{"sha": "1bbbe21bdd9a32ef81abeb3f038a977fdc0e8e7b", "data": {"nexml": {"@generator": "Phylografter nexml-json exporter", "@id": "study", "@nexml2json": "1.2.1", "@nexmljson": "http://purl.org/opentree/nexson", "@version": "0.9", "@xmlns": {"$": "http://www.nexml.org/2009", "nex": "http://www.nexml.org/2009", "ot": "http://purl.org/opentree-terms#", "xsd": "http://www.w3.org/2001/XMLSchema#", "xsi": "http://www.w3.org/2001/XMLSchema-instance"}, "^ot:agents": {"agent": [{"@description": "validator of NexSON constraints as well as constraints that would allow a study to be imported into the Open Tree of Life's phylogenetic synthesis tools", "@id": "peyotl-validator", "@name": "validate_ot_nexson.py", "@url": "https://github.com/OpenTreeOfLife/peyotl", "@version": "0.0.4a", "invocation": {"commandLine": ["--embed", "--agent-only"], "otherProperty": [{"name": "pythonVersion", "value": "2.7.5+"}, {"name": "pythonImplementation", "value": "CPython"}]}}]}, "^ot:annotationEvents": {"annotation": [{"@id": "peyotl-validator-event", "@description": "Open Tree NexSON validation", "@wasAssociatedWithAgentId": "peyotl-validator", "@passedChecks": true, "@preserve": false, "message": [{"@code": "MULTIPLE_TIPS_MAPPED_TO_OTT_ID", "data": ["otu161970", "otu161973", "otu161977", "otu161987", "otu161989", "otu161991", "otu161992", "otu161993", "otu161994", "otu161996"], "refersTo": {"@top": "otus", "@idref": "otus471", "@otusID": "otus471"}, "@severity": "WARNING"}, {"@code": "MULTIPLE_TIPS_MAPPED_TO_OTT_ID", "data": ["otu161971", "otu161972", "otu161974", "otu161975", "otu161976", "otu161978", "otu161979", "otu161980", "otu161981", "otu161982", "otu161983", "otu161984", "otu161985", "otu161986", "otu161990", "otu161995", "otu161997", "otu161998", "otu161999", "otu162000"], "refersTo": {"@top": "otus", "@idref": "otus471", "@otusID": "otus471"}, "@severity": "WARNING"}]}]}, "^ot:candidateTreeForSynthesis": [], "^ot:curatorName": "Romina Gazis", "^ot:dataDeposit": {"@href": "http://purl.org/phylo/treebase/phylows/study/TB2:S1944"}, "^ot:focalClade": 464790, "^ot:focalCladeOTTTaxonName": "Alternaria", "^ot:messages": {"message": []}, "^ot:otusElementOrder": ["otus471"], "^ot:studyId": "pg_471", "^ot:studyPublication": {"@href": "http://dx.doi.org/10.3852/07-186R1"}, "^ot:studyPublicationReference": "Park M., Culler C., & Pryor B. 2007. A re-examination of the phylogenetic relationship between the causal agents of carrot black rot, Alternaria radicina and A. carotiincultae. Mycologia, 100(3): 511-527.", "^ot:studyYear": 2007, "^ot:tag": [], "^ot:treesElementOrder": ["trees471"], "otusById": {"otus471": {"otuById": {"otu161967": {"^ot:originalLabel": "Alternaria symrnii", "^ot:ottId": 325512, "^ot:ottTaxonName": "Alternaria smyrnii", "^ot:treebaseOTUId": "Tl200876"}, "otu161968": {"^ot:originalLabel": "Alternaria petroselini", "^ot:ottId": 325510, "^ot:ottTaxonName": "Alternaria petroselini", "^ot:treebaseOTUId": "Tl200882"}, "otu161969": {"^ot:originalLabel": "Alternaria selini", "^ot:ottId": 325522, "^ot:ottTaxonName": "Alternaria selini", "^ot:treebaseOTUId": "Tl200893"}, "otu161970": {"^ot:originalLabel": "Alternaria carotiincultae BMP0064", "^ot:ottId": 325520, "^ot:ottTaxonName": "Alternaria carotiincultae", "^ot:treebaseOTUId": "Tl71228"}, "otu161971": {"^ot:originalLabel": "Alternaria radicina BMP0089", "^ot:ottId": 325511, "^ot:ottTaxonName": "Alternaria