "#edge1124194"}, {"@length": 0.063988, "@source": "node1124193", "@target": "node1124195", "@id": "edge1124195", "@about": "#edge1124195"}], "@id": "tree6518", "@about": "#tree6518", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:branchLengthDescription", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:branchLengthMode", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:branchLengthTimeUnit", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:curatedType", "@datatype": "xsd:string", "$": "NJ"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:outGroupEdge", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:specifiedRoot", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:tag", "@datatype": "xsd:string", "$": "Delete me"}]}, {"@xsi:type": "nex:FloatTree", "node": [{"@root": true, "@id": "node1124196", "@about": "#node1124196"}, {"@id": "node1124197", "@about": "#node1124197"}, {"@id": "node1124198", "@about": "#node1124198"}, {"@id": "node1124199", "@about": "#node1124199"}, {"@id": "node1124200", "@about": "#node1124200"}, {"@id": "node1124201", "@about": "#node1124201"}, {"@id": "node1124202", "@about": "#node1124202"}, {"@id": "node1124203", "@about": "#node1124203"}, {"@otu": "otu415324", "@id": "node1124204", "@about": "#node1124204", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu415335", "@id": "node1124205", "@about": "#node1124205", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node1124206", "@about": "#node1124206"}, {"@otu": "otu415334", "@id": "node1124207", "@about": "#node1124207", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu415327", "@id": "node1124208", "@about": "#node1124208", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu415337", "@id": "node1124209", "@about": "#node1124209", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node1124210", "@about": "#node1124210"}, {"@id": "node1124211", "@about": "#node1124211"}, {"@otu": "otu415333", "@id": "node1124212", "@about": "#node1124212", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu415329", "@id": "node1124213", "@about": "#node1124213", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node1124214", "@about": "#node1124214"}, {"@otu": "otu415332", "@id": "node1124215", "@about": "#node1124215", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu415330", "@id": "node1124216", "@about": "#node1124216", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu415325", "@id": "node1124217", "@about": "#node1124217", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node1124218", "@about": "#node1124218"}, {"@id": "node1124219", "@about": "#node1124219"}, {"@otu": "otu415338", "@id": "node1124220", "@about": "#node1124220", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu415331", "@id": "node1124221", "@about": "#node1124221", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu415336", "@id": "node1124222", "@about": "#node1124222", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu415328", "@id": "node1124223", "@about": "#node1124223", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@id": "node1124224", "@about": "#node1124224"}, {"@otu": "otu415339", "@id": "node1124225", "@about": "#node1124225", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}, {"@otu": "otu415326", "@id": "node1124226", "@about": "#node1124226", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:isLeaf", "@datatype": "xsd:boolean", "$": true}]}], "edge": [{"@length": 0.115748, "@source": "node1124196", "@target": "node1124197", "@id": "edge1124197", "@about": "#edge1124197"}, {"@length": 0.08242, "@source": "node1124197", "@target": "node1124198", "@id": "edge1124198", "@about": "#edge1124198"}, {"@length": 0.026949, "@source": "node1124198", "@target": "node1124199", "@id": "edge1124199", "@about": "#edge1124199"}, {"@length": 0.04849199999999998, "@source": "node1124199", "@target": "node1124200", "@id": "edge1124200", "@about": "#edge1124200"}, {"@length": 0.027370000000000005, "@source": "node1124200", "@target": "node1124201", "@id": "edge1124201", "@about": "#edge1124201"}, {"@length": 