{"sha": "19ec8a2da4b35c55075f155f9fb4d01281774fe5", "data": {"nexml": {"@generator": "Phylografter nexml-json exporter", "@id": "study", "@nexml2json": "1.2.1", "@nexmljson": "http://purl.org/opentree/nexson", "@version": "0.9", "@xmlns": {"$": "http://www.nexml.org/2009", "nex": "http://www.nexml.org/2009", "ot": "http://purl.org/opentree-terms#", "xsd": "http://www.w3.org/2001/XMLSchema#", "xsi": "http://www.w3.org/2001/XMLSchema-instance"}, "^ot:agents": {"agent": [{"@description": "validator of NexSON constraints as well as constraints that would allow a study to be imported into the Open Tree of Life's phylogenetic synthesis tools", "@id": "peyotl-validator", "@name": "validate_ot_nexson.py", "@url": "https://github.com/OpenTreeOfLife/peyotl", "@version": "0.0.4a", "invocation": {"commandLine": ["--embed", "--agent-only"], "otherProperty": [{"name": "pythonVersion", "value": "2.7.5+"}, {"name": "pythonImplementation", "value": "CPython"}]}}, {"@description": "Web-based interface for submitting, editing, and reviewing studies in the Open Tree of Life project.", "@id": "opentree-curation-webapp", "@name": "OpenTree curation webapp", "@url": "https://github.com/OpenTreeOfLife/opentree", "@version": "0.0.0"}]}, "^ot:annotationEvents": {"annotation": [{"@dateCreated": "2014-07-01T16:51:36.904Z", "@description": "Aids for mapping study OTUs to OTT taxa", "@id": "otu-mapping-hints", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "OTU_MAPPING_HINTS", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"autoAcceptExactMatches": false, "searchContext": {"$": "Birds"}, "substitutions": {"substitution": [{"@active": false, "@valid": true, "new": {"$": ""}, "old": {"$": ""}}]}}, "refersTo": {"@top": {"$": "meta"}}}]}, {"@dateCreated": "2014-07-01T16:51:36.904Z", "@description": "Describes supporting data files for this study", "@id": "supporting-files-metadata", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "SUPPORTING_FILE_INFO", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"@movedToPermanentArchive": false, "files": {"file": []}}, "refersTo": {"@top": {"$": "meta"}}}]}, {"@dateCreated": "2023-06-05T18:31:08.181Z", "@description": "Describes external namesets merged into this study", "@id": "merged-namesets-metadata", "@passedChecks": true, "@preserve": true, "@wasAssociatedWithAgentId": "opentree-curation-webapp", "message": [{"@code": "MERGED_NAMESET_INFO", "@humanMessageType": "NONE", "@severity": "INFO", "data": {"namesets": {"nameset": []}}, "refersTo": {"@top": {"$": "meta"}}}]}, {"@id": "peyotl-validator-event", "@description": "Open Tree NexSON validation", "@wasAssociatedWithAgentId": "peyotl-validator", "@passedChecks": true, "@preserve": false, "message": [{"@code": "MULTIPLE_TIPS_MAPPED_TO_OTT_ID", "data": ["otu426686", "otu426687"], "refersTo": {"@top": "otus", "@idref": "otus2866", "@otusID": "otus2866"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:comment"], "refersTo": {"@top": "nexml", "@idref": "study"}, "@severity": "WARNING"}, {"@code": "UNRECOGNIZED_KEY", "data": ["^ot:nodeLabelMode", "^ot:nodeLabelTimeUnit", "^ot:reasonsToExcludeFromSynthesis"], "refersTo": {"@top": "trees", "@idref": "tree6656", "@treesID": "trees2866", "@treeID": "tree6656"}, "@severity": "WARNING"}]}]}, "^ot:candidateTreeForSynthesis": ["tree6656"], "^ot:comment": "", "^ot:curatorName": ["Joseph Brown", "Joseph W. Brown", "jwaterford"], "^ot:dataDeposit": {"@href": ""}, "^ot:focalClade": 241841, "^ot:focalCladeOTTTaxonName": "Anseriformes", "^ot:otusElementOrder": ["otus2866"], "^ot:studyId": "pg_2866", "^ot:studyPublication": {"@href": "http://dx.doi.org/10.1111/j.1469-7998.2009.00622.x"}, "^ot:studyPublicationReference": "Gonzalez, J., H. D\u00fcttmann, M. Wink. 2009. Phylogenetic relationships based on two mitochondrial genes and hybridization patterns in Anatidae. Journal of Zoology 279 (3): 310-318.", "^ot:studyYear": 2009, "^ot:tag": [], "^ot:treesElementOrder": ["trees2866"], "otusById": {"otus2866": {"otuById": {"otu426679": {"^ot:originalLabel": "Anas aucklandica", "^ot:ottId": 656791, "^ot:ottTaxonName": "Anas aucklandica"}, "otu426680": {"^ot:originalLabel": "Anas chlorotis", "^ot:ottId": 656784, "^ot:ottTaxonName": "Anas chlorotis"}, "otu426681": {"^ot:originalLabel": "Anas bernieri", "^ot:ottId": 656779, "^ot:ottTaxonName": "Anas bernieri"}, "otu426682": {"^ot:originalLabel": "Anas castanea", "^ot:ottId": 282355, "^ot:ottTaxonName": "Anas castanea"}, "otu426683": {"^ot:originalLabel": "Anas gibberifrons", "^ot:ottId": 82425, "^ot:ottTaxonName": "Anas gibberifrons"}, "otu426684": {"^ot:originalLabel": "Anas flavirostris flavirostris", "^ot:ottId": 911469, "^ot:ottTaxonName": "Anas flavirostris flavirostris"}, "otu426685": {"^ot:originalLabel": "Anas flavirostris oxyptera", "^ot:ottId": 911476, "^ot:ottTaxonName": "Anas flavirostris oxyptera"}, "otu426686": {"^ot:originalLabel": "Anas carolinensis", "^ot:ottId": 656799, "^ot:ottTaxonName": "Anas crecca"}, "otu426687": {"^ot:originalLabel": "Anas crecca", "^ot:ottId": 656799, "^ot:ottTaxonName": "Anas crecca"}, "otu426688": {"^ot:originalLabel": "Anas acuta", "^ot:ottId": 855474, "^ot:ottTaxonName": "Anas acuta"}, "otu426689": {"^ot:originalLabel": "Anas georgica", "^ot:ottId": 82421, "^ot:ottTaxonName": "Anas georgica"}, "otu426690": {"^ot:originalLabel": "Anas erythrorhyncha", "^ot:ottId": 82414, "^ot:ottTaxonName": "Anas erythrorhyncha"}, "otu426691": {"^ot:originalLabel": "Anas bahamensis", "^ot:ottId": 656778, "^ot:ottTaxonName": "Anas bahamensis"}, "otu426692": {"^ot:originalLabel": "Anas capensis", "^ot:ottId": 765188, "^ot:ottTaxonName": "Anas capensis"}, "otu426693": {"^ot:originalLabel": "Anas diazi", "^ot:ottId": 82410, "^ot:ottTaxonName": "Anas diazi"}, "otu426694": {"^ot:originalLabel": "Anas rubripes", "^ot:ottId": 604178, "^ot:ottTaxonName": "Anas rubripes"}, "otu426695": {"^ot:originalLabel": "Anas fulvigula", "^ot:ottId": 82422, "^ot:ottTaxonName": "Anas