radicina", "^ot:treebaseOTUId": "Tl71229"}, "otu161972": {"^ot:originalLabel": "Alternaria radicina BMP0111", "^ot:ottId": 325511, "^ot:ottTaxonName": "Alternaria radicina", "^ot:treebaseOTUId": "Tl71230"}, "otu161973": {"^ot:originalLabel": "Alternaria carotiincultae BMP0133", "^ot:ottId": 325520, "^ot:ottTaxonName": "Alternaria carotiincultae", "^ot:treebaseOTUId": "Tl71231"}, "otu161974": {"^ot:originalLabel": "Alternaria radicina BMP0065", "^ot:ottId": 325511, "^ot:ottTaxonName": "Alternaria radicina", "^ot:treebaseOTUId": "Tl71232"}, "otu161975": {"^ot:originalLabel": "Alternaria radicina BMP0094", "^ot:ottId": 325511, "^ot:ottTaxonName": "Alternaria radicina", "^ot:treebaseOTUId": "Tl71233"}, "otu161976": {"^ot:originalLabel": "Alternaria radicina BMP0105", "^ot:ottId": 325511, "^ot:ottTaxonName": "Alternaria radicina", "^ot:treebaseOTUId": "Tl71234"}, "otu161977": {"^ot:originalLabel": "Alternaria carotiincultae BMP0078", "^ot:ottId": 325520, "^ot:ottTaxonName": "Alternaria carotiincultae", "^ot:treebaseOTUId": "Tl71235"}, "otu161978": {"^ot:originalLabel": "Alternaria radicina BMP0047", "^ot:ottId": 325511, "^ot:ottTaxonName": "Alternaria radicina", "^ot:treebaseOTUId": "Tl71236"}, "otu161979": {"^ot:originalLabel": "Alternaria radicina BMP0079", "^ot:ottId": 325511, "^ot:ottTaxonName": "Alternaria radicina", "^ot:treebaseOTUId": "Tl71237"}, "otu161980": {"^ot:originalLabel": "Alternaria radicina BMP0090", "^ot:ottId": 325511, "^ot:ottTaxonName": "Alternaria radicina", "^ot:treebaseOTUId": "Tl71238"}, "otu161981": {"^ot:originalLabel": "Alternaria radicina BMP0108", "^ot:ottId": 325511, "^ot:ottTaxonName": "Alternaria radicina", "^ot:treebaseOTUId": "Tl71239"}, "otu161982": {"^ot:originalLabel": "Alternaria radicina BMP0097", "^ot:ottId": 325511, "^ot:ottTaxonName": "Alternaria radicina", "^ot:treebaseOTUId": "Tl71241"}, "otu161983": {"^ot:originalLabel": "Alternaria radicina BMP0055", "^ot:ottId": 325511, "^ot:ottTaxonName": "Alternaria radicina", "^ot:treebaseOTUId": "Tl71242"}, "otu161984": {"^ot:originalLabel": "Alternaria radicina BMP0093", "^ot:ottId": 325511, "^ot:ottTaxonName": "Alternaria radicina", "^ot:treebaseOTUId": "Tl71243"}, "otu161985": {"^ot:originalLabel": "Alternaria radicina BMP0099", "^ot:ottId": 325511, "^ot:ottTaxonName": "Alternaria radicina", "^ot:treebaseOTUId": "Tl71244"}, "otu161986": {"^ot:originalLabel": "Alternaria radicina BMP0066", "^ot:ottId": 325511, "^ot:ottTaxonName": "Alternaria radicina", "^ot:treebaseOTUId": "Tl71245"}, "otu161987": {"^ot:originalLabel": "Alternaria carotiincultae BMP0130", "^ot:ottId": 325520, "^ot:ottTaxonName": "Alternaria carotiincultae", "^ot:treebaseOTUId": "Tl71246"}, "otu161988": {"^ot:originalLabel": "Alternaria alternate", "^ot:ottId": 464784, "^ot:ottTaxonName": "Alternaria alternata", "^ot:treebaseOTUId": "Tl71247"}, "otu161989": {"^ot:originalLabel": "Alternaria carotiincultae BMP0075", "^ot:ottId": 325520, "^ot:ottTaxonName": "Alternaria carotiincultae", "^ot:treebaseOTUId": "Tl71248"}, "otu161990": {"^ot:originalLabel": "Alternaria radicina BMP0073", "^ot:ottId": 325511, "^ot:ottTaxonName": "Alternaria radicina", "^ot:treebaseOTUId": "Tl71249"}, "otu161991": {"^ot:originalLabel": "Alternaria carotiincultae BMP0132", "^ot:ottId": 325520, "^ot:ottTaxonName": "Alternaria carotiincultae", "^ot:treebaseOTUId": "Tl71250"}, "otu161992": {"^ot:originalLabel": "Alternaria carotiincultae BMP0076", "^ot:ottId": 325520, "^ot:ottTaxonName": "Alternaria