#NEXUS
BEGIN TAXA;
    Dimensions NTax = 114;
    TaxLabels 'Chrysoxys sp.' 'Ochromonas distigma' 'Dinobryon sociale' 'Poterioochromonas sp.' 'Phaeoplaca thallosa' 'Epipyxis pulchra' 'Paraphysomonas vestita' 'Chrysonephele palustris' 'Chrysophyta sp.' 'Spumella sp.' 'Spumella elongata' 'Uroglena americana' 'Chrysosaccus sp.' 'Chromophyton cf. rosanoffii' 'Mallomonas rasilis' 'Synura sphagnicola' 'Tessellaria volvocina strain CCMP1781' 'Tessellaria volvocina' 'Oikomonas mutabilis' 'Chromulina nebulosa' 'Chrysamoeba tenera' 'Chrysosphaerella sp.' 'Chrysocapsa paludosa' 'Hibberdia magna' 'Synchroma grande' 'Chlamydomyxa labyrinthuloides' 'Leukarachnion sp.' 'Picophagus flagellatus' 'Pelagomonas calceolata' 'Pelagococcus subviridis' 'Aureococcus anophagefferens' 'Ciliophrys infusionum' 'Rhizochromulina marina' 'Dictyocha speculum' 'Scytosiphon lomentaria' 'Ectocarpus siliculosus' 'Costaria costata' 'Pelvetia babingtonii' 'Fucus distichus' 'Schizocladia ischiensis' 'Heterococcus pleurococcoides' 'Sphaerosorus composita' 'Vaucheria bursata' 'Phaeothamnion confervicola' 'Haramonas dimorpha' 'Heterosigma akashiwo' 'Fibrocapsa japonica' 'Eustigmatos magna' 'Vischeria helvetica' 'Nannochloropsis maritima' 'Pseudostaurastrum enorme' 'Pseudostaurastrum limneticum' 'Glossomastix chrysoplasta' 'Pinguiochrysis pyriformis' 'Thalassiosira pseudonana' 'Thalassiosira weissflogii' 'Skeletonema costatum' 'Nitzschia thermalis' 'Phaeodactylum tricornutum' 'Pseudo-nitzschia multiseries' 'Bolidomonas mediterranea' 'Bolidomonas pacifica' 'Leptolegnia chapmanii' 'Achlya bisexualis' 'Apodachlya brachynema' 'Phytophthora palmivora' 'Lagenidium giganteum' 'Developayella elegans' 'Hyphochytrium catenoides' 'Rhizidiomyces apophysatus' 'Protoopalina intestinalis' 'Protoopalina japonica' 'Karotomorpha sp.' 'Proteromonas lacertae' 'Unidentified guinea pig faeces isolate' 'Caecitellus sp.' 'Cafeteria roenbergensis' 'Wobblia lunata' 'Schizochytrium mangrovei' 'Schizochytrium sp.' 'Schizochytrium aggregatum' 'Japonochytrium marinum' 'Labyrinthuloides haliotidis' 'Thraustochytrium aggregatum' 'Thraustochytriidae sp.' 'Schizochytrium minutum' 'Aplanochytrium kerguelense' 'Aplanochytrium sp.' 'Aplanochytrium stocchinoi' 'Labyrinthula sp.' 'Peridinium willei' 'Prorocentrum minimum' 'Peridinium foliaceum' 'Oxyrrhis marina' 'Perkinsus marinus' 'Paramecium caudatum' 'Tetrahymena thermophila' 'Babesia bovis' 'Cercomonas sp.' 'Thaumatomonas seravini' 'Bigelowiella natans' 'Isochrysis galbana' 'Prymnesium parvum' 'Pavlova lutheri' 'Goniomonas truncata' 'Guillardia theta' 'Candida albicans' 'Saccharomyces cerevisiae' 'Schizosaccharomyces pombe' 'Ustilago maydis' 'Gallus gallus' 'Homo sapiens' 'Danio rerio' 'Drosophila melanogaster' ;
END;
BEGIN TREES;