fulvigula"}, "otu426696": {"^ot:originalLabel": "Anas platyrhynchos", "^ot:ottId": 765167, "^ot:ottTaxonName": "Anas platyrhynchos"}, "otu426697": {"^ot:originalLabel": "Anas poecilorhyncha", "^ot:ottId": 604182, "^ot:ottTaxonName": "Anas poecilorhyncha"}, "otu426698": {"^ot:originalLabel": "Anas luzonica", "^ot:ottId": 604175, "^ot:ottTaxonName": "Anas luzonica"}, "otu426699": {"^ot:originalLabel": "Anas laysanensis", "^ot:ottId": 339494, "^ot:ottTaxonName": "Anas laysanensis"}, "otu426700": {"^ot:originalLabel": "Anas superciliosa", "^ot:ottId": 962757, "^ot:ottTaxonName": "Anas superciliosa"}, "otu426701": {"^ot:originalLabel": "Anas melleri", "^ot:ottId": 604172, "^ot:ottTaxonName": "Anas melleri"}, "otu426702": {"^ot:originalLabel": "Anas undulata", "^ot:ottId": 30855, "^ot:ottTaxonName": "Anas undulata"}, "otu426703": {"^ot:originalLabel": "Anas sparsa", "^ot:ottId": 30858, "^ot:ottTaxonName": "Anas sparsa"}, "otu426704": {"^ot:originalLabel": "Anas americana", "^ot:ottId": 656788, "^ot:ottTaxonName": "Anas americana"}, "otu426705": {"^ot:originalLabel": "Anas sibilatrix", "^ot:ottId": 604188, "^ot:ottTaxonName": "Anas sibilatrix"}, "otu426706": {"^ot:originalLabel": "Anas penelope", "^ot:ottId": 765180, "^ot:ottTaxonName": "Anas penelope"}, "otu426707": {"^ot:originalLabel": "Anas falcata", "^ot:ottId": 82420, "^ot:ottTaxonName": "Anas falcata"}, "otu426708": {"^ot:originalLabel": "Anas strepera", "^ot:ottId": 30856, "^ot:ottTaxonName": "Anas strepera"}, "otu426709": {"^ot:originalLabel": "Anas clypeata", "^ot:ottId": 656794, "^ot:ottTaxonName": "Anas clypeata"}, "otu426710": {"^ot:originalLabel": "Anas rhynchotis", "^ot:ottId": 962755, "^ot:ottTaxonName": "Anas rhynchotis"}, "otu426711": {"^ot:originalLabel": "Anas smithii", "^ot:ottId": 604189, "^ot:ottTaxonName": "Anas smithii"}, "otu426712": {"^ot:originalLabel": "Anas cyanoptera cyanoptera", "^ot:ottId": 911468, "^ot:ottTaxonName": "Anas cyanoptera cyanoptera"}, "otu426713": {"^ot:originalLabel": "Anas discors", "^ot:ottId": 82415, "^ot:ottTaxonName": "Anas discors"}, "otu426714": {"^ot:originalLabel": "Anas cyanoptera septentrionalium", "^ot:ottId": 206533, "^ot:ottTaxonName": "Anas cyanoptera septentrionalium"}, "otu426715": {"^ot:originalLabel": "Anas platalea", "^ot:ottId": 604173, "^ot:ottTaxonName": "Anas platalea"}, "otu426716": {"^ot:originalLabel": "Anas versicolor puna", "^ot:ottId": 604186, "^ot:ottTaxonName": "Anas puna"}, "otu426717": {"^ot:originalLabel": "Anas versicolor versicolor", "^ot:ottId": 224684, "^ot:ottTaxonName": "Anas versicolor versicolor"}, "otu426718": {"^ot:originalLabel": "Anas hottentota", "^ot:ottId": 82424, "^ot:ottTaxonName": "Anas hottentota"}, "otu426719": {"^ot:originalLabel": "Anas querquedula", "^ot:ottId": 604176, "^ot:ottTaxonName": "Anas querquedula"}, "otu426720": {"^ot:originalLabel": "Anas formosa", "^ot:ottId": 1086566, "^ot:ottTaxonName": "Anas formosa"}, "otu426721": {"^ot:originalLabel": "Amazonetta brasiliensis", "^ot:ottId": 30845, "^ot:ottTaxonName": "Amazonetta brasiliensis"}, "otu426722": {"^ot:originalLabel": "Speculanas specularis", "^ot:ottId": 552042, "^ot:ottTaxonName": "Speculanas specularis"}, "otu426723": {"^ot:originalLabel": "Lophonetta specularioides", "^ot:ottId": 552046, "^ot:ottTaxonName": "Lophonetta specularioides"}, "otu426724": {"^ot:originalLabel": "Tachyeres pteneres", "^ot:ottId": 386305, "^ot:ottTaxonName": "Tachyeres pteneres"}, "otu426725": {"^ot:originalLabel": "Aythya affinis", "^ot:ottId": 1044556, "^ot:ottTaxonName": "Aythya affinis"}, "otu426726": {"^ot:originalLabel": "Aythya marila", "^ot:ottId": 1044561, "^ot:ottTaxonName": "Aythya marila"}, "otu426727": {"^ot:originalLabel": "Aythya fuligula", "^ot:ottId": 817992, "^ot:ottTaxonName": "Aythya fuligula"}, "otu426728": {"^ot:originalLabel": "Aythya americana", "^ot:ottId": 693332, "^ot:ottTaxonName": "Aythya americana"}, "otu426729": {"^ot:originalLabel": "Aythya ferina", "^ot:ottId": 817989, "^ot:ottTaxonName": "Aythya ferina"}, "otu426730": {"^ot:originalLabel": "Aythya australis", "^ot:ottId": 962759, "^ot:ottTaxonName": "Aythya australis"}, "otu426731": {"^ot:originalLabel": "Aythya nyroca", "^ot:ottId": 789865, "^ot:ottTaxonName": "Aythya nyroca"}, "otu426732": {"^ot:originalLabel": "Netta peposaca", "^ot:ottId": 857019, "^ot:ottTaxonName": "Netta peposaca"}, "otu426733": {"^ot:originalLabel": "Netta rufina", "^ot:ottId": 693335, "^ot:ottTaxonName": "Netta rufina"}, "otu426734": {"^ot:originalLabel": "Asarcornis scutulata", "^ot:ottId": 30843, "^ot:ottTaxonName": "Asarcornis scutulata"}, "otu426735": {"^ot:originalLabel": "Marmaronetta angustirostris", "^ot:ottId": 552052, "^ot:ottTaxonName": "Marmaronetta angustirostris"}, "otu426736": {"^ot:originalLabel": "Cyanochen cyanopterus", "^ot:ottId": 140301, "^ot:ottTaxonName": "Cyanochen cyanopterus"}, "otu426737": {"^ot:originalLabel": "Pteronetta hartlaubii", "^ot:ottId": 552056, "^ot:ottTaxonName": "Pteronetta hartlaubi"}, "otu426738": {"^ot:originalLabel": "Chenonetta jubata", "^ot:ottId": 436829, "^ot:ottTaxonName": "Chenonetta jubata"}, "otu426739": {"^ot:originalLabel": "Sarkidiornis melanotos", "^ot:ottId": 88385, "^ot:ottTaxonName": "Sarkidiornis melanotos"}, "otu426740": {"^ot:originalLabel": "Callonetta leucophrys", "^ot:ottId": 552044, "^ot:ottTaxonName": "Callonetta leucophrys"}, "otu426741": {"^ot:originalLabel": "Tadorna tadornoides", "^ot:ottId": 282327, "^ot:ottTaxonName": "Tadorna tadornoides"}, "otu426742": {"^ot:originalLabel": "Tadorna ferruginea", "^ot:ottId": 282323, "^ot:ottTaxonName": "Tadorna ferruginea"}, "otu426743": {"^ot:originalLabel": "Tadorna cana", "^ot:ottId": 857011, "^ot:ottTaxonName": "Tadorna cana"}, "otu426744": {"^ot:originalLabel": "Tadorna tadorna", "^ot:ottId": 30847, "^ot:ottTaxonName": "Tadorna tadorna"}, "otu426745": {"^ot:originalLabel": "Alopochen aegyptiacus", "^ot:ottId": 693339, "^ot:ottTaxonName": "Alopochen aegyptiacus"}, "otu426746": {"^ot:originalLabel": "Tadorna radjah", "^ot:ottId": 