{"sha": "19ec8a2da4b35c55075f155f9fb4d01281774fe5", "data": {"nexml": {"@generator": "Phylografter nexml-json exporter", "@id": "study", "@nexml2json": "1.2.1", "@nexmljson": "http://purl.org/opentree/nexson", "@version": "0.9", "@xmlns": {"$": "http://www.nexml.org/2009", "nex": "http://www.nexml.org/2009", "ot": "http://purl.org/opentree-terms#", "xsd": "http://www.w3.org/2001/XMLSchema#", "xsi": "http://www.w3.org/2001/XMLSchema-instance"}, "^ot:agents": {"agent": [{"@description": "validator of NexSON constraints as well as constraints that would allow a study to be imported into the Open Tree of Life's phylogenetic synthesis tools", "@id": "peyotl-validator", "@name": "validate_ot_nexson.py", "@url": "https://github.com/OpenTreeOfLife/peyotl", "@version": "0.0.4a", "invocation": {"commandLine": ["--embed", "--agent-only"], "otherProperty": [{"name": "pythonVersion", "value": "2.7.5+"}, {"name": "pythonImplementation", "value": "CPython"}]}}]}, "^ot:annotationEvents": {"annotation": [{"@id": "peyotl-validator-event", "@description": "Open Tree NexSON validation", "@wasAssociatedWithAgentId": "peyotl-validator", "@passedChecks": true, "@preserve": false, "message": [{"@code": "MISSING_OPTIONAL_KEY", "data": ["^ot:inGroupClade"], "refersTo": {"@top": "trees", "@idref": "tree198", "@treesID": "trees292", "@treeID": "tree198"}, "@severity": "WARNING"}]}]}, "^ot:candidateTreeForSynthesis": ["tree199"], "^ot:curatorName": "bryan drew", "^ot:dataDeposit": {"@href": "http://purl.org/phylo/treebase/phylows/study/TB2:S2253"}, "^ot:focalClade": 39538, "^ot:focalCladeOTTTaxonName": "Papilionoideae", "^ot:messages": {"message": []}, "^ot:otusElementOrder": ["otus292"], "^ot:studyId": "pg_292", "^ot:studyPublication": {"@href": "http://dx.doi.org/10.1071/BT08091"}, "^ot:studyPublicationReference": "Sede, S. M., Tosto, D., Talia, P., Luckow, M., Poggio, L., & Fortunato, R. (2009). Phylogenetic relationships among southern South American species of Camptosema, Galactia and Collaea (Diocleinae: Papilionoideae: Leguminosae) on the basis of molecular and morphological data. Australian Journal of Botany, 57(1), 76-86.", "^ot:studyYear": 2009, "^ot:tag": [], "^ot:treesElementOrder": ["trees292"], "otusById": {"otus292": {"otuById": {"otu69382": {"^ot:originalLabel": "Macroptilium psammodes", "^ot:ottId": 513866, "^ot:ottTaxonName": "Macroptilium psammodes"}, "otu69383": {"^ot:originalLabel": "Lupinus paraguariensis", "^ot:ottId": 324955, "^ot:ottTaxonName": "Lupinus paraguariensis"}, "otu69384": {"^ot:originalLabel": "Camptosema paraguariense", "^ot:ottId": 814850, "^ot:ottTaxonName": "Camptosema paraguariense"}, "otu69385": {"^ot:originalLabel": "Camptosema praeandinum", "^ot:ottId": 814852, "^ot:ottTaxonName": "Camptosema praeandinum"}, "otu69386": {"^ot:originalLabel": "Camptosema rubicundum", "^ot:ottId": 1048854, "^ot:ottTaxonName": "Camptosema rubicundum"}, "otu69387": {"^ot:originalLabel": "Camptosema scarlatinum", "^ot:ottId": 344800, "^ot:ottTaxonName": "Camptosema scarlatinum"}, "otu69388": {"^ot:originalLabel": "Collaea cipoensis", "^ot:ottId": 638586, "^ot:ottTaxonName": "Collaea cipoensis"}, "otu69389": {"^ot:originalLabel": "Galactia boavista", "^ot:ottId": 344802, "^ot:ottTaxonName": "Galactia boavista"}, "otu69390": {"^ot:originalLabel": "Galactia marginalis", "^ot:ottId": 442414, "^ot:ottTaxonName": "Galactia marginalis"}, "otu69391": {"^ot:originalLabel": "Galactia martii", "^ot:ottId": 20116, "^ot:ottTaxonName": "Galactia martii"}, "otu69392": {"^ot:originalLabel": "Galactia