carotiincultae", "^ot:treebaseOTUId": "Tl71251"}, "otu161993": {"^ot:originalLabel": "Alternaria carotiincultae BMP0131", "^ot:ottId": 325520, "^ot:ottTaxonName": "Alternaria carotiincultae", "^ot:treebaseOTUId": "Tl71252"}, "otu161994": {"^ot:originalLabel": "Alternaria carotiincultae BMP0095", "^ot:ottId": 325520, "^ot:ottTaxonName": "Alternaria carotiincultae", "^ot:treebaseOTUId": "Tl71253"}, "otu161995": {"^ot:originalLabel": "Alternaria radicina BMP0074", "^ot:ottId": 325511, "^ot:ottTaxonName": "Alternaria radicina", "^ot:treebaseOTUId": "Tl71254"}, "otu161996": {"^ot:originalLabel": "Alternaria carotiincultae BMP0129", "^ot:ottId": 325520, "^ot:ottTaxonName": "Alternaria carotiincultae", "^ot:treebaseOTUId": "Tl71255"}, "otu161997": {"^ot:originalLabel": "Alternaria radicina BMP0104", "^ot:ottId": 325511, "^ot:ottTaxonName": "Alternaria radicina", "^ot:treebaseOTUId": "Tl71256"}, "otu161998": {"^ot:originalLabel": "Alternaria radicina BMP0096", "^ot:ottId": 325511, "^ot:ottTaxonName": "Alternaria radicina", "^ot:treebaseOTUId": "Tl71257"}, "otu161999": {"^ot:originalLabel": "Alternaria radicina BMP0062", "^ot:ottId": 325511, "^ot:ottTaxonName": "Alternaria radicina", "^ot:treebaseOTUId": "Tl71258"}, "otu162000": {"^ot:originalLabel": "Alternaria radicina BMP0098", "^ot:ottId": 325511, "^ot:ottTaxonName": "Alternaria radicina", "^ot:treebaseOTUId": "Tl71259"}}}}, "treesById": {"trees471": {"@otus": "otus471", "^ot:treeElementOrder": ["tree617", "tree618", "tree619", "tree620"], "treeById": {"tree617": {"@xsi:type": "nex:FloatTree", "^ot:branchLengthDescription": "", "^ot:branchLengthMode": "", "^ot:branchLengthTimeUnit": "", "^ot:curatedType": "MP, EF-1", "^ot:inGroupClade": "node317925", "^ot:outGroupEdge": "", "^ot:rootNodeId": "node317923", "^ot:specifiedRoot": "", "^ot:tag": [], "edgeBySourceId": {"node317923": {"edge317924": {"@source": "node317923", "@target": "node317924"}, "edge317925": {"@source": "node317923", "@target": "node317925"}}, "node317925": {"edge317926": {"@source": "node317925", "@target": "node317926"}, "edge317931": {"@source": "node317925", "@target": "node317931"}}, "node317926": {"edge317927": {"@source": "node317926", "@target": "node317927"}, "edge317928": {"@source": "node317926", "@target": "node317928"}}, "node317928": {"edge317929": {"@source": "node317928", "@target": "node317929"}, "edge317930": {"@source": "node317928", "@target": "node317930"}}, "node317931": {"edge317932": {"@source": "node317931", "@target": "node317932"}, "edge317943": {"@source": "node317931", "@target": "node317943"}, "edge317944": {"@source": "node317931", "@target": "node317944"}, "edge317945": {"@source": "node317931", "@target": "node317945"}, "edge317946": {"@source": "node317931", "@target": "node317946"}, "edge317947": {"@source": "node317931", "@target": "node317947"}, "edge317948": {"@source": "node317931", "@target": "node317948"}, "edge317949": {"@source": "node317931", "@target": "node317949"}, "edge317950": {"@source": "node317931", "@target": "node317950"}, "edge317951": {"@source": "node317931", "@target": "node317951"}, "edge317952": {"@source": "node317931", "@target": "node317952"}, "edge317953": {"@source": "node317931", "@target": "node317953"}, "edge317954": {"@source": "node317931", "@target": "node317954"}, "edge317955": {"@source": "node317931", "@target": "node317955"}, "edge317956": {"@source": "node317931", "@target": "node317956"}, "