522863, "^ot:ottTaxonName": "Tadorna radjah"}, "otu426747": {"^ot:originalLabel": "Chloephaga picta", "^ot:ottId": 140309, "^ot:ottTaxonName": "Chloephaga picta"}, "otu426748": {"^ot:originalLabel": "Chloephaga poliocephala", "^ot:ottId": 332099, "^ot:ottTaxonName": "Chloephaga poliocephala"}, "otu426749": {"^ot:originalLabel": "Aix galericulata", "^ot:ottId": 765197, "^ot:ottTaxonName": "Aix galericulata"}, "otu426750": {"^ot:originalLabel": "Aix sponsa", "^ot:ottId": 765195, "^ot:ottTaxonName": "Aix sponsa"}, "otu426751": {"^ot:originalLabel": "Cairina moschata", "^ot:ottId": 714469, "^ot:ottTaxonName": "Cairina moschata"}, "otu426752": {"^ot:originalLabel": "Mergus merganser", "^ot:ottId": 88388, "^ot:ottTaxonName": "Mergus merganser"}, "otu426753": {"^ot:originalLabel": "Mergus serrator", "^ot:ottId": 662625, "^ot:ottTaxonName": "Mergus serrator"}, "otu426754": {"^ot:originalLabel": "Lophodytes cucullatus", "^ot:ottId": 809009, "^ot:ottTaxonName": "Lophodytes cucullatus"}, "otu426755": {"^ot:originalLabel": "Mergellus albellus", "^ot:ottId": 166692, "^ot:ottTaxonName": "Mergellus albellus"}, "otu426756": {"^ot:originalLabel": "Bucephala clangula", "^ot:ottId": 166683, "^ot:ottTaxonName": "Bucephala clangula"}, "otu426757": {"^ot:originalLabel": "Bucephala islandica", "^ot:ottId": 780952, "^ot:ottTaxonName": "Bucephala islandica"}, "otu426758": {"^ot:originalLabel": "Bucephala albeola", "^ot:ottId": 654820, "^ot:ottTaxonName": "Bucephala albeola"}, "otu426759": {"^ot:originalLabel": "Melanitta nigra", "^ot:ottId": 948668, "^ot:ottTaxonName": "Melanitta nigra"}, "otu426760": {"^ot:originalLabel": "Melanitta perspicillata", "^ot:ottId": 972536, "^ot:ottTaxonName": "Melanitta perspicillata"}, "otu426761": {"^ot:originalLabel": "Somateria mollissima", "^ot:ottId": 785961, "^ot:ottTaxonName": "Somateria mollissima"}, "otu426762": {"^ot:originalLabel": "Somateria spectabilis", "^ot:ottId": 633262, "^ot:ottTaxonName": "Somateria spectabilis"}, "otu426763": {"^ot:originalLabel": "Clangula hyemalis", "^ot:ottId": 316879, "^ot:ottTaxonName": "Clangula hyemalis"}, "otu426764": {"^ot:originalLabel": "Anser albifrons", "^ot:ottId": 430239, "^ot:ottTaxonName": "Anser albifrons"}, "otu426765": {"^ot:originalLabel": "Anser erythropus", "^ot:ottId": 691333, "^ot:ottTaxonName": "Anser erythropus"}, "otu426766": {"^ot:originalLabel": "Anser fabalis", "^ot:ottId": 325140, "^ot:ottTaxonName": "Anser fabalis"}, "otu426767": {"^ot:originalLabel": "Anser anser", "^ot:ottId": 190887, "^ot:ottTaxonName": "Anser anser"}, "otu426768": {"^ot:originalLabel": "Anser cygnoides", "^ot:ottId": 190892, "^ot:ottTaxonName": "Anser cygnoides"}, "otu426769": {"^ot:originalLabel": "Anser brachyrhynchus", "^ot:ottId": 970372, "^ot:ottTaxonName": "Anser brachyrhynchus"}, "otu426770": {"^ot:originalLabel": "Anser indicus", "^ot:ottId": 190897, "^ot:ottTaxonName": "Anser indicus"}, "otu426771": {"^ot:originalLabel": "Anser rossii", "^ot:ottId": 767830, "^ot:ottTaxonName": "Anser rossii"}, "otu426772": {"^ot:originalLabel": "Anser canagicus", "^ot:ottId": 166688, "^ot:ottTaxonName": "Anser canagica"}, "otu426773": {"^ot:originalLabel": "Branta canadensis", "^ot:ottId": 714461, "^ot:ottTaxonName": "Branta canadensis"}, "otu426774": {"^ot:originalLabel": "Branta sandvicensis", "^ot:ottId": 767835, "^ot:ottTaxonName": "Branta sandvicensis"}, "otu426775": {"^ot:originalLabel": "Branta leucopsis", "^ot:ottId": 799124, "^ot:ottTaxonName": "Branta leucopsis"}, "otu426776": {"^ot:originalLabel": "Branta ruficollis", "^ot:ottId": 799106, "^ot:ottTaxonName": "Branta ruficollis"}, "otu426777": {"^ot:originalLabel": "Branta bernicla", "^ot:ottId": 135287, "^ot:ottTaxonName": "Branta bernicla"}, "otu426778": {"^ot:originalLabel": "Cygnus atratus", "^ot:ottId": 140312, "^ot:ottTaxonName": "Cygnus atratus"}, "otu426779": {"^ot:originalLabel": "Cygnus olor", "^ot:ottId": 140314, "^ot:ottTaxonName": "Cygnus olor"}, "otu426780": {"^ot:originalLabel": "Cygnus columbianus", "^ot:ottId": 207360, "^ot:ottTaxonName": "Cygnus columbianus"}, "otu426781": {"^ot:originalLabel": "Cygnus cygnus", "^ot:ottId": 817994, "^ot:ottTaxonName": "Cygnus cygnus"}, "otu426782": {"^ot:originalLabel": "Cygnus melanocoryphus", "^ot:ottId": 318892, "^ot:ottTaxonName": "Cygnus melancoryphus"}, "otu426783": {"^ot:originalLabel": "Cereopsis novaehollandiae", "^ot:ottId": 714459, "^ot:ottTaxonName": "Cereopsis novaehollandiae"}, "otu426784": {"^ot:originalLabel": "Coscoroba coscoroba", "^ot:ottId": 140305, "^ot:ottTaxonName": "Coscoroba coscoroba"}, "otu426785": {"^ot:originalLabel": "Malacorhynchus membranaceus", "^ot:ottId": 1082830, "^ot:ottTaxonName": "Malacorhynchus membranaceus"}, "otu426786": {"^ot:originalLabel": "Oxyura australis", "^ot:ottId": 432044, "^ot:ottTaxonName": "Oxyura australis"}, "otu426787": {"^ot:originalLabel": "Oxyura maccoa", "^ot:ottId": 579110, "^ot:ottTaxonName": "Oxyura maccoa"}, "otu426788": {"^ot:originalLabel": "Oxyura jamaicensis", "^ot:ottId": 88378, "^ot:ottTaxonName": "Oxyura jamaicensis"}, "otu426789": {"^ot:originalLabel": "Oxyura vittata", "^ot:ottId": 88380, "^ot:ottTaxonName": "Oxyura vittata"}, "otu426790": {"^ot:originalLabel": "Oxyura leucocephala", "^ot:ottId": 579099, "^ot:ottTaxonName": "Oxyura leucocephala"}, "otu426791": {"^ot:originalLabel": "Nomonyx dominicus", "^ot:ottId": 892281, "^ot:ottTaxonName": "Nomonyx dominica"}, "otu426792": {"^ot:originalLabel": "Biziura lobata", "^ot:ottId": 432041, "^ot:ottTaxonName": "Biziura lobata"}, "otu426793": {"^ot:originalLabel": "Dendrocygna bicolor", "^ot:ottId": 662618, "^ot:ottTaxonName": "Dendrocygna bicolor"}, "otu426794": {"^ot:originalLabel": "Dendrocygna javanica", "^ot:ottId": 737604, "^ot:ottTaxonName": "Dendrocygna javanica"}, "otu426795": {"^ot:originalLabel": "Dendrocygna eytoni", "^ot:ottId": 662615, "^ot:ottTaxonName": "Dendrocygna eytoni"}, "otu426796": {"^ot:originalLabel": "Dendrocygna viduata", "^ot:ottId": 662622, "^ot:ottTaxonName": "Dendrocygna