neesii", "^ot:ottId": 920061, "^ot:ottTaxonName": "Galactia neesii"}, "otu69393": {"^ot:originalLabel": "Galactia benthamiana", "^ot:ottId": 344804, "^ot:ottTaxonName": "Galactia benthamiana"}, "otu69394": {"^ot:originalLabel": "Galactia dubia", "^ot:ottId": 344819, "^ot:ottTaxonName": "Galactia dubia"}, "otu69395": {"^ot:originalLabel": "Galactia fiebrigiana", "^ot:ottId": 344817, "^ot:ottTaxonName": "Galactia fiebrigiana"}, "otu69396": {"^ot:originalLabel": "Galactia latisiliqua", "^ot:ottId": 1027858, "^ot:ottTaxonName": "Galactia latisiliqua"}, "otu69397": {"^ot:originalLabel": "Galactia lindenii", "^ot:ottId": 472369, "^ot:ottTaxonName": "Galactia lindenii"}, "otu69398": {"^ot:originalLabel": "Galactia longifolia", "^ot:ottId": 442378, "^ot:ottTaxonName": "Galactia longifolia"}, "otu69399": {"^ot:originalLabel": "Galactia striata", "^ot:ottId": 1026229, "^ot:ottTaxonName": "Galactia striata"}, "otu69400": {"^ot:originalLabel": "Galactia texana", "^ot:ottId": 301540, "^ot:ottTaxonName": "Galactia texana"}, "otu69401": {"^ot:originalLabel": "Collaea aschersoniana", "^ot:ottId": 344796, "^ot:ottTaxonName": "Collaea aschersoniana"}, "otu69402": {"^ot:originalLabel": "Collaea stenophylla", "^ot:ottId": 472371, "^ot:ottTaxonName": "Collaea stenophylla"}, "otu69403": {"^ot:originalLabel": "Collaea paraguariensis", "^ot:ottId": 344792, "^ot:ottTaxonName": "Collaea paraguariensis"}, "otu69404": {"^ot:originalLabel": "Collaea argentina", "^ot:ottId": 344798, "^ot:ottTaxonName": "Collaea argentina"}, "otu69405": {"^ot:originalLabel": "Camptosema coccineum", "^ot:ottId": 814856, "^ot:ottTaxonName": "Camptosema coccineum"}, "otu69406": {"^ot:originalLabel": "Camptosema coriaceum", "^ot:ottId": 814860, "^ot:ottTaxonName": "Camptosema coriaceum"}, "otu69407": {"^ot:originalLabel": "Austrosteenisia blackii", "^ot:ottId": 807790, "^ot:ottTaxonName": "Austrosteenisia blackii"}, "otu69408": {"^ot:originalLabel": "Millettia grandis", "^ot:ottId": 345234, "^ot:ottTaxonName": "Millettia grandis"}, "otu69409": {"^ot:originalLabel": "Millettia sp", "^ot:ottId": 1046049, "^ot:ottTaxonName": "Millettia sp. Hu 1159"}, "otu69410": {"^ot:originalLabel": "Lonchocarpus rugosus", "^ot:ottId": 437333, "^ot:ottTaxonName": "Lonchocarpus rugosus"}, "otu69411": {"^ot:originalLabel": "Lonchocarpus sp", "^ot:ottId": 519764, "^ot:ottTaxonName": "Lonchocarpus sp. Hu L13"}, "otu69412": {"^ot:originalLabel": "Abrus precatorius", "^ot:ottId": 39530, "^ot:ottTaxonName": "Abrus precatorius"}, "otu69413": {"^ot:originalLabel": "Dioclea bicolor", "^ot:ottId": 730099, "^ot:ottTaxonName": "Dioclea bicolor"}, "otu69414": {"^ot:originalLabel": "Cymbosema roseum", "^ot:ottId": 493194, "^ot:ottTaxonName": "Cymbosema roseum"}, "otu69415": {"^ot:originalLabel": "Cleobulia multiflora", "^ot:ottId": 459939, "^ot:ottTaxonName": "Cleobulia multiflora"}, "otu69416": {"^ot:originalLabel": "Dioclea virgata", "^ot:ottId": 344290, "^ot:ottTaxonName": "Dioclea virgata"}, "otu69417": {"^ot:originalLabel": "Canavalia bonariensis", "^ot:ottId": 1080408, "^ot:ottTaxonName": "Canavalia bonariensis"}, "otu69418": {"^ot:originalLabel": "Canavalia brasiliensis", "^ot:ottId": 350146, "^ot:ottTaxonName": "Canavalia brasiliensis"}, "otu69419": {"^ot:originalLabel": "Lonchocarpus nitidus", "^ot:ottId": 3920386, "^ot:ottTaxonName": "Lonchocarpus nitidus"}}}}, "treesById": {"trees292": {"@otus": "otus292", "^ot:treeElementOrder": ["tree197", "tree198", "tree199"], "treeById": {"tree197": {"@xsi:type": "nex:FloatTree", "^ot:branchLengthDescription": "", "^ot:branchLengthMode": "", "^ot:branchLengthTimeUnit": "", "^ot:curatedType": "one