0.03582200000000002, "@source": "node1124201", "@target": "node1124202", "@id": "edge1124202", "@about": "#edge1124202"}, {"@length": 0.010564999999999991, "@source": "node1124202", "@target": "node1124203", "@id": "edge1124203", "@about": "#edge1124203"}, {"@length": 0.07328000000000001, "@source": "node1124203", "@target": "node1124204", "@id": "edge1124204", "@about": "#edge1124204"}, {"@length": 0.04565199999999997, "@source": "node1124203", "@target": "node1124205", "@id": "edge1124205", "@about": "#edge1124205"}, {"@length": 0.032333, "@source": "node1124202", "@target": "node1124206", "@id": "edge1124206", "@about": "#edge1124206"}, {"@length": 0.028135999999999994, "@source": "node1124206", "@target": "node1124207", "@id": "edge1124207", "@about": "#edge1124207"}, {"@length": 0.03144999999999998, "@source": "node1124206", "@target": "node1124208", "@id": "edge1124208", "@about": "#edge1124208"}, {"@length": 0.09051399999999998, "@source": "node1124201", "@target": "node1124209", "@id": "edge1124209", "@about": "#edge1124209"}, {"@length": 0.03689399999999998, "@source": "node1124200", "@target": "node1124210", "@id": "edge1124210", "@about": "#edge1124210"}, {"@length": 0.030328999999999995, "@source": "node1124210", "@target": "node1124211", "@id": "edge1124211", "@about": "#edge1124211"}, {"@source": "node1124211", "@target": "node1124212", "@id": "edge1124212", "@about": "#edge1124212"}, {"@length": 0.0020800000000000263, "@source": "node1124211", "@target": "node1124213", "@id": "edge1124213", "@about": "#edge1124213"}, {"@length": 0.04556399999999999, "@source": "node1124210", "@target": "node1124214", "@id": "edge1124214", "@about": "#edge1124214"}, {"@length": 0.0066709999999999825, "@source": "node1124214", "@target": "node1124215", "@id": "edge1124215", "@about": "#edge1124215"}, {"@length": 0.008840999999999988, "@source": "node1124214", "@target": "node1124216", "@id": "edge1124216", "@about": "#edge1124216"}, {"@length": 0.13365499999999997, "@source": "node1124199", "@target": "node1124217", "@id": "edge1124217", "@about": "#edge1124217"}, {"@length": 0.02299100000000001, "@source": "node1124198", "@target": "node1124218", "@id": "edge1124218", "@about": "#edge1124218"}, {"@source": "node1124218", "@target": "node1124219", "@id": "edge1124219", "@about": "#edge1124219"}, {"@length": 0.08308000000000001, "@source": "node1124219", "@target": "node1124220", "@id": "edge1124220", "@about": "#edge1124220"}, {"@length": 0.06398800000000002, "@source": "node1124219", "@target": "node1124221", "@id": "edge1124221", "@about": "#edge1124221"}, {"@length": 0.124385, "@source": "node1124218", "@target": "node1124222", "@id": "edge1124222", "@about": "#edge1124222"}, {"@length": 0.13036199999999998, "@source": "node1124197", "@target": "node1124223", "@id": "edge1124223", "@about": "#edge1124223"}, {"@length": 0.057874, "@source": "node1124196", "@target": "node1124224", "@id": "edge1124224", "@about": "#edge1124224"}, {"@length": 0.232292, "@source": "node1124224", "@target": "node1124225", "@id": "edge1124225", "@about": "#edge1124225"}, {"@length": 0.289665, "@source": "node1124224", "@target": "node1124226", "@id": "edge1124226", "@about": "#edge1124226"}], "@id": "tree6519", "@about": "#tree6519", "meta": [{"@xsi:type": "nex:LiteralMeta", "@property": "ot:branchLengthDescription", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:branchLengthMode", "@datatype": "xsd:string", "$": "ot:substitutionCount"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:branchLengthTimeUnit", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:curatedType", "@datatype": "xsd:string", "$": "BI 50% maj-rule"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:inGroupClade", "@datatype": "xsd:string", "$": "node1124197"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:outGroupEdge", "@datatype": "xsd:string", "$": ""}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:specifiedRoot", "@datatype": "xsd:string", "$": "node1124196"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:tag", "@datatype": "xsd:string", "$": "choose