viduata"}, "otu426797": {"^ot:originalLabel": "Anseranas semipalmata", "^ot:ottId": 714464, "^ot:ottTaxonName": "Anseranas semipalmata"}, "otu426798": {"^ot:originalLabel": "Chauna torquata", "^ot:ottId": 860132, "^ot:ottTaxonName": "Chauna torquata"}, "otu426799": {"^ot:originalLabel": "Anhima cornuta", "^ot:ottId": 767829, "^ot:ottTaxonName": "Anhima cornuta"}, "otu426800": {"^ot:originalLabel": "Megapodius eremita", "^ot:ottId": 570964, "^ot:ottTaxonName": "Megapodius eremita"}, "otu426801": {"^ot:originalLabel": "Gallus gallus", "^ot:ottId": 153563, "^ot:ottTaxonName": "Gallus gallus"}, "otu426802": {"^ot:originalLabel": "Rhea americana", "^ot:ottId": 857864, "^ot:ottTaxonName": "Rhea americana"}, "otu426803": {"^ot:originalLabel": "Apteryx haastii", "^ot:ottId": 241836, "^ot:ottTaxonName": "Apteryx haastii"}}}}, "treesById": {"trees2866": {"@otus": "otus2866", "^ot:treeElementOrder": ["tree6656"], "treeById": {"tree6656": {"@label": "Fig. 1 Bayesian topology", "@xsi:type": "nex:FloatTree", "^ot:branchLengthDescription": "", "^ot:branchLengthMode": "", "^ot:branchLengthTimeUnit": "", "^ot:curatedType": "Bayesian inference ", "^ot:inGroupClade": "node1160946", "^ot:nodeLabelMode": "", "^ot:nodeLabelTimeUnit": "", "^ot:outGroupEdge": "", "^ot:reasonsToExcludeFromSynthesis": [], "^ot:rootNodeId": "node1160944", "^ot:specifiedRoot": "node1160944", "^ot:tag": [], "^ot:unrootedTree": false, "edgeBySourceId": {"node1160944": {"edge1160945": {"@source": "node1160944", "@target": "node1160945"}, "edge1161190": {"@source": "node1160944", "@target": "node1161190"}}, "node1160945": {"edge1160946": {"@source": "node1160945", "@target": "node1160946"}, "edge1161187": {"@source": "node1160945", "@target": "node1161187"}}, "node1160946": {"edge1160947": {"@source": "node1160946", "@target": "node1160947"}, "edge1161184": {"@source": "node1160946", "@target": "node1161184"}}, "node1160947": {"edge1160948": {"@source": "node1160947", "@target": "node1160948"}, "edge1161183": {"@source": "node1160947", "@target": "node1161183"}}, "node1160948": {"edge1160949": {"@source": "node1160948", "@target": "node1160949"}, "edge1161176": {"@source": "node1160948", "@target": "node1161176"}}, "node1160949": {"edge1160950": {"@source": "node1160949", "@target": "node1160950"}, "edge1161119": {"@source": "node1160949", "@target": "node1161119"}}, "node1160950": {"edge1160951": {"@source": "node1160950", "@target": "node1160951"}, "edge1161096": {"@source": "node1160950", "@target": "node1161096"}}, "node1160951": {"edge1160952": {"@source": "node1160951", "@target": "node1160952"}, "edge1161075": {"@source": "node1160951", "@target": "node1161075"}}, "node1160952": {"edge1160953": {"@source": "node1160952", "@target": "node1160953"}, "edge1161074": {"@source": "node1160952", "@target": "node1161074"}}, "node1160953": {"edge1160954": {"@source": "node1160953", "@target": "node1160954"}, "edge1161045": {"@source": "node1160953", "@target": "node1161045"}}, "node1160954": {"edge1160955": {"@source": "node1160954", "@target": "node1160955"}, "edge1161014": {"@source": "node1160954", "@target": "node1161014"}}, "node1160955": {"edge1160956": {"@source": "node1160955", "@target": "node1160956"}, "edge1161005": {"@source": "node1160955", "@target": "node1161005"}}, "node1160956": {"edge1160957": {"@source": "node1160956", "@target": "node1160957"}, "edge1160984": {"@source": "node1160956", "@target": "node1160984"}}, "node1160957": {"edge1160958": {"@source": "node1160957", "@target": "node1160958"}, "edge1160975": {"@source": "node1160957", "@target": "node1160975"}}, "node1160958": {"edge1160959": {"@source": "node1160958", "@target": "node1160959"}, "edge1160968": {"@source": "node1160958", "@target": "node1160968"}}, "node1160959": {"edge1160960": {"@source": "node1160959", "@target": "node1160960"}, "edge1160965": {"@source": "node1160959", "@target": "node1160965"}}, "node1160960": {"edge1160961": {"@source": "node1160960", "@target": "node1160961"}, "edge1160964": {"@source": "node1160960", "@target": "node1160964"}}, "node1160961": {"edge1160962": {"@source": "node1160961", "@target": "node1160962"}, "edge1160963": {"@source": "node1160961", "@target": "node1160963"}}, "node1160965": {"edge1160966": {"@source": "node1160965", "@target": "node1160966"}, "edge1160967": {"@source": "node1160965", "@target": "node1160967"}}, "node1160968": {"edge1160969": {"@source": "node1160968", "@target": "node1160969"}, "edge1160974": {"@source": "node1160968", "@target": "node1160974"}}, "node1160969": {"edge1160970": {"@source": "node1160969", "@target": "node1160970"}, "edge1160973": {"@source": "node1160969", "@target": "node1160973"}}, "node1160970": {"edge1160971": {"@source": "node1160970", "@target": "node1160971"}, "edge1160972": {"@source": "node1160970", "@target": "node1160972"}}, "node1160975": {"edge1160976": {"@source": "node1160975", "@target": "node1160976"}, "edge1160983": {"@source": "node1160975", "@target": "node1160983"}}, "node1160976": {"edge1160977": {"@source": "node1160976", "@target": "node1160977"}, "edge1160982": {"@source": "node1160976", "@target": "node1160982"}}, "node1160977": {"edge1160978": {"@source": "node1160977", "@target": "node1160978"}, "edge1160981": {"@source": "node1160977", "@target": "node1160981"}}, "node1160978": {"edge1160979": {"@source": "node1160978", "@target": "node1160979"}, "edge1160980": {"@source": "node1160978", "@target": "node1160980"}}, "node1160984": {"edge1160985": {"@source": "node1160984", "@target": "node1160985"}, "edge1161004": {"@source": "node1160984", "@target": "node1161004"}}, "node1160985": {"edge1160986": {"@source": "node1160985", "@target": "node1160986"}, "edge1161003": {"@source": "node1160985", "@target": "node1161003"}}, "node1160986": {"edge1160987": {"@source": "node1160986", "@target": "node1160987"}, "edge1161002": {"@source": "node1160986", "@target": "node1161002"}}, "node1160987": {"edge1160988": {"@source": "node1160987