of the 9 most parsimonious trees", "^ot:inGroupClade": "node176873", "^ot:outGroupEdge": "", "^ot:rootNodeId": "node176867", "^ot:specifiedRoot": "", "^ot:tag": [], "edgeBySourceId": {"node176867": {"edge176868": {"@source": "node176867", "@target": "node176868"}, "edge176869": {"@source": "node176867", "@target": "node176869"}}, "node176869": {"edge176870": {"@source": "node176869", "@target": "node176870"}, "edge176871": {"@source": "node176869", "@target": "node176871"}}, "node176871": {"edge176872": {"@source": "node176871", "@target": "node176872"}, "edge176873": {"@source": "node176871", "@target": "node176873"}}, "node176873": {"edge176874": {"@source": "node176873", "@target": "node176874"}, "edge176897": {"@source": "node176873", "@target": "node176897"}}, "node176874": {"edge176875": {"@source": "node176874", "@target": "node176875"}, "edge176876": {"@source": "node176874", "@target": "node176876"}, "edge176877": {"@source": "node176874", "@target": "node176877"}, "edge176878": {"@source": "node176874", "@target": "node176878"}, "edge176879": {"@source": "node176874", "@target": "node176879"}, "edge176880": {"@source": "node176874", "@target": "node176880"}, "edge176881": {"@source": "node176874", "@target": "node176881"}, "edge176882": {"@source": "node176874", "@target": "node176882"}, "edge176883": {"@source": "node176874", "@target": "node176883"}, "edge176892": {"@source": "node176874", "@target": "node176892"}}, "node176883": {"edge176884": {"@source": "node176883", "@target": "node176884"}, "edge176885": {"@source": "node176883", "@target": "node176885"}, "edge176886": {"@source": "node176883", "@target": "node176886"}, "edge176887": {"@source": "node176883", "@target": "node176887"}, "edge176888": {"@source": "node176883", "@target": "node176888"}, "edge176889": {"@source": "node176883", "@target": "node176889"}, "edge176890": {"@source": "node176883", "@target": "node176890"}, "edge176891": {"@source": "node176883", "@target": "node176891"}}, "node176892": {"edge176893": {"@source": "node176892", "@target": "node176893"}, "edge176894": {"@source": "node176892", "@target": "node176894"}, "edge176895": {"@source": "node176892", "@target": "node176895"}, "edge176896": {"@source": "node176892", "@target": "node176896"}}, "node176897": {"edge176898": {"@source": "node176897", "@target": "node176898"}, "edge176899": {"@source": "node176897", "@target": "node176899"}}}, "nodeById": {"node176867": {"@root": true}, "node176868": {"@otu": "otu69382"}, "node176869": {}, "node176870": {"@otu": "otu69383"}, "node176871": {}, "node176872": {"@otu": "otu69384"}, "node176873": {}, "node176874": {}, "node176875": {"@otu": "otu69385"}, "node176876": {"@otu": "otu69386"}, "node176877": {"@otu": "otu69387"}, "node176878": {"@otu": "otu69388"}, "node176879": {"@otu": "otu69389"}, "node176880": {"@otu": "otu69390"}, "node176881": {"@otu": "otu69391"}, "node176882": {"@otu": "otu69392"}, "node176883": {}, "node176884": {"@otu": "otu69393"}, "node176885": {"@otu": "otu69394"}, "node176886": {"@otu": "otu69395"}, "node176887": {"@otu": "otu69396"}, "node176888": {"@otu": "otu69397"}, "node176889": {"@otu": "otu69398"}, "node176890": {"@otu": "otu69399"}, "node176891": {"@otu": "otu69400"}, "node176892": {}, "node176893": {"@otu": "otu69401"}, "node176894": {"@otu": "otu69402"}, "node176895": {"@otu": "otu69403"}, "node176896": {"@otu": "otu69404"}, "node176897": {}, "node176898": {"@otu": "otu69405"}, "node176899": {"@otu": "otu69406"}}}, "tree198": {"@xsi:type": "nex:FloatTree", "^ot:branchLengthDescription": "", "^ot:branchLengthMode": "", "^ot:branchLengthTimeUnit": "", "^ot:curatedType": "one