    Tree tree6681 = (((((((((((((((((((((('Chrysoxys sp.','Ochromonas distigma'),'Dinobryon sociale'),(('Poterioochromonas sp.','Phaeoplaca thallosa'),'Epipyxis pulchra')),('Paraphysomonas vestita','Chrysonephele palustris')),((('Chrysophyta sp.','Spumella sp.'),'Spumella elongata'),'Uroglena americana')),('Chrysosaccus sp.','Chromophyton cf. rosanoffii')),(('Mallomonas rasilis','Synura sphagnicola'),('Tessellaria volvocina strain CCMP1781','Tessellaria volvocina'))),(((('Oikomonas mutabilis','Chromulina nebulosa'),'Chrysamoeba tenera'),'Chrysosphaerella sp.'),('Chrysocapsa paludosa','Hibberdia magna'))),(('Synchroma grande','Chlamydomyxa labyrinthuloides'),'Leukarachnion sp.')),'Picophagus flagellatus'),(('Pelagomonas calceolata','Pelagococcus subviridis'),'Aureococcus anophagefferens')),(('Ciliophrys infusionum','Rhizochromulina marina'),'Dictyocha speculum')),((((((('Scytosiphon lomentaria','Ectocarpus siliculosus'),'Costaria costata'),('Pelvetia babingtonii','Fucus distichus')),'Schizocladia ischiensis'),((('Heterococcus pleurococcoides','Sphaerosorus composita'),'Vaucheria bursata'),'Phaeothamnion confervicola')),(('Haramonas dimorpha','Heterosigma akashiwo'),'Fibrocapsa japonica')),(((('Eustigmatos magna','Vischeria helvetica'),'Nannochloropsis maritima'),('Pseudostaurastrum enorme','Pseudostaurastrum limneticum')),('Glossomastix chrysoplasta','Pinguiochrysis pyriformis')))),(((('Thalassiosira pseudonana','Thalassiosira weissflogii'),'Skeletonema costatum'),(('Nitzschia thermalis','Phaeodactylum tricornutum'),'Pseudo-nitzschia multiseries')),('Bolidomonas mediterranea','Bolidomonas pacifica'))),((((('Leptolegnia chapmanii','Achlya bisexualis'),'Apodachlya brachynema'),('Phytophthora palmivora','Lagenidium giganteum')),'Developayella elegans'),('Hyphochytrium catenoides','Rhizidiomyces apophysatus'))),((((('Protoopalina intestinalis','Protoopalina japonica'),'Karotomorpha sp.'),'Proteromonas lacertae'),'Unidentified guinea pig faeces isolate'),(('Caecitellus sp.','Cafeteria roenbergensis'),'Wobblia lunata'))),(((((('Schizochytrium mangrovei','Schizochytrium sp.'),'Schizochytrium aggregatum'),('Japonochytrium marinum','Labyrinthuloides haliotidis')),'Thraustochytrium aggregatum'),('Thraustochytriidae sp.','Schizochytrium minutum')),((('Aplanochytrium kerguelense','Aplanochytrium sp.'),'Aplanochytrium stocchinoi'),'Labyrinthula sp.'))),((((('Peridinium willei','Prorocentrum minimum'),'Peridinium foliaceum'),'Oxyrrhis marina'),'Perkinsus marinus'),(('Paramecium caudatum','Tetrahymena thermophila'),'Babesia bovis'))),(('Cercomonas sp.','Thaumatomonas seravini'),'Bigelowiella natans')),(('Isochrysis galbana','Prymnesium parvum'),'Pavlova lutheri')),('Goniomonas truncata','Guillardia theta')),(((('Candida albicans','Saccharomyces cerevisiae'),'Schizosaccharomyces pombe'),'Ustilago maydis'),((('Gallus gallus','Homo sapiens'),'Danio rerio'),'Drosophila melanogaster')));
END;