", "@target": "node1160988"}, "edge1161001": {"@source": "node1160987", "@target": "node1161001"}}, "node1160988": {"edge1160989": {"@source": "node1160988", "@target": "node1160989"}, "edge1161000": {"@source": "node1160988", "@target": "node1161000"}}, "node1160989": {"edge1160990": {"@source": "node1160989", "@target": "node1160990"}, "edge1160999": {"@source": "node1160989", "@target": "node1160999"}}, "node1160990": {"edge1160991": {"@source": "node1160990", "@target": "node1160991"}, "edge1160998": {"@source": "node1160990", "@target": "node1160998"}}, "node1160991": {"edge1160992": {"@source": "node1160991", "@target": "node1160992"}, "edge1160997": {"@source": "node1160991", "@target": "node1160997"}}, "node1160992": {"edge1160993": {"@source": "node1160992", "@target": "node1160993"}, "edge1160996": {"@source": "node1160992", "@target": "node1160996"}}, "node1160993": {"edge1160994": {"@source": "node1160993", "@target": "node1160994"}, "edge1160995": {"@source": "node1160993", "@target": "node1160995"}}, "node1161005": {"edge1161006": {"@source": "node1161005", "@target": "node1161006"}, "edge1161011": {"@source": "node1161005", "@target": "node1161011"}}, "node1161006": {"edge1161007": {"@source": "node1161006", "@target": "node1161007"}, "edge1161010": {"@source": "node1161006", "@target": "node1161010"}}, "node1161007": {"edge1161008": {"@source": "node1161007", "@target": "node1161008"}, "edge1161009": {"@source": "node1161007", "@target": "node1161009"}}, "node1161011": {"edge1161012": {"@source": "node1161011", "@target": "node1161012"}, "edge1161013": {"@source": "node1161011", "@target": "node1161013"}}, "node1161014": {"edge1161015": {"@source": "node1161014", "@target": "node1161015"}, "edge1161038": {"@source": "node1161014", "@target": "node1161038"}}, "node1161015": {"edge1161016": {"@source": "node1161015", "@target": "node1161016"}, "edge1161037": {"@source": "node1161015", "@target": "node1161037"}}, "node1161016": {"edge1161017": {"@source": "node1161016", "@target": "node1161017"}, "edge1161030": {"@source": "node1161016", "@target": "node1161030"}}, "node1161017": {"edge1161018": {"@source": "node1161017", "@target": "node1161018"}, "edge1161029": {"@source": "node1161017", "@target": "node1161029"}}, "node1161018": {"edge1161019": {"@source": "node1161018", "@target": "node1161019"}, "edge1161024": {"@source": "node1161018", "@target": "node1161024"}}, "node1161019": {"edge1161020": {"@source": "node1161019", "@target": "node1161020"}, "edge1161023": {"@source": "node1161019", "@target": "node1161023"}}, "node1161020": {"edge1161021": {"@source": "node1161020", "@target": "node1161021"}, "edge1161022": {"@source": "node1161020", "@target": "node1161022"}}, "node1161024": {"edge1161025": {"@source": "node1161024", "@target": "node1161025"}, "edge1161028": {"@source": "node1161024", "@target": "node1161028"}}, "node1161025": {"edge1161026": {"@source": "node1161025", "@target": "node1161026"}, "edge1161027": {"@source": "node1161025", "@target": "node1161027"}}, "node1161030": {"edge1161031": {"@source": "node1161030", "@target": "node1161031"}, "edge1161036": {"@source": "node1161030", "@target": "node1161036"}}, "node1161031": {"edge1161032": {"@source": "node1161031", "@target": "node1161032"}, "edge1161035": {"@source": "node1161031", "@target": "node1161035"}}, "node1161032": {"edge1161033": {"@source": "node1161032", "@target": "node1161033"}, "edge1161034": {"@source": "node1161032", "@target": "node1161034"}}, "node1161038": {"edge1161039": {"@source": "node1161038", "@target": "node1161039"}, "edge1161044": {"@source": "node1161038", "@target": "node1161044"}}, "node1161039": {"edge1161040": {"@source": "node1161039", "@target": "node1161040"}, "edge1161043": {"@source": "node1161039", "@target": "node1161043"}}, "node1161040": {"edge1161041": {"@source": "node1161040", "@target": "node1161041"}, "edge1161042": {"@source": "node1161040", "@target": "node1161042"}}, "node1161045": {"edge1161046": {"@source": "node1161045", "@target": "node1161046"}, "edge1161071": {"@source": "node1161045", "@target": "node1161071"}}, "node1161046": {"edge1161047": {"@source": "node1161046", "@target": "node1161047"}, "edge1161068": {"@source": "node1161046", "@target": "node1161068"}}, "node1161047": {"edge1161048": {"@source": "node1161047", "@target": "node1161048"}, "edge1161067": {"@source": "node1161047", "@target": "node1161067"}}, "node1161048": {"edge1161049": {"@source": "node1161048", "@target": "node1161049"}, "edge1161066": {"@source": "node1161048", "@target": "node1161066"}}, "node1161049": {"edge1161050": {"@source": "node1161049", "@target": "node1161050"}, "edge1161065": {"@source": "node1161049", "@target": "node1161065"}}, "node1161050": {"edge1161051": {"@source": "node1161050", "@target": "node1161051"}, "edge1161064": {"@source": "node1161050", "@target": "node1161064"}}, "node1161051": {"edge1161052": {"@source": "node1161051", "@target": "node1161052"}, "edge1161061": {"@source": "node1161051", "@target": "node1161061"}}, "node1161052": {"edge1161053": {"@source": "node1161052", "@target": "node1161053"}, "edge1161058": {"@source": "node1161052", "@target": "node1161058"}}, "node1161053": {"edge1161054": {"@source": "node1161053", "@target": "node1161054"}, "edge1161057": {"@source": "node1161053", "@target": "node1161057"}}, "node1161054": {"edge1161055": {"@source": "node1161054", "@target": "node1161055"}, "edge1161056": {"@source": "node1161054", "@target": "node1161056"}}, "node1161058": {"edge1161059": {"@source": "node1161058", "@target": "node1161059"}, "edge1161060": {"@source": "node1161058", "@target": "node1161060"}}, "node1161061": {"edge1161062": {"@source": "node1161061", "@target": "node1161062"}, "edge1161063": {"@source": "node1161061", "@target": "node1161063"}}, "node1161068": {"edge1161069": {"@source": "node1161068", "@target": "node1161069"}, "edge1161070": {"@source": "node1161068", "@target": "node