of the most parsimonious trees", "^ot:outGroupEdge": "", "^ot:rootNodeId": "node176900", "^ot:specifiedRoot": "", "^ot:tag": [], "edgeBySourceId": {"node176900": {"edge176901": {"@source": "node176900", "@target": "node176901"}, "edge176902": {"@source": "node176900", "@target": "node176902"}}, "node176902": {"edge176903": {"@source": "node176902", "@target": "node176903"}, "edge176906": {"@source": "node176902", "@target": "node176906"}}, "node176903": {"edge176904": {"@source": "node176903", "@target": "node176904"}, "edge176905": {"@source": "node176903", "@target": "node176905"}}, "node176906": {"edge176907": {"@source": "node176906", "@target": "node176907"}, "edge176914": {"@source": "node176906", "@target": "node176914"}}, "node176907": {"edge176908": {"@source": "node176907", "@target": "node176908"}, "edge176909": {"@source": "node176907", "@target": "node176909"}}, "node176909": {"edge176910": {"@source": "node176909", "@target": "node176910"}, "edge176911": {"@source": "node176909", "@target": "node176911"}}, "node176911": {"edge176912": {"@source": "node176911", "@target": "node176912"}, "edge176913": {"@source": "node176911", "@target": "node176913"}}, "node176914": {"edge176915": {"@source": "node176914", "@target": "node176915"}, "edge176916": {"@source": "node176914", "@target": "node176916"}}, "node176916": {"edge176917": {"@source": "node176916", "@target": "node176917"}, "edge176963": {"@source": "node176916", "@target": "node176963"}}, "node176917": {"edge176918": {"@source": "node176917", "@target": "node176918"}, "edge176956": {"@source": "node176917", "@target": "node176956"}}, "node176918": {"edge176919": {"@source": "node176918", "@target": "node176919"}, "edge176953": {"@source": "node176918", "@target": "node176953"}}, "node176919": {"edge176920": {"@source": "node176919", "@target": "node176920"}, "edge176921": {"@source": "node176919", "@target": "node176921"}, "edge176950": {"@source": "node176919", "@target": "node176950"}}, "node176921": {"edge176922": {"@source": "node176921", "@target": "node176922"}, "edge176947": {"@source": "node176921", "@target": "node176947"}}, "node176922": {"edge176923": {"@source": "node176922", "@target": "node176923"}, "edge176930": {"@source": "node176922", "@target": "node176930"}, "edge176933": {"@source": "node176922", "@target": "node176933"}}, "node176923": {"edge176924": {"@source": "node176923", "@target": "node176924"}, "edge176925": {"@source": "node176923", "@target": "node176925"}, "edge176926": {"@source": "node176923", "@target": "node176926"}, "edge176927": {"@source": "node176923", "@target": "node176927"}, "edge176928": {"@source": "node176923", "@target": "node176928"}, "edge176929": {"@source": "node176923", "@target": "node176929"}}, "node176930": {"edge176931": {"@source": "node176930", "@target": "node176931"}, "edge176932": {"@source": "node176930", "@target": "node176932"}}, "node176933": {"edge176934": {"@source": "node176933", "@target": "node176934"}, "edge176935": {"@source": "node176933", "@target": "node176935"}, "edge176936": {"@source": "node176933", "@target": "node176936"}}, "node176936": {"edge176937": {"@source": "node176936", "@target": "node176937"}, "edge176938": {"@source": "node176936", "@target": "node176938"}}, "node176938": {"edge176939": {"@source": "node176938", "@target": "node176939"}, "edge176