edge317957": {"@source": "node317931", "@target": "node317957"}, "edge317958": {"@source": "node317931", "@target": "node317958"}, "edge317959": {"@source": "node317931", "@target": "node317959"}, "edge317960": {"@source": "node317931", "@target": "node317960"}, "edge317961": {"@source": "node317931", "@target": "node317961"}, "edge317962": {"@source": "node317931", "@target": "node317962"}}, "node317932": {"edge317933": {"@source": "node317932", "@target": "node317933"}, "edge317934": {"@source": "node317932", "@target": "node317934"}, "edge317935": {"@source": "node317932", "@target": "node317935"}, "edge317936": {"@source": "node317932", "@target": "node317936"}, "edge317937": {"@source": "node317932", "@target": "node317937"}, "edge317938": {"@source": "node317932", "@target": "node317938"}, "edge317939": {"@source": "node317932", "@target": "node317939"}, "edge317940": {"@source": "node317932", "@target": "node317940"}, "edge317941": {"@source": "node317932", "@target": "node317941"}, "edge317942": {"@source": "node317932", "@target": "node317942"}}}, "nodeById": {"node317923": {"@root": true}, "node317924": {"@otu": "otu161988"}, "node317925": {}, "node317926": {}, "node317927": {"@otu": "otu161967"}, "node317928": {}, "node317929": {"@otu": "otu161969"}, "node317930": {"@otu": "otu161968"}, "node317931": {}, "node317932": {}, "node317933": {"@otu": "otu161973"}, "node317934": {"@otu": "otu161991"}, "node317935": {"@otu": "otu161993"}, "node317936": {"@otu": "otu161987"}, "node317937": {"@otu": "otu161996"}, "node317938": {"@otu": "otu161994"}, "node317939": {"@otu": "otu161977"}, "node317940": {"@otu": "otu161992"}, "node317941": {"@otu": "otu161989"}, "node317942": {"@otu": "otu161970"}, "node317943": {"@otu": "otu161972"}, "node317944": {"@otu": "otu161976"}, "node317945": {"@otu": "otu161997"}, "node317946": {"@otu": "otu161985"}, "node317947": {"@otu": "otu162000"}, "node317948": {"@otu": "otu161981"}, "node317949": {"@otu": "otu161982"}, "node317950": {"@otu": "otu161998"}, "node317951": {"@otu": "otu161975"}, "node317952": {"@otu": "otu161984"}, "node317953": {"@otu": "otu161980"}, "node317954": {"@otu": "otu161971"}, "node317955": {"@otu": "otu161979"}, "node317956": {"@otu": "otu161995"}, "node317957": {"@otu": "otu161990"}, "node317958": {"@otu": "otu161986"}, "node317959": {"@otu": "otu161974"}, "node317960": {"@otu": "otu161999"}, "node317961": {"@otu": "otu161983"}, "node317962": {"@otu": "otu161978"}}}, "tree618": {"@xsi:type": "nex:FloatTree", "^ot:branchLengthDescription": "", "^ot:branchLengthMode": "", "^ot:branchLengthTimeUnit": "", "^ot:curatedType": "MP, b-tubulin", "^ot:inGroupClade": "node317965", "^ot:outGroupEdge": "", "^ot:rootNodeId": "node317963", "^ot:specifiedRoot": "", "^ot:tag": [], "edgeBySourceId": {"node317963": {"edge317964": {"@source": "node317963", "@target": "node317964"}, "edge317965": {"@source": "node317963", "@target": "node317965"}}, "node317965": {"edge317966": {"@source": "node317965", "@target": "node317966"}, "edge317967": {"@source": "node317965", "@target": "node317967"}, "edge317970": {"@source": "node317965", "@target": "node317970"}}, "node317967": {"edge317968": {"@source": "node317967", "@target": "node317968"}, "edge317969": {"@source": "node317967", "@target": "node317969"}}, "node317970": {"edge317971": {"@source": "node317970", "@target": "node317971"}, "edge317983": {"@source": "node317970", "@target": "node317983