1161070"}}, "node1161071": {"edge1161072": {"@source": "node1161071", "@target": "node1161072"}, "edge1161073": {"@source": "node1161071", "@target": "node1161073"}}, "node1161075": {"edge1161076": {"@source": "node1161075", "@target": "node1161076"}, "edge1161091": {"@source": "node1161075", "@target": "node1161091"}}, "node1161076": {"edge1161077": {"@source": "node1161076", "@target": "node1161077"}, "edge1161088": {"@source": "node1161076", "@target": "node1161088"}}, "node1161077": {"edge1161078": {"@source": "node1161077", "@target": "node1161078"}, "edge1161087": {"@source": "node1161077", "@target": "node1161087"}}, "node1161078": {"edge1161079": {"@source": "node1161078", "@target": "node1161079"}, "edge1161086": {"@source": "node1161078", "@target": "node1161086"}}, "node1161079": {"edge1161080": {"@source": "node1161079", "@target": "node1161080"}, "edge1161085": {"@source": "node1161079", "@target": "node1161085"}}, "node1161080": {"edge1161081": {"@source": "node1161080", "@target": "node1161081"}, "edge1161084": {"@source": "node1161080", "@target": "node1161084"}}, "node1161081": {"edge1161082": {"@source": "node1161081", "@target": "node1161082"}, "edge1161083": {"@source": "node1161081", "@target": "node1161083"}}, "node1161088": {"edge1161089": {"@source": "node1161088", "@target": "node1161089"}, "edge1161090": {"@source": "node1161088", "@target": "node1161090"}}, "node1161091": {"edge1161092": {"@source": "node1161091", "@target": "node1161092"}, "edge1161095": {"@source": "node1161091", "@target": "node1161095"}}, "node1161092": {"edge1161093": {"@source": "node1161092", "@target": "node1161093"}, "edge1161094": {"@source": "node1161092", "@target": "node1161094"}}, "node1161096": {"edge1161097": {"@source": "node1161096", "@target": "node1161097"}, "edge1161118": {"@source": "node1161096", "@target": "node1161118"}}, "node1161097": {"edge1161098": {"@source": "node1161097", "@target": "node1161098"}, "edge1161115": {"@source": "node1161097", "@target": "node1161115"}}, "node1161098": {"edge1161099": {"@source": "node1161098", "@target": "node1161099"}, "edge1161112": {"@source": "node1161098", "@target": "node1161112"}}, "node1161099": {"edge1161100": {"@source": "node1161099", "@target": "node1161100"}, "edge1161107": {"@source": "node1161099", "@target": "node1161107"}}, "node1161100": {"edge1161101": {"@source": "node1161100", "@target": "node1161101"}, "edge1161106": {"@source": "node1161100", "@target": "node1161106"}}, "node1161101": {"edge1161102": {"@source": "node1161101", "@target": "node1161102"}, "edge1161105": {"@source": "node1161101", "@target": "node1161105"}}, "node1161102": {"edge1161103": {"@source": "node1161102", "@target": "node1161103"}, "edge1161104": {"@source": "node1161102", "@target": "node1161104"}}, "node1161107": {"edge1161108": {"@source": "node1161107", "@target": "node1161108"}, "edge1161111": {"@source": "node1161107", "@target": "node1161111"}}, "node1161108": {"edge1161109": {"@source": "node1161108", "@target": "node1161109"}, "edge1161110": {"@source": "node1161108", "@target": "node1161110"}}, "node1161112": {"edge1161113": {"@source": "node1161112", "@target": "node1161113"}, "edge1161114": {"@source": "node1161112", "@target": "node1161114"}}, "node1161115": {"edge1161116": {"@source": "node1161115", "@target": "node1161116"}, "edge1161117": {"@source": "node1161115", "@target": "node1161117"}}, "node1161119": {"edge1161120": {"@source": "node1161119", "@target": "node1161120"}, "edge1161175": {"@source": "node1161119", "@target": "node1161175"}}, "node1161120": {"edge1161121": {"@source": "node1161120", "@target": "node1161121"}, "edge1161164": {"@source": "node1161120", "@target": "node1161164"}}, "node1161121": {"edge1161122": {"@source": "node1161121", "@target": "node1161122"}, "edge1161163": {"@source": "node1161121", "@target": "node1161163"}}, "node1161122": {"edge1161123": {"@source": "node1161122", "@target": "node1161123"}, "edge1161160": {"@source": "node1161122", "@target": "node1161160"}}, "node1161123": {"edge1161124": {"@source": "node1161123", "@target": "node1161124"}, "edge1161151": {"@source": "node1161123", "@target": "node1161151"}}, "node1161124": {"edge1161125": {"@source": "node1161124", "@target": "node1161125"}, "edge1161142": {"@source": "node1161124", "@target": "node1161142"}}, "node1161125": {"edge1161126": {"@source": "node1161125", "@target": "node1161126"}, "edge1161141": {"@source": "node1161125", "@target": "node1161141"}}, "node1161126": {"edge1161127": {"@source": "node1161126", "@target": "node1161127"}, "edge1161140": {"@source": "node1161126", "@target": "node1161140"}}, "node1161127": {"edge1161128": {"@source": "node1161127", "@target": "node1161128"}, "edge1161139": {"@source": "node1161127", "@target": "node1161139"}}, "node1161128": {"edge1161129": {"@source": "node1161128", "@target": "node1161129"}, "edge1161138": {"@source": "node1161128", "@target": "node1161138"}}, "node1161129": {"edge1161130": {"@source": "node1161129", "@target": "node1161130"}, "edge1161135": {"@source": "node1161129", "@target": "node1161135"}}, "node1161130": {"edge1161131": {"@source": "node1161130", "@target": "node1161131"}, "edge1161134": {"@source": "node1161130", "@target": "node1161134"}}, "node1161131": {"edge1161132": {"@source": "node1161131", "@target": "node1161132"}, "edge1161133": {"@source": "node1161131", "@target": "node1161133"}}, "node1161135": {"edge1161136": {"@source": "node1161135", "@target": "node1161136"}, "edge1161137": {"@source": "node1161135", "@target": "node1161137"}}, "node1161142": {"edge1161143": {"@source": "node1161142", "@target": "node1161143"}, "edge1161150": {"@source": "node1161142", "@target": "node1161150"}}, "node1161143": {"edge1161144": {"@source": "node1161143", "@target": "node1161144"}, "edge1161149": {"@source": "node1161143", "@target": "node1161149"}}, "node1161144": {"edge1161145": {"@source": "node1161144", "@target": "node1161