944": {"@source": "node176938", "@target": "node176944"}}, "node176939": {"edge176940": {"@source": "node176939", "@target": "node176940"}, "edge176941": {"@source": "node176939", "@target": "node176941"}}, "node176941": {"edge176942": {"@source": "node176941", "@target": "node176942"}, "edge176943": {"@source": "node176941", "@target": "node176943"}}, "node176944": {"edge176945": {"@source": "node176944", "@target": "node176945"}, "edge176946": {"@source": "node176944", "@target": "node176946"}}, "node176947": {"edge176948": {"@source": "node176947", "@target": "node176948"}, "edge176949": {"@source": "node176947", "@target": "node176949"}}, "node176950": {"edge176951": {"@source": "node176950", "@target": "node176951"}, "edge176952": {"@source": "node176950", "@target": "node176952"}}, "node176953": {"edge176954": {"@source": "node176953", "@target": "node176954"}, "edge176955": {"@source": "node176953", "@target": "node176955"}}, "node176956": {"edge176957": {"@source": "node176956", "@target": "node176957"}, "edge176958": {"@source": "node176956", "@target": "node176958"}}, "node176958": {"edge176959": {"@source": "node176958", "@target": "node176959"}, "edge176960": {"@source": "node176958", "@target": "node176960"}}, "node176960": {"edge176961": {"@source": "node176960", "@target": "node176961"}, "edge176962": {"@source": "node176960", "@target": "node176962"}}, "node176963": {"edge176964": {"@source": "node176963", "@target": "node176964"}, "edge176965": {"@source": "node176963", "@target": "node176965"}}}, "nodeById": {"node176900": {"@root": true}, "node176901": {"@otu": "otu69407"}, "node176902": {}, "node176903": {}, "node176904": {"@otu": "otu69382"}, "node176905": {"@otu": "otu69383"}, "node176906": {}, "node176907": {}, "node176908": {"@otu": "otu69408"}, "node176909": {}, "node176910": {"@otu": "otu69409"}, "node176911": {}, "node176912": {"@otu": "otu69410"}, "node176913": {"@otu": "otu69411"}, "node176914": {}, "node176915": {"@otu": "otu69412"}, "node176916": {}, "node176917": {}, "node176918": {}, "node176919": {}, "node176920": {"@otu": "otu69384"}, "node176921": {}, "node176922": {}, "node176923": {}, "node176924": {"@otu": "otu69393"}, "node176925": {"@otu": "otu69394"}, "node176926": {"@otu": "otu69395"}, "node176927": {"@otu": "otu69396"}, "node176928": {"@otu": "otu69398"}, "node176929": {"@otu": "otu69399"}, "node176930": {}, "node176931": {"@otu": "otu69385"}, "node176932": {"@otu": "otu69389"}, "node176933": {}, "node176934": {"@otu": "otu69387"}, "node176935": {"@otu": "otu69392"}, "node176936": {}, "node176937": {"@otu": "otu69391"}, "node176938": {}, "node176939": {}, "node176940": {"@otu": "otu69404"}, "node176941": {}, "node176942": {"@otu": "otu69403"}, "node176943": {"@otu": "otu69388"}, "node176944": {}, "node176945": {"@otu": "otu69401"}, "node176946": {"@otu": "otu69402"}, "node176947": {}, "node176948": {"@otu": "otu69397"}, "node176949": {"@otu": "otu69400"}, "node176950": {}, "node176951": {"@otu": "otu69386"}, "node176952": {"@otu": "otu69390"}, "node176953": {}, "node176954": {"@otu": "otu69405"}, "node176955": {"@otu": "otu69406"}, "node176956": {}, "node176957": {"@otu": "otu69413"}, "node176958": {}, "node176959": {"@otu": "otu69414"}, "node176960": {}, "node176961": {"@otu": "otu69415"}, "node176962": {"@otu": "otu69416"}, "node176963": {}, "node176964": {"@otu": "otu69417"}, "node176965": {"@otu": "otu69418"}}}, "tree199": {"@xsi:type": "nex:FloatTree", "^ot:branchLengthDescription": "", "^ot:branchLengthMode": "", "^ot:branchLengthTimeUnit": "", "^ot:curatedType": "strict