"}, "edge317984": {"@source": "node317970", "@target": "node317984"}, "edge317985": {"@source": "node317970", "@target": "node317985"}, "edge317986": {"@source": "node317970", "@target": "node317986"}, "edge317987": {"@source": "node317970", "@target": "node317987"}, "edge317988": {"@source": "node317970", "@target": "node317988"}, "edge317989": {"@source": "node317970", "@target": "node317989"}, "edge317990": {"@source": "node317970", "@target": "node317990"}, "edge317991": {"@source": "node317970", "@target": "node317991"}, "edge317992": {"@source": "node317970", "@target": "node317992"}, "edge317993": {"@source": "node317970", "@target": "node317993"}, "edge317994": {"@source": "node317970", "@target": "node317994"}, "edge317998": {"@source": "node317970", "@target": "node317998"}, "edge317999": {"@source": "node317970", "@target": "node317999"}, "edge318000": {"@source": "node317970", "@target": "node318000"}, "edge318001": {"@source": "node317970", "@target": "node318001"}, "edge318002": {"@source": "node317970", "@target": "node318002"}, "edge318003": {"@source": "node317970", "@target": "node318003"}}, "node317971": {"edge317972": {"@source": "node317971", "@target": "node317972"}, "edge317973": {"@source": "node317971", "@target": "node317973"}, "edge317978": {"@source": "node317971", "@target": "node317978"}, "edge317979": {"@source": "node317971", "@target": "node317979"}, "edge317980": {"@source": "node317971", "@target": "node317980"}, "edge317981": {"@source": "node317971", "@target": "node317981"}, "edge317982": {"@source": "node317971", "@target": "node317982"}}, "node317973": {"edge317974": {"@source": "node317973", "@target": "node317974"}, "edge317975": {"@source": "node317973", "@target": "node317975"}, "edge317976": {"@source": "node317973", "@target": "node317976"}, "edge317977": {"@source": "node317973", "@target": "node317977"}}, "node317994": {"edge317995": {"@source": "node317994", "@target": "node317995"}, "edge317996": {"@source": "node317994", "@target": "node317996"}, "edge317997": {"@source": "node317994", "@target": "node317997"}}}, "nodeById": {"node317963": {"@root": true}, "node317964": {"@otu": "otu161988"}, "node317965": {}, "node317966": {"@otu": "otu161967"}, "node317967": {}, "node317968": {"@otu": "otu161969"}, "node317969": {"@otu": "otu161968"}, "node317970": {}, "node317971": {}, "node317972": {"@otu": "otu161973"}, "node317973": {}, "node317974": {"@otu": "otu161991"}, "node317975": {"@otu": "otu161993"}, "node317976": {"@otu": "otu161977"}, "node317977": {"@otu": "otu161970"}, "node317978": {"@otu": "otu161987"}, "node317979": {"@otu": "otu161996"}, "node317980": {"@otu": "otu161994"}, "node317981": {"@otu": "otu161992"}, "node317982": {"@otu": "otu161989"}, "node317983": {"@otu": "otu161972"}, "node317984": {"@otu": "otu161976"}, "node317985": {"@otu": "otu161997"}, "node317986": {"@otu": "otu161985"}, "node317987": {"@otu": "otu162000"}, "node317988": {"@otu": "otu161981"}, "node317989": {"@otu": "otu161982"}, "node317990": {"@otu": "otu161998"}, "node317991": {"@otu": "otu161975"}, "node317992": {"@otu": "otu161984"}, "node317993": {"@otu": "otu161980"}, "node317994": {}, "node317995": {"@otu": "otu161971"}, "node317996": {"@otu": "otu161986"}, "node317997": {"@otu": "otu161978"}, "node317998": {"@otu": "otu161979"}, "node317999": {"@otu": "otu161995"}, "node318000": {"@otu": "otu161990"}, "node318001": {"@otu": "otu161974"}, "node318002": {"@otu": "otu161999"}, "node318003": {"@otu": "otu161983"}}}, "tree619": {"@xsi:type": "nex:FloatTree", "^ot:branchLengthDescription": "", "^ot:branchLengthMode": "", "^ot:branchLengthTimeUnit": "", "^ot:curatedType": "MP, alt