145"}, "edge1161148": {"@source": "node1161144", "@target": "node1161148"}}, "node1161145": {"edge1161146": {"@source": "node1161145", "@target": "node1161146"}, "edge1161147": {"@source": "node1161145", "@target": "node1161147"}}, "node1161151": {"edge1161152": {"@source": "node1161151", "@target": "node1161152"}, "edge1161159": {"@source": "node1161151", "@target": "node1161159"}}, "node1161152": {"edge1161153": {"@source": "node1161152", "@target": "node1161153"}, "edge1161156": {"@source": "node1161152", "@target": "node1161156"}}, "node1161153": {"edge1161154": {"@source": "node1161153", "@target": "node1161154"}, "edge1161155": {"@source": "node1161153", "@target": "node1161155"}}, "node1161156": {"edge1161157": {"@source": "node1161156", "@target": "node1161157"}, "edge1161158": {"@source": "node1161156", "@target": "node1161158"}}, "node1161160": {"edge1161161": {"@source": "node1161160", "@target": "node1161161"}, "edge1161162": {"@source": "node1161160", "@target": "node1161162"}}, "node1161164": {"edge1161165": {"@source": "node1161164", "@target": "node1161165"}, "edge1161174": {"@source": "node1161164", "@target": "node1161174"}}, "node1161165": {"edge1161166": {"@source": "node1161165", "@target": "node1161166"}, "edge1161173": {"@source": "node1161165", "@target": "node1161173"}}, "node1161166": {"edge1161167": {"@source": "node1161166", "@target": "node1161167"}, "edge1161170": {"@source": "node1161166", "@target": "node1161170"}}, "node1161167": {"edge1161168": {"@source": "node1161167", "@target": "node1161168"}, "edge1161169": {"@source": "node1161167", "@target": "node1161169"}}, "node1161170": {"edge1161171": {"@source": "node1161170", "@target": "node1161171"}, "edge1161172": {"@source": "node1161170", "@target": "node1161172"}}, "node1161176": {"edge1161177": {"@source": "node1161176", "@target": "node1161177"}, "edge1161182": {"@source": "node1161176", "@target": "node1161182"}}, "node1161177": {"edge1161178": {"@source": "node1161177", "@target": "node1161178"}, "edge1161181": {"@source": "node1161177", "@target": "node1161181"}}, "node1161178": {"edge1161179": {"@source": "node1161178", "@target": "node1161179"}, "edge1161180": {"@source": "node1161178", "@target": "node1161180"}}, "node1161184": {"edge1161185": {"@source": "node1161184", "@target": "node1161185"}, "edge1161186": {"@source": "node1161184", "@target": "node1161186"}}, "node1161187": {"edge1161188": {"@source": "node1161187", "@target": "node1161188"}, "edge1161189": {"@source": "node1161187", "@target": "node1161189"}}, "node1161190": {"edge1161191": {"@source": "node1161190", "@target": "node1161191"}, "edge1161192": {"@source": "node1161190", "@target": "node1161192"}}}, "nodeById": {"node1160944": {"@root": true}, "node1160945": {}, "node1160946": {}, "node1160947": {}, "node1160948": {}, "node1160949": {}, "node1160950": {}, "node1160951": {}, "node1160952": {}, "node1160953": {}, "node1160954": {}, "node1160955": {}, "node1160956": {}, "node1160957": {}, "node1160958": {}, "node1160959": {}, "node1160960": {}, "node1160961": {}, "node1160962": {"@otu": "otu426679"}, "node1160963": {"@otu": "otu426680"}, "node1160964": {"@otu": "otu426681"}, "node1160965": {}, "node1160966": {"@otu": "otu426682"}, "node1160967": {"@otu": "otu426683"}, "node1160968": {}, "node1160969": {}, "node1160970": {}, "node1160971": {"@otu": "otu426684"}, "node1160972": {"@otu": "otu426685"}, "node1160973": {"@otu": "otu426686"}, "node1160974": {"@otu": "otu426687"}, "node1160975": {}, "node1160976": {}, "node1160977": {}, "node1160978": {}, "node1160979": {"@otu": "otu426688"}, "node1160980": {"@otu": "otu426689"}, "node1160981": {"@otu": "otu426690"}, "node1160982": {"@otu": "otu426691"}, "node1160983": {"@otu": "otu426692"}, "node1160984": {}, "node1160985": {}, "node1160986": {}, "node1160987": {}, "node1160988": {}, "node1160989": {}, "node1160990": {}, "node1160991": {}, "node1160992": {}, "node1160993": {}, "node1160994": {"@otu": "otu426693"}, "node1160995": {"@otu": "otu426694"}, "node1160996": {"@otu": "otu426695"}, "node1160997": {"@otu": "otu426696"}, "node1160998": {"@otu": "otu426697"}, "node1160999": {"@otu": "otu426698"}, "node1161000": {"@otu": "otu426699"}, "node1161001": {"@otu": "otu426700"}, "node1161002": {"@otu": "otu426701"}, "node1161003": {"@otu": "otu426702"}, "node1161004": {"@otu": "otu426703"}, "node1161005": {}, "node1161006": {}, "node1161007": {}, "node1161008": {"@otu": "otu426704"}, "node1161009": {"@otu": "otu426705"}, "node1161010": {"@otu": "otu426706"}, "node1161011": {}, "node1161012": {"@otu": "otu426707"}, "node1161013": {"@otu": "otu426708"}, "node1161014": {}, "node1161015": {}, "node1161016": {}, "node1161017": {}, "node1161018": {}, "node1161019": {}, "node1161020": {}, "node1161021": {"@otu": "otu426709"}, "node1161022": {"@otu": "otu426710"}, "node1161023": {"@otu": "otu426711"}, "node1161024": {}, "node1161025": {}, "node1161026": {"@otu": "otu426712"}, "node1161027": {"@otu": "otu426713"}, "node1161028": {"@otu": "otu426714"}, "node1161029": {"@otu": "otu426715"}, "node1161030": {}, "node1161031": {}, "node1161032": {}, "node1161033": {"@otu": "otu426716"}, "node1161034": {"@otu": "otu426717"}, "node1161035": {"@otu": "otu426718"}, "node1161036": {"@otu": "otu426719"}, "node1161037": {"@otu": "otu426720"}, "node1161038": {}, "node1161039": {}, "node1161040": {}, "node1161041": {"@otu": "otu426721"}, "node1161042": {"@otu": "otu426722"}, "node1161043": {"@otu": "otu426723"}, "node1161044": {"@otu": "otu426724"}, "node1161045": {}, "node1161046": {}, "node1161047": {}, "node1161048": {}, "node1161049": {}, "node1161050": {}, "node1161051": {}, "node1161052": {}, "node1161053": {}, "node1161054": {}, "node1161055": {"@otu": "otu426725"}, "node1161056": {"@otu": "otu426726"}, "node1161057": {"@otu": "otu426727"}, "node1161058": {}, "node1161059": {"@otu": "otu426728"}, "node1161060": {"@otu": "otu426729"}, "node1161061": {}, "node1161062": {"@otu": "otu426730"}, "node1161063": {"@otu": "otu426731"}, "node1161064": {"@otu": "otu426732"}, "node1161065": {"@otu": "otu426733"}, "node1161066": {"@otu": "otu426734"}, "node1161067": {"@otu": "otu426735"}, "node1161068": {}, "node1161069": {"@otu": "otu426736"}, "node1161070": {"@otu": "otu426737"}, "node1161071": {}, "node1161072": {"@otu": "otu426738"}, "node1161073": {"@otu": "otu426739"}, "node1161074": {"@otu": "otu426740"}, "node1161075": {}, "node1161076": {}, "node1161077": {}, "node1161078": {}, "node1161079": {}, "node1161080": {}, "node1161081": {}, "node1161082": {"@otu": "otu426741"}, "node1161083": {"@otu": "otu426742"}, "node1161084": {"@otu": "otu426743"}, "node1161085": {"@otu": "otu426744"}, "node1161086": {"@otu": "otu426745"}, "node1161087": {"@otu": "otu426746"}, "node1161088": {}, "node1161089": {"@otu": "otu426747"}, "node1161090": {"@otu": "otu426748"}, "node1161091": {}, "node1161092": {}, "node1161093": {"@otu": "otu426749"}, "node1161094": {"@otu": "otu426750"}, "node1161095": {"@otu": "otu426751"}, "node1161096": {}, "node1161097": {}, "node1161098": {}, "node1161099": {}, "node1161100": {}, "node1161101": {}, "node1161102": {}, "node1161103": {"@otu": "otu426752"}, "node1161104": {"@otu": "otu426753"}, "node1161105": {"@otu": "otu426754"}, "node1161106": {"@otu": "otu426755"}, "node1161107": {}, "node1161108": {}, "node1161109": {"@otu": "otu426756"}, "node1161110": {"@otu": "otu426757"}, "node1161111": {"@otu": "otu426758"}, "node1161112": {}, "node1161113": {"@otu": "otu426759"}, "node1161114": {"@otu": "otu426760"}, "node1161115": {}, "node1161116": {"@otu": "otu426761"}, "node1161117": {"@otu": "otu426762"}, "node1161118": {"@otu": "otu426763"}, "node1161119": {}, "node1161120": {}, "node1161121": {}, "node1161122": {}, "node1161123": {}, "node1161124": {}, "node1161125": {}, "node1161126": {}, "node1161127": {}, "node1161128": {}, "node1161129": {}, "node1161130": {}, "node1161131": {}, "node1161132": {"@otu": "otu426764"}, "node1161133": {"@otu": "otu426765"}, "node1161134": {"@otu": "otu426766"}, "node1161135": {}, "node1161136": {"@otu": "otu426767"}, "node1161137": {"@otu": "otu426768"}, "node1161138": {"@otu": "otu426769"}, "node1161139": {"@otu": "otu426770"}, "node1161140": {"@otu": "otu426771"}, "node1161141": {"@otu": "otu426772"}, "node1161142": {}, "node1161143": {}, "node1161144": {}, "node1161145": {}, "node1161146": {"@otu": "otu426773"}, "node1161147": {"@otu": "otu426774"}, "node1161148": {"@otu": "otu426775"}, "node1161149": {"@otu": "otu426776"}, "node1161150": {"@otu": "otu426777"}, "node1161151": {}, "node1161152": {}, "node1161153": {}, "node1161154": {"@otu": "otu426778"}, "node1161155": {"@otu": "otu426779"}, "node1161156": {}, "node1161157": {"@otu": "otu426780"}, "node1161158": {"@otu": "otu426781"}, "node1161159": {"@otu": "otu426782"}, "node1161160": {}, "node1161161": {"@otu": "otu426783"}, "node1161162": {"@otu": "otu426784"}, "node1161163": {"@otu": "otu426785"}, "node1161164": {}, "node1161165": {}, "node1161166": {}, "node1161167": {}, "node1161168": {"@otu": "otu426786"}, "node1161169": {"@otu": "otu426787"}, "node1161170": {}, "node1161171": {"@otu": "otu426788"}, "node1161172": {"@otu": "otu426789"}, "node1161173": {"@otu": "otu426790"}, "node1161174": {"@otu": "otu426791"}, "node1161175": {"@otu": "otu426792"}, "node1161176": {}, "node1161177": {}, "node1161178": {}, "node1161179": {"@otu": "otu426793"}, "node1161180": {"@otu": "otu426794"}, "node1161181": {"@otu": "otu426795"}, "node1161182": {"@otu": "otu426796"}, "node1161183": {"@otu": "otu426797"}, "node1161184": {}, "node1161185": {"@otu": "otu426798"}, "node1161186": {"@otu": "otu426799"}, "node1161187": {}, "node1161188": {"@otu": "otu426800"}, "node1161189": {"@otu": "otu426801"}, "node1161190": {}, "node1161191": {"@otu": "otu426802"}, "node1161192": {"@otu": "otu426803"}}}}}}}}, "branch2sha": {"master": "19ec8a2da4b35c55075f155f9fb4d01281774fe5"}, "commentHTML": "", "duplicateStudyIDs": [], "shardName": "phylesystem-1", "versionHistory": [{"id": "dca5deac5dbeb8e49635c1f5b075775200fbfb29", "author_name": "jwaterford", "author_email": "jwaterford@ucsd.edu", "date": "Mon, 5 Jun 2023 18:31:31 +0000", "date_ISO_8601": "2023-06-05 18:31:31 +0000", "relative_date": "2 years, 11 months ago", "message_subject": "Mapped tips to CLO taxa", "message_body": "(Update document 'pg_2866' via OpenTree API)"}, {"id": "94234d932bceee4b0a6cc3c8f175312e9976097a", "author_name": "Joseph W. Brown", "author_email": "ANONYMOUS", "date": "Tue, 1 Jul 2014 17:52:02 +0100", "date_ISO_8601": "2014-07-01 17:52:02 +0100", "relative_date": "12 years ago", "message_subject": "fix tree name", "message_body": "(Update Study #pg_2866 via OpenTree API)"}, {"id": "d33fb39501605772a074dffc82affa5344ea9a94", "author_name": "Mark T. Holder", "author_email": "mtholder@gmail.com", "date": "Wed, 11 Jun 2014 22:18:34 -0500", "date_ISO_8601": "2014-06-11 22:18:34 -0500", "relative_date": "12 years ago", "message_subject": "corrected study ids"}, {"id": "f8a738aeda20a73750847484e110a85c7a3e0a12", "author_name": "Mark T. Holder", "author_email": "mtholder@gmail.com", "date": "Tue, 10 Jun 2014 23:36:42 -0500", "date_ISO_8601": "2014-06-10 23:36:42 -0500", "relative_date": "12 years ago", "message_subject": "Migrating info from gcmdr to nexsons", "message_body": "using peyotl d69c8b180fce7703c7203a0b51712eab57e2988c\ndev/decorate_pg_studies_with_gcmdr_info.py\nto set:\n  ^ot:candidateTreeForSynthesis\n  ^ot:specifiedRoot, and\n  ^ot:unrootedTree\nproperties based on the use of the trees for synthesis study\nlists in gcmdr commit 35bf307e72bed4f59724762dde4a12965abcea92"}, {"id": "593d6fbab385716dc0a12f3fc95133e8b7479b37", "author_name": "Mark T. Holder", "author_email": "mtholder@gmail.com", "date": "Tue, 29 Apr 2014 20:05:19 -0500", "date_ISO_8601": "2014-04-29 20:05:19 -0500", "relative_date": "12 years ago", "message_subject": "initial commit with phylografter files from 29 Apr, 2014"}]}