consensus parsimony tree", "^ot:inGroupClade": "node176973", "^ot:outGroupEdge": "", "^ot:rootNodeId": "node176966", "^ot:specifiedRoot": "node176966", "^ot:tag": [], "^ot:unrootedTree": false, "edgeBySourceId": {"node176966": {"edge176967": {"@source": "node176966", "@target": "node176967"}, "edge176968": {"@source": "node176966", "@target": "node176968"}}, "node176968": {"edge176969": {"@source": "node176968", "@target": "node176969"}, "edge176970": {"@source": "node176968", "@target": "node176970"}}, "node176970": {"edge176971": {"@source": "node176970", "@target": "node176971"}, "edge176972": {"@source": "node176970", "@target": "node176972"}}, "node176972": {"edge176973": {"@source": "node176972", "@target": "node176973"}, "edge177017": {"@source": "node176972", "@target": "node177017"}}, "node176973": {"edge176974": {"@source": "node176973", "@target": "node176974"}, "edge177014": {"@source": "node176973", "@target": "node177014"}}, "node176974": {"edge176975": {"@source": "node176974", "@target": "node176975"}, "edge176976": {"@source": "node176974", "@target": "node176976"}}, "node176976": {"edge176977": {"@source": "node176976", "@target": "node176977"}, "edge177011": {"@source": "node176976", "@target": "node177011"}}, "node176977": {"edge176978": {"@source": "node176977", "@target": "node176978"}, "edge176997": {"@source": "node176977", "@target": "node176997"}}, "node176978": {"edge176979": {"@source": "node176978", "@target": "node176979"}, "edge176994": {"@source": "node176978", "@target": "node176994"}}, "node176979": {"edge176980": {"@source": "node176979", "@target": "node176980"}, "edge176991": {"@source": "node176979", "@target": "node176991"}}, "node176980": {"edge176981": {"@source": "node176980", "@target": "node176981"}, "edge176982": {"@source": "node176980", "@target": "node176982"}}, "node176982": {"edge176983": {"@source": "node176982", "@target": "node176983"}, "edge176984": {"@source": "node176982", "@target": "node176984"}}, "node176984": {"edge176985": {"@source": "node176984", "@target": "node176985"}, "edge176988": {"@source": "node176984", "@target": "node176988"}}, "node176985": {"edge176986": {"@source": "node176985", "@target": "node176986"}, "edge176987": {"@source": "node176985", "@target": "node176987"}}, "node176988": {"edge176989": {"@source": "node176988", "@target": "node176989"}, "edge176990": {"@source": "node176988", "@target": "node176990"}}, "node176991": {"edge176992": {"@source": "node176991", "@target": "node176992"}, "edge176993": {"@source": "node176991", "@target": "node176993"}}, "node176994": {"edge176995": {"@source": "node176994", "@target": "node176995"}, "edge176996": {"@source": "node176994", "@target": "node176996"}}, "node176997": {"edge176998": {"@source": "node176997", "@target": "node176998"}, "edge176999": {"@source": "node176997", "@target": "node176999"}}, "node176999": {"edge177000": {"@source": "node176999", "@target": "node177000"}, "edge177001": {"@source": "node176999", "@target": "node177001"}}, "node177001": {"edge177002": {"@source": "node177001", "@target": "node177002"}, "edge177003": {"@source": "node177001", "@target": "node177003"}}, "node177003": {"edge177004": {"@source": "node177003", "@target": "node177004"}, "edge177005": {"@source": "node177003", "@target": "node177005"}, "edge177006": {"@source": "node177003", "@target": "node177006"}}, "node177006": {"edge177007": {"@source": "node177006", "@target": "node177007"}, "edge177008": {"@source": "node177006", "@target": "node177008"}}, "node177008": {"edge177009": {"@source": "node177008", "@target": "node177009"}, "edge177010": {"@source": "node177008", "@target": "node177010"}}, "node177011": {"edge177012": {"@source": "node177011", "@target": "node177012"}, "edge177013": {"@source": "node177011", "@target": "node177013"}}, "node177014": {"edge177015": {"@source": "node177014", "@target": "node177015"}, "edge177016": {"@source": "node177014", "@target": "node177016"}}, "node177017": {"edge177018": {"@source": "node177017", "@target": "node177018"}, "edge177019": {"@source": "node177017", "@target": "node177019"}}}, "nodeById": {"node176966": {"@root": true}, "node176967": {"@otu": "otu69407"}, "node176968": {}, "node176969": {"@otu": "otu69419"}, "node176970": {}, "node176971": {"@otu": "otu69417"}, "node176972": {}, "node176973": {}, "node176974": {}, "node176975": {"@otu": "otu69384"}, "node176976": {}, "node176977": {}, "node176978": {}, "node176979": {}, "node176980": {}, "node176981": {"@otu": "otu69395"}, "node176982": {}, "node176983": {"@otu": "otu69393"}, "node176984": {}, "node176985": {}, "node176986": {"@otu": "otu69398"}, "node176987": {"@otu": "otu69399"}, "node176988": {}, "node176989": {"@otu": "otu69394"}, "node176990": {"@otu": "otu69396"}, "node176991": {}, "node176992": {"@otu": "otu69397"}, "node176993": {"@otu": "otu69400"}, "node176994": {}, "node176995": {"@otu": "otu69385"}, "node176996": {"@otu": "otu69389"}, "node176997": {}, "node176998": {"@otu": "otu69387"}, "node176999": {}, "node177000": {"@otu": "otu69392"}, "node177001": {}, "node177002": {"@otu": "otu69391"}, "node177003": {}, "node177004": {"@otu": "otu69401"}, "node177005": {"@otu": "otu69402"}, "node177006": {}, "node177007": {"@otu": "otu69404"}, "node177008": {}, "node177009": {"@otu": "otu69403"}, "node177010": {"@otu": "otu69388"}, "node177011": {}, "node177012": {"@otu": "otu69386"}, "node177013": {"@otu": "otu69390"}, "node177014": {}, "node177015": {"@otu": "otu69406"}, "node177016": {"@otu": "otu69405"}, "node177017": {}, "node177018": {"@otu": "otu69415"}, "node177019": {"@otu": "otu69416"}}}}}}}}, "branch2sha": {"master": "19ec8a2da4b35c55075f155f9fb4d01281774fe5"}, "commentHTML": "", "duplicateStudyIDs": ["pg_135"], "shardName": "phylesystem-1", "versionHistory": [{"id": "d33fb39501605772a074dffc82affa5344ea9a94", "author_name": "Mark T. Holder", "author_email": "mtholder@gmail.com", "date": "Wed, 11 Jun 2014 22:18:34 -0500", "date_ISO_8601": "2014-06-11 22:18:34 -0500", "relative_date": "12 years ago", "message_subject": "corrected study ids"}, {"id": "f8a738aeda20a73750847484e110a85c7a3e0a12", "author_name": "Mark T. Holder", "author_email": "mtholder@gmail.com", "date": "Tue, 10 Jun 2014 23:36:42 -0500", "date_ISO_8601": "2014-06-10 23:36:42 -0500", "relative_date": "12 years ago", "message_subject": "Migrating info from gcmdr to nexsons", "message_body": "using peyotl d69c8b180fce7703c7203a0b51712eab57e2988c\ndev/decorate_pg_studies_with_gcmdr_info.py\nto set:\n  ^ot:candidateTreeForSynthesis\n  ^ot:specifiedRoot, and\n  ^ot:unrootedTree\nproperties based on the use of the trees for synthesis study\nlists in gcmdr commit 35bf307e72bed4f59724762dde4a12965abcea92"}, {"id": "593d6fbab385716dc0a12f3fc95133e8b7479b37", "author_name": "Mark T. Holder", "author_email": "mtholder@gmail.com", "date": "Tue, 29 Apr 2014 20:05:19 -0500", "date_ISO_8601": "2014-04-29 20:05:19 -0500", "relative_date": "12 years ago", "message_subject": "initial commit with phylografter files from 29 Apr, 2014"}]}