a1 gene", "^ot:inGroupClade": "node318006", "^ot:outGroupEdge": "", "^ot:rootNodeId": "node318004", "^ot:specifiedRoot": "", "^ot:tag": [], "edgeBySourceId": {"node318004": {"edge318005": {"@source": "node318004", "@target": "node318005"}, "edge318006": {"@source": "node318004", "@target": "node318006"}}, "node318006": {"edge318007": {"@source": "node318006", "@target": "node318007"}, "edge318012": {"@source": "node318006", "@target": "node318012"}}, "node318007": {"edge318008": {"@source": "node318007", "@target": "node318008"}, "edge318009": {"@source": "node318007", "@target": "node318009"}}, "node318009": {"edge318010": {"@source": "node318009", "@target": "node318010"}, "edge318011": {"@source": "node318009", "@target": "node318011"}}, "node318012": {"edge318013": {"@source": "node318012", "@target": "node318013"}, "edge318025": {"@source": "node318012", "@target": "node318025"}}, "node318013": {"edge318014": {"@source": "node318013", "@target": "node318014"}, "edge318024": {"@source": "node318013", "@target": "node318024"}}, "node318014": {"edge318015": {"@source": "node318014", "@target": "node318015"}, "edge318016": {"@source": "node318014", "@target": "node318016"}, "edge318017": {"@source": "node318014", "@target": "node318017"}, "edge318018": {"@source": "node318014", "@target": "node318018"}, "edge318019": {"@source": "node318014", "@target": "node318019"}, "edge318020": {"@source": "node318014", "@target": "node318020"}, "edge318021": {"@source": "node318014", "@target": "node318021"}, "edge318022": {"@source": "node318014", "@target": "node318022"}, "edge318023": {"@source": "node318014", "@target": "node318023"}}, "node318025": {"edge318026": {"@source": "node318025", "@target": "node318026"}, "edge318046": {"@source": "node318025", "@target": "node318046"}}, "node318026": {"edge318027": {"@source": "node318026", "@target": "node318027"}, "edge318045": {"@source": "node318026", "@target": "node318045"}}, "node318027": {"edge318028": {"@source": "node318027", "@target": "node318028"}, "edge318029": {"@source": "node318027", "@target": "node318029"}, "edge318030": {"@source": "node318027", "@target": "node318030"}, "edge318031": {"@source": "node318027", "@target": "node318031"}, "edge318032": {"@source": "node318027", "@target": "node318032"}, "edge318033": {"@source": "node318027", "@target": "node318033"}, "edge318034": {"@source": "node318027", "@target": "node318034"}, "edge318035": {"@source": "node318027", "@target": "node318035"}, "edge318036": {"@source": "node318027", "@target": "node318036"}, "edge318037": {"@source": "node318027", "@target": "node318037"}, "edge318038": {"@source": "node318027", "@target": "node318038"}, "edge318039": {"@source": "node318027", "@target": "node318039"}, "edge318040": {"@source": "node318027", "@target": "node318040"}, "edge318041": {"@source": "node318027", "@target": "node318041"}, "edge318042": {"@source": "node318027", "@target": "node318042"}, "edge318043": {"@source": "node318027", "@target": "node318043"}, "edge318044": {"@source": "node318027", "@target": "node318044"}}, "node318046": {"edge318047": {"@source": "node318046", "@target": "node318047"}, "edge318048": {"@source": "node