me"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:tag", "@datatype": "xsd:string", "$": "ingroup added;"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:unrootedTree", "@datatype": "xsd:boolean", "$": false}]}], "@about": "#trees2807"}, "@about": "#study", "meta": [{"agent": [{"@description": "validator of NexSON constraints as well as constraints that would allow a study to be imported into the Open Tree of Life's phylogenetic synthesis tools", "@id": "peyotl-validator", "@name": "validate_ot_nexson.py", "@url": "https://github.com/OpenTreeOfLife/peyotl", "@version": "0.0.4a", "invocation": {"commandLine": ["--embed", "--agent-only"], "otherProperty": [{"name": "pythonVersion", "value": "2.7.5+"}, {"name": "pythonImplementation", "value": "CPython"}]}, "@about": "#peyotl-validator"}], "@xsi:type": "nex:LiteralMeta", "@property": "ot:agents"}, {"annotation": [{"@id": "peyotl-validator-event", "@description": "Open Tree NexSON validation", "@wasAssociatedWithAgentId": "peyotl-validator", "@passedChecks": true, "@preserve": false, "message": [{"@code": "MISSING_OPTIONAL_KEY", "data": ["^ot:inGroupClade"], "refersTo": {"@top": "trees", "@idref": "tree6518", "@treesID": "trees2807", "@treeID": "tree6518"}, "@severity": "WARNING"}], "@about": "#peyotl-validator-event"}], "@xsi:type": "nex:LiteralMeta", "@property": "ot:annotationEvents"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:candidateTreeForSynthesis", "@datatype": "xsd:string", "$": "tree6519"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:curatorName", "@datatype": "xsd:string", "$": "Chris Owen"}, {"@href": "http://purl.org/phylo/treebase/phylows/study/TB2:S12658", "@xsi:type": "nex:ResourceMeta", "@rel": "ot:dataDeposit"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:focalClade", "@datatype": "xsd:int", "$": 471793}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:focalCladeOTTTaxonName", "@datatype": "xsd:string", "$": "Alpheidae"}, {"message": [], "@xsi:type": "nex:LiteralMeta", "@property": "ot:messages"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:studyId", "@datatype": "xsd:string", "$": "pg_2807"}, {"@href": "http://dx.doi.org/10.1016/j.ympev.2012.04.015", "@xsi:type": "nex:ResourceMeta", "@rel": "ot:studyPublication"}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:studyPublicationReference", "@datatype": "xsd:string", "$": "Anker, A., & Baeza J. 2012. Molecular and morphological phylogeny of hooded shrimps, genera Betaeus and Betaeopsis (Decapoda, Alpheidae): testing the Center of Origin biogeographic model and evolution of life history traits. Molecular Phylogenetics and Evolution 64 (3): 401-415."}, {"@xsi:type": "nex:LiteralMeta", "@property": "ot:studyYear", "@datatype": "xsd:int", "$": 2012}]}}, "branch2sha": {"master": "c33806c9ee11db205ee8c02a42e31b1c3128e299"}, "commentHTML": "", "duplicateStudyIDs": [], "shardName": "phylesystem-1", "versionHistory": [{"id": "d33fb39501605772a074dffc82affa5344ea9a94", "author_name": "Mark T. Holder", "author_email": "mtholder@gmail.com", "date": "Wed, 11 Jun 2014 22:18:34 -0500", "date_ISO_8601": "2014-06-11 22:18:34 -0500", "relative_date": "12 years ago", "message_subject": "corrected study ids"}, {"id": "f8a738aeda20a73750847484e110a85c7a3e0a12", "author_name": "Mark T. Holder", "author_email": "mtholder@gmail.com", "date": "Tue, 10 Jun 2014 23:36:42 -0500", "date_ISO_8601": "2014-06-10 23:36:42 -0500", "relative_date": "12 years ago", "message_subject": "Migrating info from gcmdr to nexsons", "message_body": "using peyotl d69c8b180fce7703c7203a0b51712eab57e2988c\ndev/decorate_pg_studies_with_gcmdr_info.py\nto set:\n  ^ot:candidateTreeForSynthesis\n  ^ot:specifiedRoot, and\n  ^ot:unrootedTree\nproperties based on the use of the trees for synthesis study\nlists in gcmdr commit 35bf307e72bed4f59724762dde4a12965abcea92"}, {"id": "593d6fbab385716dc0a12f3fc95133e8b7479b37", "author_name": "Mark T. Holder", "author_email": "mtholder@gmail.com", "date": "Tue, 29 Apr 2014 20:05:19 -0500", "date_ISO_8601": "2014-04-29 20:05:19 -0500", "relative_date": "12 years ago", "message_subject": "initial commit with phylografter files from 29 Apr, 2014"}]}