318046", "@target": "node318048"}}}, "nodeById": {"node318004": {"@root": true}, "node318005": {"@otu": "otu161988"}, "node318006": {}, "node318007": {}, "node318008": {"@otu": "otu161967"}, "node318009": {}, "node318010": {"@otu": "otu161969"}, "node318011": {"@otu": "otu161968"}, "node318012": {}, "node318013": {}, "node318014": {}, "node318015": {"@otu": "otu161973"}, "node318016": {"@otu": "otu161991"}, "node318017": {"@otu": "otu161993"}, "node318018": {"@otu": "otu161987"}, "node318019": {"@otu": "otu161996"}, "node318020": {"@otu": "otu161994"}, "node318021": {"@otu": "otu161977"}, "node318022": {"@otu": "otu161992"}, "node318023": {"@otu": "otu161989"}, "node318024": {"@otu": "otu161970"}, "node318025": {}, "node318026": {}, "node318027": {}, "node318028": {"@otu": "otu161972"}, "node318029": {"@otu": "otu161976"}, "node318030": {"@otu": "otu161997"}, "node318031": {"@otu": "otu161985"}, "node318032": {"@otu": "otu161981"}, "node318033": {"@otu": "otu161982"}, "node318034": {"@otu": "otu161998"}, "node318035": {"@otu": "otu161975"}, "node318036": {"@otu": "otu161984"}, "node318037": {"@otu": "otu161980"}, "node318038": {"@otu": "otu161979"}, "node318039": {"@otu": "otu161995"}, "node318040": {"@otu": "otu161990"}, "node318041": {"@otu": "otu161986"}, "node318042": {"@otu": "otu161999"}, "node318043": {"@otu": "otu161983"}, "node318044": {"@otu": "otu161978"}, "node318045": {"@otu": "otu161974"}, "node318046": {}, "node318047": {"@otu": "otu162000"}, "node318048": {"@otu": "otu161971"}}}, "tree620": {"@xsi:type": "nex:FloatTree", "^ot:branchLengthDescription": "", "^ot:branchLengthMode": "", "^ot:branchLengthTimeUnit": "", "^ot:curatedType": "MP, gpd", "^ot:inGroupClade": "node318051", "^ot:outGroupEdge": "", "^ot:rootNodeId": "node318049", "^ot:specifiedRoot": "", "^ot:tag": [], "edgeBySourceId": {"node318049": {"edge318050": {"@source": "node318049", "@target": "node318050"}, "edge318051": {"@source": "node318049", "@target": "node318051"}}, "node318051": {"edge318052": {"@source": "node318051", "@target": "node318052"}, "edge318057": {"@source": "node318051", "@target": "node318057"}}, "node318052": {"edge318053": {"@source": "node318052", "@target": "node318053"}, "edge318054": {"@source": "node318052", "@target": "node318054"}}, "node318054": {"edge318055": {"@source": "node318054", "@target": "node318055"}, "edge318056": {"@source": "node318054", "@target": "node318056"}}, "node318057": {"edge318058": {"@source": "node318057", "@target": "node318058"}, "edge318071": {"@source": "node318057", "@target": "node318071"}}, "node318058": {"edge318059": {"@source": "node318058", "@target": "node318059"}, "edge318060": {"@source": "node318058", "@target": "node318060"}, "edge318061": {"@source": "node318058", "@target": "node318061"}, "edge318062": {"@source": "node318058", "@target": "node318062"}, "edge318063": {"@source": "node318058", "@target": "node318063"}, "edge318064": {"@source": "node318058", "@target": "node318064"}, "edge318065": {"@source": "node318058", "@target": "node318065"}, "edge318066": {"@source": "node318058", "@target": "node318066"}, "edge318067": {"@source": "node318058", "@target": "node318067"}, "edge318068": {"@source": "node318058", "@target": "node318068"}, "edge318069": {"@source": "node318058", "@target": "node318069"}, "edge318070": {"@source": "node318058", "@target": "node318070"}}, "node318071": {"edge318072": {"@source": "node318071", "@target": "node318072"}, "edge318073": {"@source": "node318071", "@target": "node318073"}, "edge318074": {"@source": "node318071", "@target": "node318074"}, "edge318075": {"@source": "node318071", "@target": "node318075"}, "edge318076": {"@source": "node318071", "@target": "node318076"}, "edge318077": {"@source": "node318071", "@target": "node318077"}, "edge318078": {"@source": "node318071", "@target": "node318078"}, "edge318079": {"@source": "node318071", "@target": "node318079"}, "edge318080": {"@source": "node318071", "@target": "node318080"}, "edge318081": {"@source": "node318071", "@target": "node318081"}, "edge318082": {"@source": "node318071", "@target": "node318082"}, "edge318086": {"@source": "node318071", "@target": "node318086"}, "edge318087": {"@source": "node318071", "@target": "node318087"}, "edge318088": {"@source": "node318071", "@target": "node318088"}, "edge318089": {"@source": "node318071", "@target": "node318089"}, "edge318090": {"@source": "node318071", "@target": "node318090"}}, "node318082": {"edge318083": {"@source": "node318082", "@target": "node318083"}, "edge318084": {"@source": "node318082", "@target": "node318084"}, "edge318085": {"@source": "node318082", "@target": "node318085"}}}, "nodeById": {"node318049": {"@root": true}, "node318050": {"@otu": "otu161988"}, "node318051": {}, "node318052": {}, "node318053": {"@otu": "otu161967"}, "node318054": {}, "node318055": {"@otu": "otu161969"}, "node318056": {"@otu": "otu161968"}, "node318057": {}, "node318058": {}, "node318059": {"@otu": "otu161973"}, "node318060": {"@otu": "otu161991"}, "node318061": {"@otu": "otu161993"}, "node318062": {"@otu": "otu161987"}, "node318063": {"@otu": "otu161996"}, "node318064": {"@otu": "otu161994"}, "node318065": {"@otu": "otu161977"}, "node318066": {"@otu": "otu161992"}, "node318067": {"@otu": "otu161989"}, "node318068": {"@otu": "otu161970"}, "node318069": {"@otu": "otu161976"}, "node318070": {"@otu": "otu161998"}, "node318071": {}, "node318072": {"@otu": "otu161972"}, "node318073": {"@otu": "otu161997"}, "node318074": {"@otu": "otu161985"}, "node318075": {"@otu": "otu162000"}, "node318076": {"@otu": "otu161981"}, "node318077": {"@otu": "otu161982"}, "node318078": {"@otu": "otu161975"}, "node318079": {"@otu": "otu161984"}, "node318080": {"@otu": "otu161980"}, "node318081": {"@otu": "otu161971"}, "node318082": {}, "node318083": {"@otu": "otu161979"}, "node318084": {"@otu": "otu161995"}, "node318085": {"@otu": "otu161999"}, "node318086": {"@otu": "otu161990"}, "node318087": {"@otu": "otu161986"}, "node318088": {"@otu": "otu161974"}, "node318089": {"@otu": "otu161983"}, "node318090": {"@otu": "otu161978"}}}}}}}}, "branch2sha": {"master": "1bbbe21bdd9a32ef81abeb3f038a977fdc0e8e7b"}, "commentHTML": "", "duplicateStudyIDs": [], "shardName": "phylesystem-1", "versionHistory": [{"id": "d33fb39501605772a074dffc82affa5344ea9a94", "author_name": "Mark T. Holder", "author_email": "mtholder@gmail.com", "date": "Wed, 11 Jun 2014 22:18:34 -0500", "date_ISO_8601": "2014-06-11 22:18:34 -0500", "relative_date": "12 years ago", "message_subject": "corrected study ids"}, {"id": "593d6fbab385716dc0a12f3fc95133e8b7479b37", "author_name": "Mark T. Holder", "author_email": "mtholder@gmail.com", "date": "Tue, 29 Apr 2014 20:05:19 -0500", "date_ISO_8601": "2014-04-29 20:05:19 -0500", "relative_date": "12 years ago", "message_subject": "initial commit with phylografter files from 29 Apr, 2014"}]}